RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 GDF7Q7Z4P5 450 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 SATL1Q86VE3 508 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 CYP4Z2PQ8N1L4 340 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 SLC43A2Q8N370 569 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 OR5L2Q8NGL0 311 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 RHOXF1Q8NHV9 184 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 RNF217Q8TC41 542 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 DOK4Q8TEW6 326 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 ZNF721Q8TF20 911 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-214ENST00000495485 DNAJA4Q8WW22 397 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-214ENST00000495485 FCGR1BQ92637 280 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 TP53INP1Q96A56 240 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 NACC2Q96BF6 587 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 SLC38A2Q96QD8 506 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 FUZQ9BT04 418 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 GPR87Q9BY21 358 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 ITPAQ9BY32 194 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 SLC26A1Q9H2B4 701 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 WDR54Q9H977 334 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 RLIMQ9NVW2 624 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 PADI1Q9ULC6 663 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 SLC7A7Q9UM01 511 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 SSUH2Q9Y2M2 353 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 PCDHGA6Q9Y5G7 932 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 CLDN16Q9Y5I7 305 aa9.46□□□□□ -0.9
HDAC3-214ENST00000495485 TLN1Q9Y490 2541 aaKnown RBP9.45□□□□□ -0.9
HDAC3-214ENST00000495485 A0A087WUU8 490 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 EFCAB10A6NFE3 127 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 SERINC4A6NH21 518 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 C1QTNF9BB2RNN3 333 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 PTGES3LE9PB15 166 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 E9PQ18 207 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 ZNF701M0R085 212 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-214ENST00000495485 PEX12O00623 359 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 TO15178 435 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 RGS10O43665 173 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 TPST2O60704 377 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 ALOX12BO75342 701 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 REM1O75628 298 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 ZIC2O95409 532 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-214ENST00000495485 DDAH2O95865 285 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 IGHEP01854 428 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 IGKV3-11P04433 115 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 RAB40ALP0C0E4 278 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 C1QTNF9P0C862 333 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 MMP11P24347 488 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 CHMP24386 653 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 FPR3P25089 353 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 EIF2S3P41091 472 aaKnown RBP9.45□□□□□ -0.9
HDAC3-214ENST00000495485 SLC6A8P48029 635 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 GPR143P51810 404 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 PNLIPRP2P54317 469 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 FOXD4Q12950 439 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-214ENST00000495485 NPTX1Q15818 432 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 NADK2Q4G0N4 442 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 SLX4IPQ5VYV7 408 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 ANKRD34AQ69YU3 496 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 PWWP2BQ6NUJ5 590 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 ULK3Q6PHR2 472 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 KCTD8Q6ZWB6 473 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 OLIG3Q7RTU3 272 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 ENTHD1Q8IYW4 607 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 ALDH16A1Q8IZ83 802 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 SLC34A3Q8N130 599 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 IL22RA1Q8N6P7 574 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 CLDN22Q8N7P3 220 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 LSMEM1Q8N8F7 131 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 ZSCAN1Q8NBB4 408 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 SIMC1Q8NDZ2 872 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 OR52L1Q8NGH7 329 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 OR8J1Q8NGP2 316 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 OR8K3Q8NH51 312 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 CNIH3Q8TBE1 160 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 PLEKHA8Q96JA3 519 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 LPAR4Q99677 370 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 NDEL1Q9GZM8 345 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 CCDC90BQ9GZT6 254 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 EXOSC3Q9NQT5 275 aaKnown RBP9.45□□□□□ -0.9
HDAC3-214ENST00000495485 RASSF1Q9NS23 344 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 MED31Q9Y3C7 131 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 PCDHGB1Q9Y5G3 927 aa9.45□□□□□ -0.9
HDAC3-214ENST00000495485 CHD6Q8TD26 2715 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 PIEZO2Q9H5I5 2752 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 LOC400499M0QZD8 3231 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 A0A1W2PQD3 144 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 SAGE2PA6NJ88 616 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 VSTM2BA6NLU5 285 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 CLCA1A8K7I4 914 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 IDSB3KWA1 339 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 MEN1O00255 615 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 CHP2O43745 196 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 RAD1O60671 282 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 PPM1BO75688 479 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 RCBTB2O95199 551 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 HMGN1P05114 100 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 NGFRP08138 427 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 LINGO3P0C6S8 592 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 ATXN8OSP0DMR3 200 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 BMP7P18075 431 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms