RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 TEX10Q9NXF1 929 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-205ENST00000539661 NLGN3Q9NZ94 848 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 RPS6KB2Q9UBS0 482 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 DAPL1A0PJW8 107 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 CPSF4LA6NMK7 179 aaKnown RBP16.42■□□□□ 0.22
RAB40C-205ENST00000539661 CKMP06732 381 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 RAB3BP20337 219 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 PIP5KL1Q5T9C9 394 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 LHX8Q68G74 356 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 NIPAL3Q6P499 406 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 ARL9Q6T311 187 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 MBOAT2Q6ZWT7 520 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 SLC44A3Q8N4M1 653 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 ANKRD53Q8N9V6 530 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 SLC43A3Q8NBI5 491 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 ZBTB44Q8NCP5 570 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 ST8SIA4Q92187 359 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 NDC1Q9BTX1 674 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 DPEP2Q9H4A9 486 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 SPG21Q9NZD8 308 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 PPIEQ9UNP9 301 aaKnown RBP16.42■□□□□ 0.22
RAB40C-205ENST00000539661 CHST2Q9Y4C5 530 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 COL4A6Q14031 1691 aa16.42■□□□□ 0.22
RAB40C-205ENST00000539661 SLC2A10O95528 541 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 ACADLP28330 430 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 SELENOPP49908 381 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 METTL11BQ5VVY1 283 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 FAM198BQ6UWH4 519 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 TRMT11Q7Z4G4 463 aaKnown RBP16.41■□□□□ 0.22
RAB40C-205ENST00000539661 RNF180Q86T96 592 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 MOAP1Q96BY2 351 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 LINC00052Q96N35 136 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 DPYSL5Q9BPU6 564 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 PITHD1Q9GZP4 211 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-205ENST00000539661 KRCC1Q9NPI7 259 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-205ENST00000539661 WASH6PQ9NQA3 447 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 STARD7Q9NQZ5 370 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 MRPL17Q9NRX2 175 aaKnown RBP16.41■□□□□ 0.22
RAB40C-205ENST00000539661 TRAV1-2A0A0B4J238 106 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 C17orf113A0A1B0GUU1 675 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 LEFTY1O75610 366 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 HPXP02790 462 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 MT-ND4P03905 459 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 INHAP05111 366 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 NTSP30990 170 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 TAS2R38P59533 333 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 SLC25A35Q3KQZ1 300 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 TCTE1Q5JU00 501 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 FAM27D1Q5T7N8 215 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 HMGN2P46Q86SG4 172 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 CRIPAKQ8N1N5 446 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 SPICQ8N5J4 248 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 SMIM4Q8WVI0 70 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 RAD51AP1Q96B01 352 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 ART5Q96L15 291 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 CMTM3Q96MX0 182 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 SLC35C2Q9NQQ7 365 aa16.41■□□□□ 0.22
RAB40C-205ENST00000539661 SCN5AQ14524 2016 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 GSAPA4D1B5 854 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 OR6C65A6NJZ3 312 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 NDUFS4O43181 175 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 STX11O75558 287 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 ANKRD34CP0C6C1 535 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 KELP23276 732 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 BTN1A1Q13410 526 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 MAPK14Q16539 360 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 TFAP2EQ6VUC0 442 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 TMEM99Q8N816 258 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 ZNF527Q8NB42 609 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 OR51Q1Q8NH59 317 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 CXorf40AQ8TE69 158 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 SORCS1Q8WY21 1168 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 LINC00615Q96LM1 132 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-205ENST00000539661 SFXN2Q96NB2 322 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 ZFP3Q96NJ6 502 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 MFRPQ9BY79 579 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 ZCCHC4Q9H5U6 513 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 NPDC1Q9NQX5 325 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-205ENST00000539661 NANSQ9NR45 359 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 KLHL28Q9NXS3 571 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 CALML5Q9NZT1 146 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 AKAP7Q9P0M2 348 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-205ENST00000539661 THSD7BQ9C0I4 1608 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 KIAA0100Q14667 2235 aaKnown RBP16.4■□□□□ 0.22
RAB40C-205ENST00000539661 A0A1B0GUH1 482 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 NAP1L6A6NFF2 107 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 ANKRD61A6NGH8 418 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 MTRF1O75570 445 aaKnown RBP16.4■□□□□ 0.22
RAB40C-205ENST00000539661 WDPCPO95876 746 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 WNT1P04628 370 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 ELFN1P0C7U0 828 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 GPR4P46093 362 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 GCGRP47871 477 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 NCBP2P52298 156 aaKnown RBP eCLIP16.4■□□□□ 0.22
RAB40C-205ENST00000539661 RGS7BPQ6MZT1 257 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-205ENST00000539661 LIPIQ6XZB0 460 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 TRAPPC5Q8IUR0 188 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 NRMQ8IXM6 262 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 OR56A1Q8NGH5 318 aa16.4■□□□□ 0.22
RAB40C-205ENST00000539661 OR6M1Q8NGM8 313 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms