RNA–Protein interactions for RNA: ENST00000263857.10

POLR1A-201, Transcript of RNA polymerase I subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1A, Length 12,749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-201ENST00000263857 NFATC3Q12968 1075 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 TATDN3Q17R31 274 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 TEX261Q6UWH6 196 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 ZNF596Q8TC21 504 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 ATP5SQ99766 215 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 ARNT2Q9HBZ2 717 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 MRPL42Q9Y6G3 142 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 U3KQ87 197 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 YIF1AO95070 293 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 FGF4P08620 206 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 CBLP22681 906 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 FOXN2P32314 431 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 ACSM1Q08AH1 577 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 MGAT3Q09327 533 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 CDRT4Q8N9R6 151 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 FAM213BQ8TBF2 198 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 KCNE4Q8WWG9 221 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 SLC25A21Q9BQT8 299 aaPredicted RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 EBF4Q9BQW3 602 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 MED18Q9BUE0 208 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 MRPL22Q9NWU5 206 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 TIMP2P16035 220 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 CPOXP36551 454 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 C20orf85Q9H1P6 137 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 KCMF1Q9P0J7 381 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 STRAPQ9Y3F4 350 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 CEP170BQ9Y4F5 1589 aaPredicted RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 SMIM28A0A1B0GU29 152 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 DCAF7P61962 342 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 KEAP1Q14145 624 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 ZNF718Q3SXZ3 478 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 PRRT3Q5FWE3 981 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 HBMQ6B0K9 141 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 VASNQ6EMK4 673 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 BPIFCQ8NFQ6 507 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 COPS9Q8WXC6 57 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 REEP6Q96HR9 211 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 SLC2A9Q9NRM0 540 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 PCDHGC4Q9Y5F7 938 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 RPS17P08708 135 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 GRM2Q14416 872 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 C22orf39Q6P5X5 142 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 LRRC56Q8IYG6 542 aaPredicted RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 OR4E2Q8NGC2 313 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 SYNPRQ8TBG9 265 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 LMX1AQ8TE12 382 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 TIMD4Q96H15 378 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 EXOSC3Q9NQT5 275 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 CTXN2P0C2S0 81 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 GRPRP30550 384 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 LGALS4P56470 323 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 EARS2Q5JPH6 523 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 B3GNTL1Q67FW5 361 aaPredicted RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 BLOC1S3Q6QNY0 202 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 CATSPERGQ6ZRH7 1159 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 OR52E2Q8NGJ4 325 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 GGHQ92820 318 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 HSD17B14Q9BPX1 270 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 BABAM2Q9NXR7 383 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 ANKMY1Q9P2S6 941 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 OARD1Q9Y530 152 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 ERCC6L2Q5T890 1561 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 TRBV23OR9-2A0A075B6M9 112 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 MCRIP1C9JLW8 97 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 TNFRSF10AO00220 468 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 SCAMP2O15127 329 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 POP7O75817 140 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 GIFP27352 417 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 PRAMEF8Q5VWM4 474 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 PRAMEF7Q5VXH5 474 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 PLXDC1Q8IUK5 500 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 TMEM130Q8N3G9 435 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 DCAF4L2Q8NA75 395 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 TSLPQ969D9 159 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 BORCS6Q96GS4 357 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 LMF1Q96S06 567 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 TMEM175Q9BSA9 504 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 SEMA4GQ9NTN9 838 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 ACSS1Q9NUB1 689 aaPredicted RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 DNMT3BQ9UBC3 853 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 SRPK3Q9UPE1 567 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 ITGAMP11215 1152 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 HERVK_113P61574 105 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 FRMPD2BQ6IN97 320 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 CXCL17Q6UXB2 119 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 APH1BQ8WW43 257 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 ECHDC3Q96DC8 303 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 MBOAT4Q96T53 435 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 OCEL1Q9H607 264 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 PELI2Q9HAT8 420 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 IQSEC2Q5JU85 1478 aa6.33□□□□□ -1.4
POLR1A-201ENST00000263857 MTCL1Q9Y4B5 1905 aaKnown RBP6.33□□□□□ -1.4
POLR1A-201ENST00000263857 OR12D1P0DN82 309 aa6.32□□□□□ -1.4
POLR1A-201ENST00000263857 BMP2P12643 396 aa6.32□□□□□ -1.4
POLR1A-201ENST00000263857 SELEP16581 610 aa6.32□□□□□ -1.4
POLR1A-201ENST00000263857 ARL2P36404 184 aa6.32□□□□□ -1.4
POLR1A-201ENST00000263857 STT3AP46977 705 aa6.32□□□□□ -1.4
POLR1A-201ENST00000263857 EBPQ15125 230 aaKnown RBP6.32□□□□□ -1.4
POLR1A-201ENST00000263857 LCN8Q6JVE9 175 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 245.9 ms