RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Slc16a5G5E8K6 468 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Agpat1O35083 285 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Klkb1P26262 638 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cry1P97784 606 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Dcp1bQ3U564 578 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmem255bQ5FW56 369 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Npr2Q6VVW5 1047 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Vmn1r189Q8K3N3 312 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ocel1Q8VCR9 219 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cd276Q8VE98 316 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Sav1Q8VEB2 386 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Pla2g15Q8VEB4 412 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ndrg3Q9QYF9 375 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Btbd35f28A2CFD5 498 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Skint10A7TZG1 354 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gm9008E9PVG0 424 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Btbd35f30J3QML3 498 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tas2r123P59528 333 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Hsd17b3P70385 305 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 2410002F23RikQ3TE80 284 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Grm7Q68ED2 915 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmem184bQ8BG09 407 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 NagpaQ8BJ48 517 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tgm4Q8BZH1 670 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Shisa7Q8C3Q5 558 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Casc3Q8K3W3 698 aaKnown RBP14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr165Q8VFA2 313 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr1417Q8VGJ6 315 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr644Q8VH21 314 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Klhl1Q9JI74 751 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Rgs6Q9Z2H2 472 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gm21936A0A1Y7VJE9 144 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gm14295A2BG91 834 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gm5519D3Z175 170 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Hoxd8P23463 289 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 St8sia4Q64692 359 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tas2r135Q7TQA9 312 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 WrbQ8K0D7 174 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 FntbQ8K2I1 437 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Noxo1Q8VCM2 349 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Med9Q8VCS6 142 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Spred2Q924S7 410 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 CrtapQ9CYD3 400 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Slc6a14Q9JMA9 638 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Eci2Q9WUR2 391 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr1032A2ATE5 310 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Il6P08505 211 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 RoraP51448 523 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Fv1P70213 459 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cxcr4P70658 359 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Sqstm1Q64337 442 aaKnown RBP14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cpeb2Q812E0 521 aaKnown RBP14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ubr7Q8BU04 425 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Rtn4ip1Q924D0 396 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cadm3Q99N28 396 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 9230104L09RikQ9D264 133 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Emc7Q9EP72 241 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 NpvfQ9ESQ8 188 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 AireQ9Z0E3 552 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cdc7Q9Z0H0 564 aa14.56□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Zdbf2Q5SS00 2493 aaKnown RBP14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 GmlE9PX31 176 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Btbd16E9Q173 522 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gfra2O08842 464 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Fcgr2P08101 330 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Rab5bP61021 215 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Defb41Q30KP6 65 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Bhlha9Q5RJB0 231 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Orm3Q63805 206 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Nox3Q672J9 568 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Prr5Q812A5 387 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tceal6Q9DB24 200 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cdc40Q9DC48 579 aaKnown RBP14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr930Q9EQ99 308 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cyp11a1Q9QZ82 526 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 SktA2AQ25 1946 aaKnown RBP14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmem235B1AQL3 211 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 TertO70372 1122 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Galr2O88854 371 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Slc9a3r1P70441 355 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Arntl2Q2VPD4 579 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Taar2Q5QD17 339 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Polr2mQ6P6I6 366 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Entpd8Q8K0L2 497 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr1094Q8VF13 330 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Pycr1Q922W5 309 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Q9D1K7 174 aaKnown RBP14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Stra6lQ9DBN1 621 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Nrip3Q9JJR9 240 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 PhipQ8VDD9 1821 aaKnown RBP14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Trbv20A0A0B4J1H5 111 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Fam84bD3YXJ5 310 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tspan6O70401 245 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 ArafP04627 604 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 ErgP81270 486 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cln6Q3U466 308 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 XkrxQ5GH68 449 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 AntxrlQ8BVM2 641 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tmem163Q8C996 288 aa14.55□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cml2Q8CHQ9 238 aa14.55□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms