RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Abcg5Q99PE8 652 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Nop16Q9CPT5 178 aaKnown RBP12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr716Q9EPG6 314 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Nrip3Q9JJR9 240 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 March7Q9WV66 693 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm5493S4R2D1 92 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm11634A0A1B0GSX1 172 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Dcaf4A0A1Y7VNZ0 532 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tmem233D3Z1U7 110 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Best1O88870 551 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cyr61P18406 379 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 GcgP55095 180 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tmem253Q3UNB8 204 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Pex11gQ6P6M5 241 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tas2r39Q7TQA5 319 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ubr7Q8BU04 425 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tmem62Q8BXJ9 643 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ncr1Q8C567 325 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gykl1Q8C635 549 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tmed4Q8R1V4 227 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr165Q8VFA2 313 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr1423Q8VFV0 310 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Q91V76 315 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Bex4Q9CWT2 118 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vmn1r40Q9EQ46 310 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Rhox2bA2A447 191 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Rhox2cA2AWL9 191 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm21560D3Z7A4 205 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Fbxw24E9PXM9 466 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm7233E9PZI8 198 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm9732F6QVC4 198 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm8104K7N744 198 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Hax1O35387 280 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 H2-ObO35424 271 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Arf3P61205 181 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 6430531B16RikQ3V2J1 307 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Igfbp7Q61581 281 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vamp1Q62442 118 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ccdc36Q6PDM4 574 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Zfp790Q80ZX2 779 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Lrrc39Q8BGI7 337 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Slc7a6Q8BGK6 515 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ctdsp2Q8BX07 270 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Kctd11Q8K485 232 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Q8R2K8 148 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ak6Q8VCP8 172 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Spaca1Q9DA48 305 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Alg2Q9DBE8 415 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cdc40Q9DC48 579 aaKnown RBP12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Twsg1Q9EP52 222 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Spo11Q9WTK8 396 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 AireQ9Z0E3 552 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Zfp68Q9Z116 606 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Igkv12-46A0A140T8P6 115 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Zfp934K7N6H3 473 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Muc13P19467 573 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Rack1P68040 317 aaKnown RBP12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Pde12Q3TIU4 608 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ankrd28Q505D1 1053 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Znf728Q6P5C7 752 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr774Q7TRI5 312 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Adgrd1Q80T32 903 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Sapcd1Q9CY86 146 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 ArntlQ9WTL8 632 aa12.96□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Zdbf2Q5SS00 2493 aaKnown RBP12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Cfap77A0A087WRI3 283 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Mterf1bB9EJ57 379 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Hoxd12P23812 268 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Cd28P31041 218 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Rps15P62843 145 aaKnown RBP12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Zfp41Q02526 198 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Gch1Q05915 241 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Mtf1Q07243 675 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Ptpn21Q62136 1176 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Kctd12Q6WVG3 327 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Ier5lQ99J55 406 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 P2ry12Q9CPV9 347 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Lap3Q9CPY7 519 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Gdpd1Q9CRY7 314 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Fam96bQ9D187 163 aa12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Zswim8Q3UHH1 1832 aaKnown RBP12.96□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Olfr1247A2AT78 314 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Tmem215A7E1Z1 235 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Vmn2r9K7N6Z8 848 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Slc6a18O88576 615 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 ArafP04627 604 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 BB287469Q3UT53 144 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Gls2Q571F8 602 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Cd53Q61451 219 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Mfsd13aQ6PDE8 519 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 JamlQ80UL9 379 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Stoml2Q99JB2 353 aaKnown RBP12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Ice1E9Q286 2241 aaKnown RBP12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Dlgap4B1AZP2 992 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Olfr740E9PV79 311 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Gm2056J3QQ02 144 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Cyp1a2P00186 513 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 En1P09065 401 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 Rap2bP61226 183 aa12.95□□□□□ -0.34
Pcdha1-202ENSMUST00000193839 GnrhrQ01776 327 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms