RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 NR0B1P51843 470 aaKnown RBP12.7□□□□□ -0.38
TPM1-215ENST00000558868 PNLIPRP2P54317 469 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 HOXC5Q00444 222 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 SPEM2Q0P670 501 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 PLCXD2Q0VAA5 305 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 TSPAN31Q12999 210 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 EIF3IQ13347 325 aaKnown RBP12.7□□□□□ -0.38
TPM1-215ENST00000558868 MAD2L1BPQ15013 274 aaPredicted RBP12.7□□□□□ -0.38
TPM1-215ENST00000558868 CDCP2Q5VXM1 449 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 PAPD4Q6PIY7 484 aaKnown RBP12.7□□□□□ -0.38
TPM1-215ENST00000558868 ISLR2Q6UXK2 745 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 ZER1Q7Z7L7 766 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 LSMEM1Q8N8F7 131 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 ZNF441Q8N8Z8 693 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 NFAM1Q8NET5 270 aaPredicted RBP12.7□□□□□ -0.38
TPM1-215ENST00000558868 OR8K3Q8NH51 312 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 NUBPLQ8TB37 319 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 FAM81AQ8TBF8 368 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 EFHD2Q96C19 240 aaPredicted RBP12.7□□□□□ -0.38
TPM1-215ENST00000558868 MPP4Q96JB8 637 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 DEPDC7Q96QD5 511 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 TAAR9Q96RI9 348 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 DDA1Q9BW61 102 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 PRR14Q9BWN1 585 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 IRF2BPLQ9H1B7 796 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 EXOSC3Q9NQT5 275 aaKnown RBP12.7□□□□□ -0.38
TPM1-215ENST00000558868 NCDNQ9UBB6 729 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 RPS6KB2Q9UBS0 482 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 REV1Q9UBZ9 1251 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 SLC7A7Q9UM01 511 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 TMEM5Q9Y2B1 443 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 PCDHGA6Q9Y5G7 932 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 UNC79Q9P2D8 2635 aa12.7□□□□□ -0.38
TPM1-215ENST00000558868 FER1L5A0AVI2 2057 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 C4orf47A7E2U8 309 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 H3BN98 237 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 GTPBP1O00178 669 aaKnown RBP12.69□□□□□ -0.38
TPM1-215ENST00000558868 MRPS14O60783 128 aaKnown RBP12.69□□□□□ -0.38
TPM1-215ENST00000558868 PRG2P13727 222 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 ZNF28P17035 718 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 FUT4P22083 530 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 MMP11P24347 488 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 CHMP24386 653 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 CRHBPP24387 322 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 FPR3P25089 353 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 POU1F1P28069 291 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 HTR2AP28223 471 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 EPHA2P29317 976 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 RBM34P42696 430 aaKnown RBP12.69□□□□□ -0.38
TPM1-215ENST00000558868 GSSP48637 474 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 COPZ1P61923 177 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 RNF4P78317 190 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 INSM1Q01101 510 aaPredicted RBP12.69□□□□□ -0.38
TPM1-215ENST00000558868 EFR3AQ14156 821 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 PTGES3Q15185 160 aaKnown RBP12.69□□□□□ -0.38
TPM1-215ENST00000558868 ST3GAL2Q16842 350 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 ISXQ2M1V0 245 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 CTU2Q2VPK5 515 aaKnown RBP12.69□□□□□ -0.38
TPM1-215ENST00000558868 CCDC157Q569K6 752 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 BROXQ5VW32 411 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 ZNF773Q6PK81 442 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 RAB11FIP2Q7L804 512 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 P3H2Q8IVL5 708 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 CDK20Q8IZL9 346 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 OR4C3Q8NH37 302 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 WDR36Q8NI36 951 aaKnown RBP12.69□□□□□ -0.38
TPM1-215ENST00000558868 CCNL2Q96S94 520 aaPredicted RBP12.69□□□□□ -0.38
TPM1-215ENST00000558868 TEX12Q9BXU0 123 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 CCNB1IP1Q9NPC3 277 aa12.69□□□□□ -0.38
TPM1-215ENST00000558868 ASCC3Q8N3C0 2202 aaKnown RBP12.69□□□□□ -0.38
TPM1-215ENST00000558868 CCDC187A0A096LP49 1063 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 A0A1W2PQD3 144 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 SLC1A7O00341 560 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 CHP2O43745 196 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 TSPAN2O60636 221 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 CNOT3O75175 753 aaKnown RBP12.68□□□□□ -0.38
TPM1-215ENST00000558868 ZFAND5O76080 213 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 MT-CO3P00414 261 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 TFAP2AP05549 437 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 JMJD7P0C870 316 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 UBL4AP11441 157 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 NAGAP17050 411 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 ACAA2P42765 397 aaKnown RBP12.68□□□□□ -0.38
TPM1-215ENST00000558868 SLC6A8P48029 635 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 IDH2P48735 452 aaKnown RBP12.68□□□□□ -0.38
TPM1-215ENST00000558868 NCF4Q15080 339 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 SLX4IPQ5VYV7 408 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 LCN10Q6JVE6 187 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 ULK3Q6PHR2 472 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 FAM198BQ6UWH4 519 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 CASP12Q6UXS9 341 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 ZNF517Q6ZMY9 492 aaPredicted RBP12.68□□□□□ -0.38
TPM1-215ENST00000558868 RASSF6Q6ZTQ3 369 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 PRICKLE2Q7Z3G6 844 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 NKAIN4Q8IVV8 208 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 ENTHD1Q8IYW4 607 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 BPIFB6Q8NFQ5 453 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 RHOXF1Q8NHV9 184 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 DNAJA4Q8WW22 397 aaPredicted RBP12.68□□□□□ -0.38
TPM1-215ENST00000558868 TMEM239Q8WW34 195 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms