RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 A0A1W2PPL8 197 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 ARRDC5A6NEK1 342 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 C5orf67F2Z3F1 127 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 NME6O75414 186 aaPredicted RBP8.49□□□□□ -1.05
TOP1-201ENST00000361337 LIMS3P0CW19 117 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 LIMS4P0CW20 117 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 SRSF5Q13243 272 aaKnown RBP8.49□□□□□ -1.05
TOP1-201ENST00000361337 NTRK2Q16620 822 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 BEX5Q5H9J7 111 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 PRAMEF13Q5VWM6 474 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 RAB12Q6IQ22 244 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 DUSP18Q8NEJ0 188 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 TEX47Q8TBZ9 253 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 ATOH1Q92858 354 aaPredicted RBP8.49□□□□□ -1.05
TOP1-201ENST00000361337 MRGPRX3Q96LB0 322 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 MRGPRX1Q96LB2 322 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 USB1Q9BQ65 265 aaKnown RBP8.49□□□□□ -1.05
TOP1-201ENST00000361337 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.49□□□□□ -1.05
TOP1-201ENST00000361337 NIPAL2Q9H841 368 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 FGF22Q9HCT0 170 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 DMRT3Q9NQL9 472 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 KLHL42Q9P2K6 505 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 IL20RAQ9UHF4 553 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 A4GNTQ9UNA3 340 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 A0A0A6YYJ9 748 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 SLC16A5O15375 505 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 CSN2P05814 226 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 CISD3P0C7P0 127 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 GIPRP48546 466 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 CENPAP49450 140 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 EVX1P49640 407 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 LINGO2Q7L985 606 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 SLC16A13Q7RTY0 426 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 ADGRF3Q8IZF5 1079 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 OR56A3Q8NH54 315 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 MOSPD2Q8NHP6 518 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 ACOT12Q8WYK0 555 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 ECHDC3Q96DC8 303 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 LRIG1Q96JA1 1093 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 MARVELD1Q9BSK0 173 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 IFT22Q9H7X7 185 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 MAN2C1Q9NTJ4 1040 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 HRASLS2Q9NWW9 162 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 CDH10Q9Y6N8 788 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 TEX13CA0A0J9YWL9 993 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 UBE2QL1A1L167 161 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 SOX1O00570 391 aaPredicted RBP8.49□□□□□ -1.05
TOP1-201ENST00000361337 EPPINO95925 133 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 HLA-DQB1P01920 261 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 ELK1P19419 428 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 DRD1P21728 446 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 SRP9P49458 86 aaKnown RBP8.49□□□□□ -1.05
TOP1-201ENST00000361337 ZNF33BQ06732 778 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 ZNF791Q3KP31 576 aaPredicted RBP8.49□□□□□ -1.05
TOP1-201ENST00000361337 TIGD3Q6B0B8 471 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 TMEM91Q6ZNR0 172 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 SFTPA2Q8IWL1 248 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 OR8D4Q8NGM9 314 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 FANK1Q8TC84 345 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 F2RL3Q96RI0 385 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 KCNJ15Q99712 375 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 APOOQ9BUR5 198 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 APOBEC3BQ9UH17 382 aaKnown RBP8.49□□□□□ -1.05
TOP1-201ENST00000361337 ENOPH1Q9UHY7 261 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 FBXL2Q9UKC9 423 aa8.49□□□□□ -1.05
TOP1-201ENST00000361337 ZFR2Q9UPR6 939 aaKnown RBP8.49□□□□□ -1.05
TOP1-201ENST00000361337 PCDHGA9Q9Y5G4 932 aaKnown RBP8.49□□□□□ -1.05
TOP1-201ENST00000361337 HMGN4O00479 90 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 ERI3O43414 337 aaKnown RBP8.48□□□□□ -1.05
TOP1-201ENST00000361337 PROM1O43490 865 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 SOD1P00441 154 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 CD3GP09693 182 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 LINC00271P0C7V0 271 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 HSD3B1P14060 373 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 HSD3B2P26439 372 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 EPHA5P54756 1037 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 VASNQ6EMK4 673 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 CREB3L2Q70SY1 520 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 TRILQ7L0X0 811 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 DPPA4Q7L190 304 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 FAM26EQ8N5C1 309 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 ZNF655Q8N720 491 aaPredicted RBP8.48□□□□□ -1.05
TOP1-201ENST00000361337 OR4K5Q8NGD3 323 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 TMEM163Q8TC26 289 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 ELSPBP1Q96BH3 223 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 DNAJA3Q96EY1 480 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 CACNG6Q9BXT2 260 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 AP1M2Q9Y6Q5 423 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 RHPN2P1A8MT19 583 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 NDUFS4O43181 175 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 FRS3O43559 492 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 KCNJ13O60928 360 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 CXCL3P19876 107 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 EFNB1P98172 346 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 RGS1Q08116 209 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 GPR176Q14439 515 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 SMARCD3Q6STE5 483 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 FOXRED2Q8IWF2 684 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 OR4N5Q8IXE1 308 aa8.48□□□□□ -1.05
TOP1-201ENST00000361337 BBS1Q8NFJ9 593 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms