RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TNFSF13O75888 250 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 OPN1LWP04000 364 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 PGRP06401 933 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 LINGO3P0C6S8 592 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 OR12D1P0DN82 309 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF17P17021 662 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 GPR68Q15743 365 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 NDUFAF6Q330K2 333 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 ARHGAP11BQ3KRB8 267 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 SAXO2Q658L1 398 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 TNFAIP8L2Q6P589 184 aaPredicted RBP11.61□□□□□ -0.55
HDAC1-209ENST00000484305 P4HA3Q7Z4N8 544 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 LURAP1LQ8IV03 231 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 ZZZ3Q8IYH5 903 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 METTL25Q8N6Q8 603 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF614Q8N883 585 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 RAB8BQ92930 207 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 ZBTB8AQ96BR9 441 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 NEURL3Q96EH8 262 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 LRRC46Q96FV0 321 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 RNF145Q96MT1 663 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 OR52B2Q96RD2 323 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 OR52E6Q96RD3 313 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 SLC35A5Q9BS91 424 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 INPP5KQ9BT40 448 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 ACBD3Q9H3P7 528 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 SLC24A3Q9HC58 644 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 CRIM1Q9NZV1 1036 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 BTNL2Q9UIR0 455 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 FOXD3Q9UJU5 478 aaPredicted RBP11.61□□□□□ -0.55
HDAC1-209ENST00000484305 MKLN1Q9UL63 735 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 ICAM5Q9UMF0 924 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 CARD8Q9Y2G2 431 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 DTNAQ9Y4J8 743 aa11.61□□□□□ -0.55
HDAC1-209ENST00000484305 CENPVL1A0A0U1RR11 272 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 A0A1W2PNV4 684 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 C7orf72A4D263 438 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 CCDC154A6NI56 674 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 GTPBP1O00178 669 aaKnown RBP11.6□□□□□ -0.55
HDAC1-209ENST00000484305 EIF1AYO14602 144 aaKnown RBP11.6□□□□□ -0.55
HDAC1-209ENST00000484305 STX11O75558 287 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 IDO1P14902 403 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 CHI3L1P36222 383 aaPredicted RBP11.6□□□□□ -0.55
HDAC1-209ENST00000484305 CDKN2CP42773 168 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 KIR2DL3P43628 341 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 P2RX1P51575 399 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 PON3Q15166 354 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 TOMM34Q15785 309 aaPredicted RBP11.6□□□□□ -0.55
HDAC1-209ENST00000484305 CTU2Q2VPK5 515 aaKnown RBP11.6□□□□□ -0.55
HDAC1-209ENST00000484305 PDZK1Q5T2W1 519 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 HEPHL1Q6MZM0 1159 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 C16orf62Q7Z3J2 963 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 LUZP2Q86TE4 346 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 FNDC9Q8TBE3 224 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 XAGE5Q8WWM1 108 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF524Q96C55 264 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 PANX1Q96RD7 426 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 NMUR2Q9GZQ4 415 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 TMEM185BQ9H7F4 350 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 EXD2Q9NVH0 621 aa11.6□□□□□ -0.55
HDAC1-209ENST00000484305 ANKRD17O75179 2603 aaKnown RBP11.59□□□□□ -0.55
HDAC1-209ENST00000484305 SPG11Q96JI7 2443 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 PRAMEF27A3QJZ7 478 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 H3BNH8 94 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 HMGN4O00479 90 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 EFNA2O43921 213 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 DIAPH2O60879 1101 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 SLC22A3O75751 556 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 UGT2B17O75795 530 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 AQP8O94778 261 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 NUDT14O95848 222 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 AK1P00568 194 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 GSNP06396 782 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 CRHP06850 196 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 H2AFXP16104 143 aaPredicted RBP11.59□□□□□ -0.55
HDAC1-209ENST00000484305 CAPN3P20807 821 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 IL11P20809 199 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 PEX19P40855 299 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 EIF1AXP47813 144 aaKnown RBP11.59□□□□□ -0.55
HDAC1-209ENST00000484305 RPS3AP61247 264 aaKnown RBP11.59□□□□□ -0.55
HDAC1-209ENST00000484305 RAC1P63000 192 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 FUT5Q11128 374 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 FOXF1Q12946 379 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF141Q15928 474 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 SGCBQ16585 318 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 PDCD4Q53EL6 469 aaKnown RBP11.59□□□□□ -0.55
HDAC1-209ENST00000484305 OR2A2Q6IF42 318 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 VWA1Q6PCB0 445 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 EPGNQ6UW88 154 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 HDXQ7Z353 690 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 TMEM200AQ86VY9 491 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 RNF130Q86XS8 419 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 CNEP1R1Q8N9A8 125 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 GLB1L3Q8NCI6 653 aaPredicted RBP11.59□□□□□ -0.55
HDAC1-209ENST00000484305 OR10D3Q8NH80 312 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 RFWD2Q8NHY2 731 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 FBXO27Q8NI29 283 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 GPR119Q8TDV5 335 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 STARD4Q96DR4 205 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 ADGRG7Q96K78 797 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms