RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 RPS19P39019 145 aaKnown RBP14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 DDOSTP39656 456 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 EMDP50402 254 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 OR1Q1Q15612 314 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 GJD3Q8N144 294 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 ARL14Q8N4G2 192 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 PROKR2Q8NFJ6 384 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 GRHL3Q8TE85 626 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 CNOT9Q92600 299 aaKnown RBP14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 MAP6Q96JE9 813 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 FOXQ1Q9C009 403 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 IL20Q9NYY1 176 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 CLDN16Q9Y5I7 305 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 SMIM30A4D0T7 59 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 KDM4EB2RXH2 506 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 SOCS6O14544 535 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 PLD2O14939 933 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 OR10H2O60403 315 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 BRINP1O60477 761 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 RFPL3O75679 317 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 LIMS3P0CW19 117 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 LIMS4P0CW20 117 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 SRFP11831 508 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 GLULP15104 373 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 NAGAP17050 411 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 GTF2E2P29084 291 aaKnown RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 IFNGR2P38484 337 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 GCGRP47871 477 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 OR3A3P47888 321 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 MTNR1AP48039 350 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 PRTGQ2VWP7 1150 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 PGGHGQ32M88 737 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 PDZK1Q5T2W1 519 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 IL17RDQ8NFM7 739 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 LMX1AQ8TE12 382 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 GATAD2BQ8WXI9 593 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 ASPNQ9BXN1 380 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 PRDM9Q9NQV7 894 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 ZNF223Q9UK11 482 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 TEX51A0A1B0GUA7 166 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 SHOXO15266 292 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 DBIP07108 87 aaKnown RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 MAOAP21397 527 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 IL32P24001 234 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 AP2S1P53680 142 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 OR2B6P58173 313 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 POU6F2P78424 691 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 CSTF1Q05048 431 aaKnown RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 FZD5Q13467 585 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 MINDY4Q4G0A6 757 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 AADACL4Q5VUY2 407 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 LHFPL3Q86UP9 236 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 SYT14Q8NB59 555 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 PTCHD1Q96NR3 888 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 STACQ99469 402 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 RACGAP1Q9H0H5 632 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 TRIM45Q9H8W5 580 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 MED20Q9H944 212 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 HINT3Q9NQE9 182 aaKnown RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 SPIN1Q9Y657 262 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 CDH10Q9Y6N8 788 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 DMDP11532 3685 aa14.05□□□□□ -0.16
SCAMP4-202ENST00000409472 TRAPPC13A5PLN9 417 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 ERVH48-1M5A8F1 160 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 SPNP16150 400 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 CAPZBP47756 277 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 CDH11P55287 796 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 RPS25P62851 125 aaKnown RBP14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 MXD1Q05195 221 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 MLLT11Q13015 90 aaPredicted RBP14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 NDUFAF6Q330K2 333 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 EIPR1Q53HC9 387 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 SMARCD3Q6STE5 483 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 NPSR1Q6W5P4 371 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 THSD4Q6ZMP0 1018 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 RANBP3LQ86VV4 465 aaPredicted RBP14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 GATAD2AQ86YP4 633 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 PARP16Q8N5Y8 322 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 NR4A3Q92570 626 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 SPACA7Q96KW9 195 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 SLC38A2Q96QD8 506 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 DCLRE1CQ96SD1 692 aaKnown RBP14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 HCAR1Q9BXC0 346 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 FLRT3Q9NZU0 649 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 HRO43593 1189 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 CLEC2LP0C7M8 214 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 SLC35E2P0CK97 266 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 ENPP1P22413 925 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 STAT5AP42229 794 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 HTR3AP46098 478 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 PPM1FP49593 454 aaPredicted RBP14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 ZNF45Q02386 682 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 DEFB133Q30KQ1 61 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 C3orf38Q5JPI3 329 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 MANEAQ5SRI9 462 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 SLC35F1Q5T1Q4 408 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 NKAIN2Q5VXU1 208 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 FCRLBQ6BAA4 426 aa14.04□□□□□ -0.16
SCAMP4-202ENST00000409472 CADM2Q8N3J6 435 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms