RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TTC36A6NLP5 189 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 HAX1O00165 279 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 SS18L1O75177 396 aaPredicted RBP15.47■□□□□ 0.07
RETREG3-210ENST00000590541 SLU7O95391 586 aaKnown RBP15.47■□□□□ 0.07
RETREG3-210ENST00000590541 EVI2BP34910 448 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 SERPINB5P36952 375 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 NCBP2P52298 156 aaKnown RBP eCLIP15.47■□□□□ 0.072e-8■■■■□ 22.1
RETREG3-210ENST00000590541 GANABQ14697 944 aaKnown RBP15.47■□□□□ 0.07
RETREG3-210ENST00000590541 KIAA0040Q15053 153 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 SGCBQ16585 318 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.47■□□□□ 0.07
RETREG3-210ENST00000590541 PGGHGQ32M88 737 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 NCMAPQ5T1S8 102 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 BEND4Q6ZU67 534 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 GGNQ86UU5 652 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 CDC26Q8NHZ8 85 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 AENQ8WTP8 325 aaKnown RBP15.47■□□□□ 0.07
RETREG3-210ENST00000590541 CCT7Q99832 543 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 TMEM109Q9BVC6 243 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 C19orf24Q9BVV8 132 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 C12orf65Q9H3J6 166 aaKnown RBP15.47■□□□□ 0.07
RETREG3-210ENST00000590541 LRTM1Q9HBL6 345 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 C19orf53Q9UNZ5 99 aaPredicted RBP15.47■□□□□ 0.07
RETREG3-210ENST00000590541 POLR3HQ9Y535 204 aaPredicted RBP15.47■□□□□ 0.07
RETREG3-210ENST00000590541 AP4B1Q9Y6B7 739 aa15.47■□□□□ 0.07
RETREG3-210ENST00000590541 UQCRHLA0A096LP55 91 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 CLOCKO15516 846 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 ZNF500O60304 480 aaPredicted RBP15.46■□□□□ 0.07
RETREG3-210ENST00000590541 FADS1O60427 444 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 DDX5P17844 614 aaKnown RBP15.46■□□□□ 0.07
RETREG3-210ENST00000590541 PSMB1P20618 241 aaKnown RBP15.46■□□□□ 0.07
RETREG3-210ENST00000590541 FAPQ12884 760 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 CYP27C1Q4G0S4 372 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 CLEC6AQ6EIG7 209 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 ALKBH2Q6NS38 261 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 OR7G2Q8NG99 324 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 OR2W6PQ8NHA6 318 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 C1GALT1C1Q96EU7 318 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 FOLH1BQ9HBA9 442 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 TNFRSF12AQ9NP84 129 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 FLRT3Q9NZU0 649 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 MRTO4Q9UKD2 239 aaKnown RBP15.46■□□□□ 0.07
RETREG3-210ENST00000590541 OR10H1Q9Y4A9 318 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 PCNX3Q9H6A9 2034 aa15.46■□□□□ 0.07
RETREG3-210ENST00000590541 IGHV4-30-2A0A087WSY4 118 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 A0A1W2PP18 115 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 TBX19O60806 448 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 PLGP00747 810 aaPredicted RBP15.45■□□□□ 0.06
RETREG3-210ENST00000590541 JUNP05412 331 aaKnown RBP15.45■□□□□ 0.06
RETREG3-210ENST00000590541 ALDH3A1P30838 453 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 CTBP2P56545 445 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 STX5Q13190 355 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 ZNHIT3Q15649 155 aaPredicted RBP15.45■□□□□ 0.06
RETREG3-210ENST00000590541 ZNF672Q499Z4 452 aaPredicted RBP15.45■□□□□ 0.06
RETREG3-210ENST00000590541 KANK2Q63ZY3 851 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 PPP4R4Q6NUP7 873 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 DNAJC14Q6Y2X3 702 aaPredicted RBP15.45■□□□□ 0.06
RETREG3-210ENST00000590541 Q6ZSR9 355 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 ATG4DQ86TL0 474 aaPredicted RBP15.45■□□□□ 0.06
RETREG3-210ENST00000590541 SLC44A2Q8IWA5 706 aaPredicted RBP15.45■□□□□ 0.06
RETREG3-210ENST00000590541 OR2L13Q8N349 312 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 MREGQ8N565 214 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 S100PBPQ96BU1 408 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 FCRL1Q96LA6 429 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 AMDHD1Q96NU7 426 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 TACO1Q9BSH4 297 aaKnown RBP15.45■□□□□ 0.06
RETREG3-210ENST00000590541 PRRG4Q9BZD6 226 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 GLIPR2Q9H4G4 154 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 PTGES2Q9H7Z7 377 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 FANCFQ9NPI8 374 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 DDX18Q9NVP1 670 aaKnown RBP15.45■□□□□ 0.06
RETREG3-210ENST00000590541 TMEM160Q9NX00 188 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 DNAJC15Q9Y5T4 150 aa15.45■□□□□ 0.06
RETREG3-210ENST00000590541 SHISA8B8ZZ34 492 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 CD8AP01732 235 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 CD3EP07766 207 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 ASMTP46597 345 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 EIF1AXP47813 144 aaKnown RBP15.44■□□□□ 0.06
RETREG3-210ENST00000590541 PSMD4P55036 377 aaKnown RBP15.44■□□□□ 0.06
RETREG3-210ENST00000590541 PSG6Q00889 435 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 TMEM44Q2T9K0 475 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 TMEM249Q2WGJ8 235 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 GLYR1Q49A26 553 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-210ENST00000590541 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.44■□□□□ 0.06
RETREG3-210ENST00000590541 KBTBD8Q8NFY9 601 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 ZFP28Q8NHY6 868 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 TCP10LQ8TDR4 215 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 MTERF3Q96E29 417 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 ELP4Q96EB1 424 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 HS6ST2Q96MM7 605 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 TRAF4Q9BUZ4 470 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-210ENST00000590541 BEX2Q9BXY8 128 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 AMBRA1Q9C0C7 1298 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 C3orf14Q9HBI5 128 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 BARX1Q9HBU1 254 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-210ENST00000590541 SDHAF3Q9NRP4 125 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 TRAF6Q9Y4K3 522 aa15.44■□□□□ 0.06
RETREG3-210ENST00000590541 TMEM114B3SHH9 223 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 UPK1AO00322 258 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 EIF1AYO14602 144 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms