Protein–RNA interactions for Protein: Q8BPC6

Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BPC6 Gm25239-201ENSMUST00000174915 86 ntBASIC33.57■■■□□ 2.96
Q8BPC6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Q8BPC6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Q8BPC6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Q8BPC6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
Q8BPC6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Q8BPC6 Gm15042-201ENSMUST00000120212 883 ntBASIC29.86■■■□□ 2.37
Q8BPC6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Q8BPC6 Psd-208ENSMUST00000224556 2034 ntBASIC29.32■■■□□ 2.28
Q8BPC6 Gm15045-201ENSMUST00000117359 883 ntBASIC29.25■■■□□ 2.27
Q8BPC6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Q8BPC6 Gm24109-201ENSMUST00000175489 103 ntBASIC28.84■■■□□ 2.21
Q8BPC6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Q8BPC6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.77■■■□□ 2.2
Q8BPC6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Q8BPC6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Q8BPC6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Q8BPC6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Q8BPC6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Q8BPC6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Q8BPC6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Q8BPC6 Gm23366-201ENSMUST00000175022 89 ntBASIC28.13■■■□□ 2.09
Q8BPC6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Q8BPC6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Q8BPC6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Q8BPC6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
Q8BPC6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Q8BPC6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28■■■□□ 2.07
Q8BPC6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Q8BPC6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Q8BPC6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Q8BPC6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Q8BPC6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.72■■■□□ 2.03
Q8BPC6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Q8BPC6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Q8BPC6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Q8BPC6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Q8BPC6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.41■■□□□ 1.98
Q8BPC6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Q8BPC6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Q8BPC6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.23■■□□□ 1.95
Q8BPC6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Q8BPC6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Q8BPC6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27■■□□□ 1.91
Q8BPC6 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.97■■□□□ 1.91
Q8BPC6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Q8BPC6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Q8BPC6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Q8BPC6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Q8BPC6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Q8BPC6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Q8BPC6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.64■■□□□ 1.86
Q8BPC6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Q8BPC6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Q8BPC6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Q8BPC6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Q8BPC6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Q8BPC6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.42■■□□□ 1.82
Q8BPC6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Q8BPC6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Q8BPC6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
Q8BPC6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Q8BPC6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Q8BPC6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Q8BPC6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
Q8BPC6 Gm25238-201ENSMUST00000174914 89 ntBASIC26.3■■□□□ 1.8
Q8BPC6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.28■■□□□ 1.8
Q8BPC6 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.26■■□□□ 1.79
Q8BPC6 Gm27325-201ENSMUST00000175467 74 ntBASIC26.25■■□□□ 1.79
Q8BPC6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.25■■□□□ 1.79
Q8BPC6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.15■■□□□ 1.78
Q8BPC6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Q8BPC6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Q8BPC6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Q8BPC6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Q8BPC6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.05■■□□□ 1.76
Q8BPC6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Q8BPC6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Q8BPC6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
Q8BPC6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Q8BPC6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Q8BPC6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Q8BPC6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Q8BPC6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Q8BPC6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Q8BPC6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Q8BPC6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Q8BPC6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Q8BPC6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.7■■□□□ 1.7
Q8BPC6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.69■■□□□ 1.7
Q8BPC6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Q8BPC6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Q8BPC6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.64■■□□□ 1.7
Q8BPC6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Q8BPC6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Q8BPC6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Q8BPC6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Q8BPC6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Q8BPC6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Q8BPC6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms