RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Pycr3Q9DCC4 274 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Skp1Q9WTX5 163 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Prune2Q52KR3 3084 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr1338A2ACY7 313 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm14418A2ARR6 358 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm14322A2AW66 358 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Rhox1B1APN4 224 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 9630041A04RikD3Z3U4 205 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Wdr25E9Q349 535 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm17728E9Q5K2 132 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ighg2cF6TQW2 404 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Sh3yl1O08641 340 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cyp4a10O88833 509 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 P01864 335 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 LckP06240 509 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cdx2P43241 311 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 S100a13P97352 98 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Smim24Q0VG18 120 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Mapk10Q61831 464 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Clec7aQ6QLQ4 244 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Timd4Q6U7R4 343 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr744Q7TRM0 323 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ska3Q8C263 411 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Q8C784 167 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Hrasls5Q9CPX5 270 aa13.71□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr1034A0A1L1ST14 310 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Hpse2B2RY83 592 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Mthfd2lD3YZG8 338 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gm8159E9Q0R1 267 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gpr137cE9Q343 423 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Cdc42P60766 191 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Cep76Q0VEJ0 659 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Wfdc5Q4KXB6 126 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Methig1Q76I26 264 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Rsbn1Q80T69 795 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Slitrk5Q810B7 957 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Q8BPC6 396 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Q8R3Y5 413 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Rbms2Q8VC70 383 aaKnown RBP13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Olfr572Q8VGZ3 318 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Acy1Q99JW2 408 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 SmoxQ99K82 555 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Rcbtb2Q99LJ7 551 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 MmadhcQ99LS1 296 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Chmp1b1Q99LU0 199 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Metap1dQ9CPW9 335 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Mdm1Q9D067 708 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Tcf23Q9JLR5 209 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Olfr71Q9QZ18 312 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Enpp2Q9R1E6 862 aa13.71□□□□□ -0.22
Nup88-202ENSMUST00000108530 Ckap5A2AGT5 2032 aaKnown RBP13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Fbxw24E9PXM9 466 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Olfr574F8VQ18 346 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Slc22a1O08966 556 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Tcn2O88968 430 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 TpoP35419 914 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Nkx2-2P42586 273 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 GlaP51569 419 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 ErfP70459 551 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 P2rx3Q3UR32 397 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Pydc3Q3V3Q4 588 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Zscan26Q5RJ54 466 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Fam169aQ5XG69 665 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Adgrd1Q80T32 903 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Ntf4Q80VU4 209 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Spag1Q80ZX8 901 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Cxcl16Q8BSU2 246 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 PxkQ8BX57 582 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Satb2Q8VI24 733 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Kiss1rQ91V45 396 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Mrgprb4Q91ZC0 321 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Fam166aQ9D4K5 319 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Upk3bl1Q9D701 249 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Ppa1Q9D819 289 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 MyotQ9JIF9 496 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Bmp10Q9R229 421 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 Loxhd1C8YR32 2068 aa13.7□□□□□ -0.22
Nup88-202ENSMUST00000108530 A0A286YD13 301 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Cd300ld4A2A7W1 245 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Angpt1O08538 498 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 IlkO55222 452 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 DckP43346 260 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Lsm3P62311 102 aaKnown RBP13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Pak6Q3ULB5 682 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Cobll1Q3UMF0 1273 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 RasefQ5RI75 627 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Dag1Q62165 893 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Lpcat4Q6NVG1 524 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Cd300ld3Q6SJQ5 245 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Sult2a8Q8BGL3 282 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Lhfpl6Q8BM86 200 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Lrrc25Q8K1T1 297 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Crb3Q8QZT4 113 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Vmp1Q99KU0 406 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Q9CR55 154 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Zdhhc13Q9CWU2 622 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 BlvraQ9CY64 295 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Tmem38bQ9DAV9 292 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Bbs10Q9DBI2 713 aa13.69□□□□□ -0.22
Nup88-202ENSMUST00000108530 Cnot9Q9JKY0 299 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms