Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Gm25239-201ENSMUST00000174915 86 ntBASIC35.13■■■■□ 3.21
Sh3yl1O08641 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Sh3yl1O08641 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Sh3yl1O08641 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Sh3yl1O08641 Gm15042-201ENSMUST00000120212 883 ntBASIC30.87■■■□□ 2.53
Sh3yl1O08641 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Sh3yl1O08641 Gm24109-201ENSMUST00000175489 103 ntBASIC30.36■■■□□ 2.45
Sh3yl1O08641 Gm15045-201ENSMUST00000117359 883 ntBASIC30.24■■■□□ 2.43
Sh3yl1O08641 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Sh3yl1O08641 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Sh3yl1O08641 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Sh3yl1O08641 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Sh3yl1O08641 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Sh3yl1O08641 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Sh3yl1O08641 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Sh3yl1O08641 Psd-208ENSMUST00000224556 2034 ntBASIC29.37■■■□□ 2.29
Sh3yl1O08641 Gm23366-201ENSMUST00000175022 89 ntBASIC29.35■■■□□ 2.29
Sh3yl1O08641 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Sh3yl1O08641 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.04■■■□□ 2.24
Sh3yl1O08641 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Sh3yl1O08641 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Sh3yl1O08641 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Sh3yl1O08641 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Sh3yl1O08641 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Sh3yl1O08641 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Sh3yl1O08641 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
Sh3yl1O08641 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Sh3yl1O08641 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Sh3yl1O08641 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.37■■■□□ 2.13
Sh3yl1O08641 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.32■■■□□ 2.12
Sh3yl1O08641 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Sh3yl1O08641 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.14■■■□□ 2.1
Sh3yl1O08641 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Sh3yl1O08641 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sh3yl1O08641 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Sh3yl1O08641 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sh3yl1O08641 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.91■■■□□ 2.06
Sh3yl1O08641 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.9■■■□□ 2.06
Sh3yl1O08641 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sh3yl1O08641 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sh3yl1O08641 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Sh3yl1O08641 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sh3yl1O08641 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sh3yl1O08641 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Sh3yl1O08641 Gm25238-201ENSMUST00000174914 89 ntBASIC27.69■■■□□ 2.02
Sh3yl1O08641 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.59■■■□□ 2.01
Sh3yl1O08641 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.55■■■□□ 2
Sh3yl1O08641 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Sh3yl1O08641 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Sh3yl1O08641 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Sh3yl1O08641 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.36■■□□□ 1.97
Sh3yl1O08641 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Sh3yl1O08641 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Sh3yl1O08641 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Sh3yl1O08641 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Sh3yl1O08641 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.21■■□□□ 1.95
Sh3yl1O08641 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Sh3yl1O08641 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Sh3yl1O08641 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.11■■□□□ 1.93
Sh3yl1O08641 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
Sh3yl1O08641 Gm27325-201ENSMUST00000175467 74 ntBASIC27.09■■□□□ 1.93
Sh3yl1O08641 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
Sh3yl1O08641 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Sh3yl1O08641 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Sh3yl1O08641 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Sh3yl1O08641 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.87■■□□□ 1.89
Sh3yl1O08641 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.87■■□□□ 1.89
Sh3yl1O08641 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Sh3yl1O08641 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Sh3yl1O08641 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.82■■□□□ 1.88
Sh3yl1O08641 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.78■■□□□ 1.88
Sh3yl1O08641 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.76■■□□□ 1.87
Sh3yl1O08641 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sh3yl1O08641 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.74■■□□□ 1.87
Sh3yl1O08641 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sh3yl1O08641 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Sh3yl1O08641 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sh3yl1O08641 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.66■■□□□ 1.86
Sh3yl1O08641 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sh3yl1O08641 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Sh3yl1O08641 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sh3yl1O08641 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Sh3yl1O08641 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Sh3yl1O08641 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sh3yl1O08641 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.49■■□□□ 1.83
Sh3yl1O08641 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sh3yl1O08641 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sh3yl1O08641 Rab21-202ENSMUST00000218831 843 ntBASIC26.45■■□□□ 1.82
Sh3yl1O08641 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Sh3yl1O08641 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.39■■□□□ 1.82
Sh3yl1O08641 Gm25262-201ENSMUST00000174934 133 ntBASIC26.39■■□□□ 1.82
Sh3yl1O08641 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sh3yl1O08641 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.35■■□□□ 1.81
Sh3yl1O08641 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sh3yl1O08641 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sh3yl1O08641 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Sh3yl1O08641 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Sh3yl1O08641 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.15■■□□□ 1.78
Sh3yl1O08641 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Sh3yl1O08641 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms