RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 UROSP10746 265 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 HPGDP15428 266 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 LCN1P31025 176 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 PRIM2P49643 509 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 MANFP55145 182 aaKnown RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 DNAJB13P59910 316 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 VEZF1Q14119 521 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 TSC22D1Q15714 1073 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 CD226Q15762 336 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 ZNF239Q16600 458 aaKnown RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 EXOSC6Q5RKV6 272 aaKnown RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 NCMAPQ5T1S8 102 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 CCNJQ5T5M9 372 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 CLEC6AQ6EIG7 209 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 TFAP2EQ6VUC0 442 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 NUFIP2Q7Z417 695 aaKnown RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 MISPQ8IVT2 679 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 LILRA2Q8N149 483 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 MAPK1IP1LQ8NDC0 245 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 B4GALNT2Q8NHY0 566 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 EPS8L3Q8TE67 593 aaKnown RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 ABHD3Q8WU67 409 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 PPCDCQ96CD2 204 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 ZBED6CLQ96FA7 236 aaPredicted RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 OTUB1Q96FW1 271 aaPredicted RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 C16orf58Q96GQ5 468 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 CCT7Q99832 543 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 TACO1Q9BSH4 297 aaKnown RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 HDHD5Q9BXW7 423 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 REEP4Q9H6H4 257 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 SH3BP4Q9P0V3 963 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 CUBNO60494 3623 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 SMIM23A6NLE4 172 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 SLC28A1O00337 649 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 SCDO00767 359 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 AKAP10O43572 662 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 EFNA2O43921 213 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 GLRA3O75311 464 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 SOD3P08294 240 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 ALOX5P09917 674 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 PABPC4LP0CB38 370 aaKnown RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 SDC1P18827 310 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 SFTPDP35247 375 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 FOXF1Q12946 379 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 PDE7AQ13946 482 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 ETFDHQ16134 617 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 CFAP157Q5JU67 520 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 TMEM201Q5SNT2 666 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 SFRP5Q5T4F7 317 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 HEPHL1Q6MZM0 1159 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 ZCCHC12Q6PEW1 402 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 Q6ZSR9 355 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 TUSC5Q8IXB3 177 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 FBXW5Q969U6 566 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 CPNE4Q96A23 557 aaPredicted RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 TRMT61AQ96FX7 289 aaKnown RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 FCRL1Q96LA6 429 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 TSSK3Q96PN8 268 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 SRXN1Q9BYN0 137 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 LRTM1Q9HBL6 345 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 ACSS1Q9NUB1 689 aaPredicted RBP13.39□□□□□ -0.27
GDPD3-201ENST00000360688 KLHL13Q9P2N7 655 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 BAIAP2L1Q9UHR4 511 aa13.39□□□□□ -0.27
GDPD3-201ENST00000360688 ALPK2Q86TB3 2170 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 CLOCKO15516 846 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 PLIN3O60664 434 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 CD3EP07766 207 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 NUDT17P0C025 328 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 ELK4P28324 431 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 IDUAP35475 653 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 EIF1P41567 113 aaKnown RBP13.38□□□□□ -0.27
GDPD3-201ENST00000360688 SERPINB4P48594 390 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 ZNF117Q03924 483 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 DMTNQ08495 405 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 IFFO1Q0D2I5 559 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 RNPS1Q15287 305 aaKnown RBP13.38□□□□□ -0.27
GDPD3-201ENST00000360688 TAB1Q15750 504 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 ZNF619Q8N2I2 560 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 RIBC1Q8N443 379 aaPredicted RBP13.38□□□□□ -0.27
GDPD3-201ENST00000360688 COX18Q8N8Q8 333 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 OR2T11Q8NH01 316 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 OR2W6PQ8NHA6 318 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 CLHC1Q8NHS4 586 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 SMAP2Q8WU79 429 aaPredicted RBP13.38□□□□□ -0.27
GDPD3-201ENST00000360688 NEUROG1Q92886 237 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 REXO5Q96IC2 774 aaKnown RBP13.38□□□□□ -0.27
GDPD3-201ENST00000360688 REPIN1Q9BWE0 567 aaKnown RBP13.38□□□□□ -0.27
GDPD3-201ENST00000360688 PARD6BQ9BYG5 372 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 REG4Q9BYZ8 158 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 ESRP2Q9H6T0 727 aaKnown RBP13.38□□□□□ -0.27
GDPD3-201ENST00000360688 NGBQ9NPG2 151 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 TIGARQ9NQ88 270 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 OXSMQ9NWU1 459 aa13.38□□□□□ -0.27
GDPD3-201ENST00000360688 PLCE1Q9P212 2302 aa13.37□□□□□ -0.27
GDPD3-201ENST00000360688 ZNF195O14628 629 aa13.37□□□□□ -0.27
GDPD3-201ENST00000360688 OIP5O43482 229 aa13.37□□□□□ -0.27
GDPD3-201ENST00000360688 RGS14O43566 566 aa13.37□□□□□ -0.27
GDPD3-201ENST00000360688 HSPA4LO95757 839 aa13.37□□□□□ -0.27
GDPD3-201ENST00000360688 EFNA1P20827 205 aaPredicted RBP13.37□□□□□ -0.27
GDPD3-201ENST00000360688 IL32P24001 234 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms