RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Kcne5Q9QZ26 143 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Capns1O88456 269 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Hoxc8P09025 242 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Timp2P25785 220 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Opn1swP51491 346 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tmem248Q3TBN1 314 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Crtc2Q3U182 692 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Arhgef39Q66JY6 344 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Zik1Q80YP6 463 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Lrrc39Q8BGI7 337 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 NaxeQ8K4Z3 282 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Slc9a3r2Q9JHL1 337 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Plek2Q9WV52 353 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r49D3Z6L3 852 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r32K7N686 852 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn1r86L7N213 316 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Pcmt1P23506 227 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Slc11a1P41251 548 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vamp2P63044 116 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Eml4Q3UMY5 988 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Slc22a22Q8R0S9 554 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Smim23Q9DAL0 136 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Nr4a3Q9QZB6 627 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Psma1Q9R1P4 263 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r34E9PVI0 852 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r41E9Q5C7 852 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr730E9Q8M3 318 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r40F6W043 852 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r37F8VQD3 802 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr190K7N5T5 307 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r36K7N741 852 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Mc3rP33033 323 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cdh11P55288 796 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Bcl2a1cQ0P538 128 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tmem38aQ3TMP8 298 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Dvl3Q61062 716 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Mvb12aQ78HU3 271 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr1275Q7TQY8 312 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 CblcQ80XL1 496 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Zdhhc1Q8R0N9 484 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr516Q8VFZ5 314 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ndufb2Q9CPU2 105 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Otub2Q9CQX0 234 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 H2afb1S4R1E0 115 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 H2afb3S4R1G7 115 aa14.62□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Adrb1P34971 466 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 HgfQ08048 728 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Snx33Q4VAA7 574 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Bod1Q5SQY2 173 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Acvr1bQ61271 505 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tmbim1Q8BJZ3 309 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Fem1abQ8C0T1 654 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Nadk2Q8C5H8 452 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Ccm2lQ8VCC6 481 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr437Q8VEV1 310 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Impa2Q91UZ5 290 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Lpcat2bQ9D5U0 516 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Znrf4Q9DAH2 327 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Kiaa0100Q5SYL3 2234 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 BC034090A0A087WP46 1202 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gm5788A0A1Y7VK80 144 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cd300ld4A2A7W1 245 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Zfp993A2A8V4 313 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Efna3O08545 230 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Fbxo31Q3TQF0 507 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr12Q60894 333 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vamp1Q62442 118 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cd300ld3Q6SJQ5 245 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Mgat4aQ812G0 535 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Znf770Q8BIQ8 705 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr1263Q8VG63 306 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Lingo1Q9D1T0 614 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Col4a3Q9QZS0 1669 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gm6803J3QPI8 144 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Foxk1P42128 719 aaKnown RBP14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gfi1P70338 423 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Them4Q3UUI3 230 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Grxcr1Q50H32 290 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Dcdc2Q5DU00 475 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Grhl3Q5FWH3 603 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Dcaf12l2Q8BGW4 469 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Prps1l1Q8C5R8 318 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Q8K039 155 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn1r201Q8R262 300 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 McatQ8R3F5 381 aaKnown RBP14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 NpntQ91V88 561 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Adam33Q923W9 797 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Mrps18bQ99N84 254 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 MtapQ9CQ65 283 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Mdm1Q9D067 708 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Clca3a2Q9EQR4 902 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tm9sf3Q9ET30 587 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Clca3a1Q9QX15 902 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Spats1A2RRY8 269 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Hax1O35387 280 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Matn3O35701 481 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Znf703P0CL69 594 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Bdkrb2P32299 392 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 SgcdP82347 289 aa14.61□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Clec9aQ8BRU4 238 aa14.61□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms