RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 9130023H24RikQ8BG98 337 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 NapepldQ8BH82 396 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Nceh1Q8BLF1 408 aaKnown RBP13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Dusp28Q8BTR5 163 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 LdahQ8BVA5 326 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Lypd4Q8BVP6 246 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 MaobQ8BW75 520 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Spata33Q8C624 132 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pqlc3Q8C6U2 202 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Iglon5Q8HW98 336 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 NotumQ8R116 503 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn1r89Q8R256 316 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cdhr5Q8VHF2 831 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Clca3a1Q9QX15 902 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr625-ps1A0A140T8L4 321 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ajap1A2ALI5 412 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Sult2a6B2RVI8 285 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Hcn1O88704 910 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 InaP46660 501 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 StarP51557 284 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Dcp1bQ3U564 578 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc5a12Q49B93 619 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ugt2a2Q6PDD0 528 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr527Q7TRT9 305 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Mfn2Q80U63 757 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pou6f2Q8BJI4 691 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Glt28d2Q8BML3 165 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Esrp2Q8K0G8 717 aaKnown RBP13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Plac9Q8K262 108 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr617Q8VGA1 318 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr160Q8VGE3 309 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr584Q8VGW0 319 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr649Q8VGW1 312 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Lrg1Q91XL1 342 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Imp3Q921Y2 184 aaKnown RBP13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Serpinb11Q9CQV3 388 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Exosc1Q9DAA6 195 aaKnown RBP13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc25a18Q9DB41 320 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Isoc2bQ9DCC7 210 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gpr88Q9EPB7 384 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn1r40Q9EQ46 310 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pdzk1Q9JIL4 519 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 PtgesQ9JM51 153 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm11214V9GX06 183 aa13.73□□□□□ -0.21
Nup88-202ENSMUST00000108530 Igkv6-25A0A140T8N7 115 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fam46aD3Z5S8 447 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn2r34E9PVI0 852 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn2r91E9Q2U5 856 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn2r37F8VQD3 802 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Olfr618K7N6B3 318 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Papss2O88428 621 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Klk1b16P04071 261 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Eef1a1P10126 462 aaKnown RBP13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Foxk1P42128 719 aaKnown RBP13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Map3k8Q07174 467 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Hephl1Q3V1H3 1159 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Clec4a4Q5YIR8 236 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Hspa13Q8BM72 471 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 CtsoQ8BM88 312 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Rhbdd3Q8BP97 385 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 UstQ8BUB6 407 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Kcnk10Q8BUW1 535 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc25a21Q8BZ09 298 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Slc24a5Q8C261 501 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Prkd3Q8K1Y2 889 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Blzf1Q8R2X8 403 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Far1Q922J9 515 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pno1Q9CPS7 248 aaKnown RBP13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Q9D1K7 174 aaKnown RBP13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 NtsQ9D3P9 169 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 PudpQ9D5U5 234 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Tvp23bQ9D8T4 205 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Dll4Q9JI71 686 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cyp2d22Q9JKY7 500 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 ChmlQ9QZD5 621 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Esp22A8R0V4 111 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Usp36B1AQJ2 1098 aaKnown RBP13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm10639E9Q6L7 222 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm20696H3BJN7 74 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Vmn1r27K7N688 303 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Gm20878L7N244 103 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Epha8O09127 1004 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cops4O88544 406 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ctla4P09793 223 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Msx1P13297 303 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Acp2P24638 423 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 CpoxP36552 443 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Epha4Q03137 986 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Commd6Q3V4B5 87 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Cd34Q64314 382 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fam124bQ8BLQ0 456 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Znf574Q8BY46 900 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Nrn1lQ8C4W3 162 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 C1sbQ8CFG8 688 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Csnka2ipQ8CH19 720 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Pcdhga4Q91XY4 930 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Ndufb2Q9CPU2 105 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Lamtor5Q9D1L9 91 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Kti12Q9D1R2 351 aa13.72□□□□□ -0.21
Nup88-202ENSMUST00000108530 Fam45aQ9D8N2 357 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 98.3 ms