RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 C17orf67Q0P5P2 114 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 SLC10A1Q14973 349 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 KLHL26Q53HC5 615 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 AP1ARQ63HQ0 302 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 GFRALQ6UXV0 394 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 FRRS1Q6ZNA5 592 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 ZNF619Q8N2I2 560 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 GALNT11Q8NCW6 608 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 ST6GALNAC3Q8NDV1 305 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 LRRC58Q96CX6 371 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 CMTM5Q96DZ9 223 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 THUMPD3Q9BV44 507 aaKnown RBP17.51■□□□□ 0.39
HOXA9-202ENST00000396345 HHATLQ9HCP6 504 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 DTNAQ9Y4J8 743 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 HRH3Q9Y5N1 445 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 NCKAP5O14513 1909 aa17.51■□□□□ 0.39
HOXA9-202ENST00000396345 H3BNH8 94 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 CDC40O60508 579 aaKnown RBP eCLIP17.5■□□□□ 0.39
HOXA9-202ENST00000396345 TRAPPC6AO75865 159 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 PDE9AO76083 593 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 CBX6O95503 412 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 BCHEP06276 602 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 CELA3AP09093 270 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 PRDX6P30041 224 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 MTPNP58546 118 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 SELPLGQ14242 412 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 GNA13Q14344 377 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 TOMM20Q15388 145 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 MAPK11Q15759 364 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 ZNF141Q15928 474 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 PDZK1Q5T2W1 519 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 GCNT6Q5T4J0 391 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 NANOGP8Q6NSW7 305 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 MISPQ8IVT2 679 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 ZNF614Q8N883 585 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 GATSQ8NAP1 163 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 OR4K17Q8NGC6 315 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 SLC38A5Q8WUX1 472 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 SLC39A3Q9BRY0 314 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 TRIM8Q9BZR9 551 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 SLC38A1Q9H2H9 487 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 UBQLN3Q9H347 655 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 DSN1Q9H410 356 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 NANOGQ9H9S0 305 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 A4GALTQ9NPC4 353 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 CALML5Q9NZT1 146 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 MED11Q9P086 117 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 KCNE5Q9UJ90 142 aa17.5■□□□□ 0.39
HOXA9-202ENST00000396345 ANKUB1A6NFN9 424 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 FXYD1O00168 92 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 NDUFAB1O14561 156 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 AIM2O14862 343 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 UGT2B17O75795 530 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 RNF144AP50876 292 aaPredicted RBP17.49■□□□□ 0.39
HOXA9-202ENST00000396345 CRISP3P54108 245 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 ELOAQ14241 798 aaKnown RBP17.49■□□□□ 0.39
HOXA9-202ENST00000396345 MTERF4Q7Z6M4 381 aaKnown RBP17.49■□□□□ 0.39
HOXA9-202ENST00000396345 GHDCQ8N2G8 530 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 C10orf111Q8N326 155 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 FADS6Q8N9I5 356 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 PHOSPHO1Q8TCT1 267 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 BCAS4Q8TDM0 211 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 MAL2Q969L2 176 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 DTNBP1Q96EV8 351 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 TMEM19Q96HH6 336 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 SH3GL1Q99961 368 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 RUBCNLQ9H714 662 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 MTHFD2LQ9H903 347 aaPredicted RBP17.49■□□□□ 0.39
HOXA9-202ENST00000396345 EFCAB1Q9HAE3 211 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 FBXL2Q9UKC9 423 aa17.49■□□□□ 0.39
HOXA9-202ENST00000396345 IGLV3-32A0A0A0MS00 114 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 C5orf58C9J3I9 102 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 GTPBP1O00178 669 aaKnown RBP17.48■□□□□ 0.39
HOXA9-202ENST00000396345 IGHG3P01860 377 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 HPNP05981 417 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 ARAFP10398 606 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 ENDOUP21128 410 aaKnown RBP17.48■□□□□ 0.39
HOXA9-202ENST00000396345 HSF1Q00613 529 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 CD226Q15762 336 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 MAPK14Q16539 360 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 OR2M3Q8NG83 312 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 OR8J3Q8NGG0 315 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 OIT3Q8WWZ8 545 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 PMM1Q92871 262 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 ZG16BQ96DA0 208 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 LDAHQ9H6V9 325 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 ACKR4Q9NPB9 350 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 PLSCR2Q9NRY7 297 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 LIPGQ9Y5X9 500 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 FREM3P0C091 2139 aa17.48■□□□□ 0.39
HOXA9-202ENST00000396345 ZGRF1Q86YA3 2104 aa17.47■□□□□ 0.39
HOXA9-202ENST00000396345 ZNF407Q9C0G0 2248 aa17.47■□□□□ 0.39
HOXA9-202ENST00000396345 A0A0G2JPF8 293 aa17.47■□□□□ 0.39
HOXA9-202ENST00000396345 CENPVL1A0A0U1RR11 272 aa17.47■□□□□ 0.39
HOXA9-202ENST00000396345 SERINC4A6NH21 518 aa17.47■□□□□ 0.39
HOXA9-202ENST00000396345 HNRNPCL2B2RXH8 293 aa17.47■□□□□ 0.39
HOXA9-202ENST00000396345 B4DXG7 233 aa17.47■□□□□ 0.39
HOXA9-202ENST00000396345 HNRNPCL3B7ZW38 293 aa17.47■□□□□ 0.39
HOXA9-202ENST00000396345 PYCARD-AS1I3L0S3 204 aa17.47■□□□□ 0.39
HOXA9-202ENST00000396345 HNRNPCL1O60812 293 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms