RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 PROK2Q9HC23 129 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ARL15Q9NXU5 204 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ASIC5Q9NY37 505 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 NUDT4Q9NZJ9 180 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 TRMT6Q9UJA5 497 aaKnown RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 DAPP1Q9UN19 280 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 MAPRE3Q9UPY8 281 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 IFT52Q9Y366 437 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 TSC22D4Q9Y3Q8 395 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 SPACA6W5XKT8 324 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ANKDD1BA6NHY2 528 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CENPBD1B2RD01 187 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 BOLA2-SMG1P6H3BVE0 249 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 UPK1AO00322 258 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 SLC1A7O00341 560 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ERI3O43414 337 aaKnown RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 TRIM3O75382 744 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CLEC3AO75596 197 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 GABARAPO95166 117 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 OTCP00480 354 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CRHP06850 196 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 C1GALT1C1LP0DN25 315 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CYP4B1P13584 511 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 MTHFD2P13995 350 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CRYGSP22914 178 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 KCNC1P48547 511 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 PIK3CGP48736 1102 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CDKN2DP55273 166 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CDH13P55290 713 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 DEFA1P59665 94 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 DEFA3P59666 94 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 IL2P60568 153 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ISL1P61371 349 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 PHC1P78364 1004 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 REEP5Q00765 189 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 TEKQ02763 1124 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 PCDH1Q08174 1060 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 SELPLGQ14242 412 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CAPRIN1Q14444 709 aaKnown RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ETFDHQ16134 617 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 NTRK2Q16620 822 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 HIST2H2ACQ16777 129 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 CHRFAM7AQ494W8 412 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ANKDD1AQ495B1 522 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 PAGE3Q5JUK9 113 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 OTUD3Q5T2D3 398 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 SYT6Q5T7P8 510 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ATAD3BQ5T9A4 648 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 PRAMEF20Q5VT98 475 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 SLX4IPQ5VYV7 408 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 TRIM40Q6P9F5 258 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 PAQR3Q6TCH7 311 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ENPP6Q6UWR7 440 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 TMIGD1Q6UXZ0 262 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 DLEU7Q6UYE1 221 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 MBOAT1Q6ZNC8 495 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 PLEKHG7Q6ZR37 379 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 GPRIN3Q6ZVF9 776 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 LUZP2Q86TE4 346 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 TSPYL5Q86VY4 417 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 THOC6Q86W42 341 aaKnown RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 GPSM1Q86YR5 675 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ARMC8Q8IUR7 673 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 OFCC1Q8IZS5 231 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 TAGAPQ8N103 731 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 KRT78Q8N1N4 520 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF321PQ8N8H1 164 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 FNDC5Q8NAU1 212 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 BPIFB6Q8NFQ5 453 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 OR2T12Q8NG77 320 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 OR2L5Q8NG80 312 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 OR6Q1Q8NGQ2 317 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 METTL6Q8TCB7 284 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 FBLIM1Q8WUP2 373 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 TMEM171Q8WVE6 324 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 DIO2Q92813 273 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 TANKQ92844 425 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 MS4A6EQ96DS6 147 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 PIK3IP1Q96FE7 263 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 SLC47A1Q96FL8 570 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 REXO5Q96IC2 774 aaKnown RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 DMRTB1Q96MA1 342 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF583Q96ND8 569 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 WFIKKN1Q96NZ8 548 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 SLC39A3Q9BRY0 314 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 REXO4Q9GZR2 422 aaKnown RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 GABARAPL1Q9H0R8 117 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 SPNS1Q9H2V7 528 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 TOR3AQ9H497 397 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 DUSP21Q9H596 190 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 UBTD1Q9HAC8 227 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 NTN4Q9HB63 628 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 TNFRSF12AQ9NP84 129 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 AKIP1Q9NQ31 210 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF701Q9NV72 531 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ELOVL5Q9NYP7 299 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 WWOXQ9NZC7 414 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 NPAP1Q9NZP6 1156 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 ADGRE2Q9UHX3 823 aa5.41□□□□□ -1.54
CPSF7-219ENST00000539952 MKLN1Q9UL63 735 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms