RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 ROBO4Q8WZ75 1007 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 CDS1Q92903 461 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 CHMP6Q96FZ7 201 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 PLPPR2Q96GM1 343 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 KLHL15Q96M94 604 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 TRMOQ9BU70 441 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 ACTR6Q9GZN1 396 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 HHATLQ9HCP6 504 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 GLRX2Q9NS18 164 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 ZCCHC3Q9NUD5 404 aaKnown RBP14.54□□□□□ -0.08
MBD3-206ENST00000589901 GIN1Q9NXP7 522 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 GIMAP2Q9UG22 337 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 TMED5Q9Y3A6 229 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 ROS1P08922 2347 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 TLN2Q9Y4G6 2542 aa14.54□□□□□ -0.08
MBD3-206ENST00000589901 A0A1W2PQD3 144 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 PIP5K1BO14986 540 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 OIP5O43482 229 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 EFNA2O43921 213 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 TRIM13O60858 407 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 NTN1O95631 604 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 PCSK6P29122 969 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 LCN1P31025 176 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 SFTPDP35247 375 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 ASMTP46597 345 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 CARD18P57730 90 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 ZNF117Q03924 483 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 FOXF1Q12946 379 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 LASP1Q14847 261 aaKnown RBP14.53□□□□□ -0.08
MBD3-206ENST00000589901 ALKBH2Q6NS38 261 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 CBLN3Q6UW01 205 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 BEND4Q6ZU67 534 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 TRABD2AQ86V40 505 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 ABHD3Q8WU67 409 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 TWIST2Q8WVJ9 160 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 MTERF3Q96E29 417 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 BTBD2Q9BX70 525 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 ATP6V1HQ9UI12 483 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 SNX8Q9Y5X2 465 aa14.53□□□□□ -0.08
MBD3-206ENST00000589901 NPIPA5A0A0B4J1W7 369 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 NPIPA7E9PJI5 369 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 SCAMP2O15127 329 aaKnown RBP14.52□□□□□ -0.09
MBD3-206ENST00000589901 CNOT4O95628 575 aaKnown RBP14.52□□□□□ -0.09
MBD3-206ENST00000589901 FGF4P08620 206 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 NPIPA8P0DM63 369 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 LAMP1P11279 417 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 NID1P14543 1247 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 ALDH3A1P30838 453 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 NR1H2P55055 460 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 ZNF844Q08AG5 666 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 MLC1Q15049 377 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 ZNF239Q16600 458 aaKnown RBP14.52□□□□□ -0.09
MBD3-206ENST00000589901 ARL13AQ5H913 290 aaPredicted RBP14.52□□□□□ -0.09
MBD3-206ENST00000589901 PDSS1Q5T2R2 415 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 LRIG3Q6UXM1 1119 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 R3HCC1LQ7Z5L2 792 aaKnown RBP14.52□□□□□ -0.09
MBD3-206ENST00000589901 STK32CQ86UX6 486 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 PRIMA1Q86XR5 153 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 PHOSPHO1Q8TCT1 267 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 AGR3Q8TD06 166 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 TMEM171Q8WVE6 324 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 APOPT1Q96IL0 206 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 STACQ99469 402 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 TMEM204Q9BSN7 226 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 MECRQ9BV79 373 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 SRXN1Q9BYN0 137 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 PIGUQ9H490 435 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 EML4Q9HC35 981 aaKnown RBP14.52□□□□□ -0.09
MBD3-206ENST00000589901 FANCFQ9NPI8 374 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 DUSP22Q9NRW4 184 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.52□□□□□ -0.09
MBD3-206ENST00000589901 GPR52Q9Y2T5 361 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 TRAF6Q9Y4K3 522 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 KCNE3Q9Y6H6 103 aa14.52□□□□□ -0.09
MBD3-206ENST00000589901 V9GYY5 206 aaPredicted RBP14.52□□□□□ -0.09
MBD3-206ENST00000589901 RAI1Q7Z5J4 1906 aaPredicted RBP14.51□□□□□ -0.09
MBD3-206ENST00000589901 CSPG4Q6UVK1 2322 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 HS3ST1O14792 307 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 PEX11AO75192 247 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 NUDT14O95848 222 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 PSMB1P20618 241 aaKnown RBP14.51□□□□□ -0.09
MBD3-206ENST00000589901 HPCAL1P37235 193 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 EIF1P41567 113 aaKnown RBP14.51□□□□□ -0.09
MBD3-206ENST00000589901 PTGR1Q14914 329 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 TSC22D1Q15714 1073 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 TOMM34Q15785 309 aaPredicted RBP14.51□□□□□ -0.09
MBD3-206ENST00000589901 NDUFAF6Q330K2 333 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 KLHL26Q53HC5 615 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.51□□□□□ -0.09
MBD3-206ENST00000589901 GTF2IRD2BQ6EKJ0 949 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 NUFIP2Q7Z417 695 aaKnown RBP14.51□□□□□ -0.09
MBD3-206ENST00000589901 CROCCP2Q86T23 111 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 GTF2IRD2Q86UP8 949 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 TUSC5Q8IXB3 177 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 OR2W6PQ8NHA6 318 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 FBXO27Q8NI29 283 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 RNF128Q8TEB7 428 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 AENQ8WTP8 325 aaKnown RBP14.51□□□□□ -0.09
MBD3-206ENST00000589901 S100PBPQ96BU1 408 aa14.51□□□□□ -0.09
MBD3-206ENST00000589901 ZNF524Q96C55 264 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms