RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 ENTPD4Q9Y227 616 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 PIN4Q9Y237 131 aaKnown RBP17.47■□□□□ 0.39
PTPA-223ENST00000452489 PCDHGA5Q9Y5G8 931 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 CHST10O43529 356 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 TBXA2RP21731 343 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 NFYBP25208 207 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 OR1E1P30953 314 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 RPIAP49247 311 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 P2RY4P51582 365 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 CDK5Q00535 292 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 RAB33AQ14088 237 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 ZNF626Q68DY1 528 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 FCRLBQ6BAA4 426 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 MOB3CQ70IA8 216 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 SLC44A3Q8N4M1 653 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 ZBTB2Q8N680 514 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 THEM6Q8WUY1 208 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 SMG9Q9H0W8 520 aaKnown RBP17.47■□□□□ 0.39
PTPA-223ENST00000452489 MARK1Q9P0L2 795 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 VPS29Q9UBQ0 182 aa17.47■□□□□ 0.39
PTPA-223ENST00000452489 A0A0D9SEW6 157 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 IRGMA1A4Y4 181 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 GPR37O15354 613 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 PSMA3P25788 255 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 CSF2RBP32927 897 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 ACTR1AP61163 376 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 PITPNAQ00169 270 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 PIN1Q13526 163 aaPredicted RBP17.46■□□□□ 0.39
PTPA-223ENST00000452489 GGTA1PQ4G0N0 100 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 ANXA8L1Q5VT79 327 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 LNX2Q8N448 690 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 FAM98AQ8NCA5 519 aaKnown RBP17.46■□□□□ 0.39
PTPA-223ENST00000452489 SETD7Q8WTS6 366 aaKnown RBP17.46■□□□□ 0.39
PTPA-223ENST00000452489 SORCS1Q8WY21 1168 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 RAD51AP1Q96B01 352 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 SLC22A14Q9Y267 594 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 PCDHB1Q9Y5F3 818 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 DOCK4Q8N1I0 1966 aa17.46■□□□□ 0.39
PTPA-223ENST00000452489 A0A1W2PQH9 124 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 ZNF729A6NN14 1252 aaPredicted RBP17.46■□□□□ 0.38
PTPA-223ENST00000452489 UBE2CO00762 179 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 SNAPC5O75971 98 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 ETHE1O95571 254 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 ANXA4P09525 319 aaPredicted RBP17.46■□□□□ 0.38
PTPA-223ENST00000452489 RPL3P39023 403 aaKnown RBP17.46■□□□□ 0.38
PTPA-223ENST00000452489 LHX1P48742 406 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 STARP49675 285 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 CDH11P55287 796 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 RAE1P78406 368 aaKnown RBP17.46■□□□□ 0.38
PTPA-223ENST00000452489 SMCO1Q147U7 214 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 DCAF12L2Q5VW00 463 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 PODNL1Q6PEZ8 512 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 FAM151BQ6UXP7 276 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 APOOLQ6UXV4 268 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 SERPINA9Q86WD7 417 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 SP7Q8TDD2 431 aaPredicted RBP17.46■□□□□ 0.38
PTPA-223ENST00000452489 NR4A3Q92570 626 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 PFDN5Q99471 154 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 ANGPT4Q9Y264 503 aa17.46■□□□□ 0.38
PTPA-223ENST00000452489 NPIPB8E9PQR5 432 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 PTGESO14684 152 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 OAZ2O95190 189 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 PRAMEF12O95522 483 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 PGDP52209 483 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 TLE2Q04725 743 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 ZNF630Q2M218 657 aaPredicted RBP17.45■□□□□ 0.38
PTPA-223ENST00000452489 ZNF322Q6U7Q0 402 aaPredicted RBP17.45■□□□□ 0.38
PTPA-223ENST00000452489 SYT9Q86SS6 491 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 NAA40Q86UY6 237 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 CFAP206Q8IYR0 622 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 OR6V1Q8N148 313 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 SMIM4Q8WVI0 70 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 GTF3AQ92664 365 aaKnown RBP17.45■□□□□ 0.38
PTPA-223ENST00000452489 KCNK12Q9HB15 430 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 RUVBL1Q9Y265 456 aaKnown RBP17.45■□□□□ 0.38
PTPA-223ENST00000452489 CH25HO95992 272 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 CD96P40200 585 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 RAB5BP61020 215 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 SHC2P98077 582 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 CHIT1Q13231 466 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 LINC00303Q3SY05 128 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 HEPHL1Q6MZM0 1159 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 H3F3CQ6NXT2 135 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 ARMC10Q8N2F6 343 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 OR1S2Q8NGQ3 325 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 TLNRD1Q9H1K6 362 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 PDFQ9HBH1 243 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 TXNRD2Q9NNW7 524 aa17.45■□□□□ 0.38
PTPA-223ENST00000452489 PGRMC2O15173 223 aa17.44■□□□□ 0.38
PTPA-223ENST00000452489 ARAFP10398 606 aa17.44■□□□□ 0.38
PTPA-223ENST00000452489 MUC1P15941 1255 aaPredicted RBP17.44■□□□□ 0.38
PTPA-223ENST00000452489 CD22P20273 847 aa17.44■□□□□ 0.38
PTPA-223ENST00000452489 CACNG1Q06432 222 aa17.44■□□□□ 0.38
PTPA-223ENST00000452489 CLEC12AQ5QGZ9 265 aa17.44■□□□□ 0.38
PTPA-223ENST00000452489 TRIM40Q6P9F5 258 aa17.44■□□□□ 0.38
PTPA-223ENST00000452489 IQCHQ86VS3 1027 aa17.44■□□□□ 0.38
PTPA-223ENST00000452489 POGLUT1Q8NBL1 392 aa17.44■□□□□ 0.38
PTPA-223ENST00000452489 STK35Q8TDR2 534 aa17.44■□□□□ 0.38
PTPA-223ENST00000452489 EID2BQ96D98 161 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms