RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 ZNF350Q9GZX5 532 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 RAD21L1Q9H4I0 556 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 MRGBPQ9NV56 204 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 WDR45Q9Y484 360 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 DTNAQ9Y4J8 743 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 KLF2Q9Y5W3 355 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-202ENST00000340477 TMEM247A6NEH6 219 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 CLDN1O95832 211 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 NUDT14O95848 222 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 PEPDP12955 493 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 CHRNB4P30926 498 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 GFRA1P56159 465 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 GUCY1A3Q02108 690 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 ACSF3Q4G176 576 aaPredicted RBP17.4■□□□□ 0.38
SYNE4-202ENST00000340477 AGKQ53H12 422 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 HEPHL1Q6MZM0 1159 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 BLOC1S3Q6QNY0 202 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 CHMP1BQ7LBR1 199 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 LACC1Q8IV20 430 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 MARVELD2Q8N4S9 558 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 TMCO5AQ8N6Q1 288 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 ROPN1LQ96C74 230 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 WDYHV1Q96HA8 205 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 FGFR1OP2Q9NVK5 253 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 VDAC3Q9Y277 283 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 FAM215AQ9Y5M1 114 aa17.4■□□□□ 0.38
SYNE4-202ENST00000340477 HMGN4O00479 90 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 ZIC3O60481 467 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 GUSBP08236 651 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 GLI4P10075 376 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 UBL4AP11441 157 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 CPN1P15169 458 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 ZNF17P17021 662 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 ZFP36L2P47974 494 aaKnown RBP17.39■□□□□ 0.37
SYNE4-202ENST00000340477 SUMO3P55854 103 aaPredicted RBP17.39■□□□□ 0.37
SYNE4-202ENST00000340477 EEFSECP57772 596 aaKnown RBP17.39■□□□□ 0.37
SYNE4-202ENST00000340477 SRYQ05066 204 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 KLHL26Q53HC5 615 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 DCST1Q5T197 706 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 PDZK1Q5T2W1 519 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 METTL21CQ5VZV1 264 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 RPRMLQ8N4K4 120 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 MEIOBQ8N635 442 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 ZFP90Q8TF47 636 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 ZBTB8AQ96BR9 441 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 TRIB1Q96RU8 372 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 TMEM120AQ9BXJ8 343 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 CCDC134Q9H6E4 229 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 TPT1P8Q9HAU6 139 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 CACYBPQ9HB71 228 aaKnown RBP17.39■□□□□ 0.37
SYNE4-202ENST00000340477 THUMPD1Q9NXG2 353 aaKnown RBP17.39■□□□□ 0.37
SYNE4-202ENST00000340477 P2RX2Q9UBL9 471 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 MKLN1Q9UL63 735 aa17.39■□□□□ 0.37
SYNE4-202ENST00000340477 A0A096LPI6 279 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 KIAA0513O60268 411 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 TNFRSF21O75509 655 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 EPPINO95925 133 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 NR2F1P10589 423 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 MDH1P40925 334 aaKnown RBP17.38■□□□□ 0.37
SYNE4-202ENST00000340477 CRATP43155 626 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 CCR4P51679 360 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 ARFIP2P53365 341 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 ZNF117Q03924 483 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 GNA13Q14344 377 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 CD226Q15762 336 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 BCL2A1Q16548 175 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 RIPPLY2Q5TAB7 128 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 RTL6Q6ICC9 239 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 SLC2A7Q6PXP3 512 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 ZNF619Q8N2I2 560 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 TOR1AIP2Q8NFQ8 470 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 ZPLD1Q8TCW7 415 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 GTF2H4Q92759 462 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 TRNT1Q96Q11 434 aaKnown RBP17.38■□□□□ 0.37
SYNE4-202ENST00000340477 CHST11Q9NPF2 352 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 CALML5Q9NZT1 146 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 RNF6Q9Y252 685 aa17.38■□□□□ 0.37
SYNE4-202ENST00000340477 UTP20O75691 2785 aaKnown RBP17.38■□□□□ 0.37
SYNE4-202ENST00000340477 OR2M5A3KFT3 312 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 SERINC4A6NH21 518 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 HSPB2A8KAH6 182 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 B4DXG7 233 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 NPIPB9F8W1W9 429 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 H3BML4 177 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 ANGPT2O15123 496 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 ZNF264O43296 627 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 EIF4E2O60573 245 aaKnown RBP17.37■□□□□ 0.37
SYNE4-202ENST00000340477 H6PDO95479 791 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 IL2RAP01589 272 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 PPIBP23284 216 aaKnown RBP17.37■□□□□ 0.37
SYNE4-202ENST00000340477 ME2P23368 584 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 HTR1EP28566 365 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 LHX2P50458 406 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 P2RX1P51575 399 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 DSTNP60981 165 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 ZNF141Q15928 474 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 HSPB2Q16082 182 aa17.37■□□□□ 0.37
SYNE4-202ENST00000340477 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.37■□□□□ 0.37
SYNE4-202ENST00000340477 EIF3MQ7L2H7 374 aaKnown RBP17.37■□□□□ 0.37
SYNE4-202ENST00000340477 CALHM2Q9HA72 323 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 306.9 ms