RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 ACE2P21192 770 aa3.71□□□□□ -1.82
snR42snR42 PER1P25625 357 aa3.71□□□□□ -1.82
snR42snR42 SRP40P32583 406 aaPredicted RBP3.71□□□□□ -1.82
snR42snR42 YKR018CP36114 725 aa3.71□□□□□ -1.82
snR42snR42 OSH3P38713 996 aaKnown RBP3.71□□□□□ -1.82
snR42snR42 PTC7P38797 343 aa3.71□□□□□ -1.82
snR42snR42 MRPS35P53292 345 aa3.71□□□□□ -1.82
snR42snR42 YAF9P53930 226 aa3.71□□□□□ -1.82
snR42snR42 UFD2P54860 961 aa3.71□□□□□ -1.82
snR42snR42 CTR9P89105 1077 aa3.71□□□□□ -1.82
snR42snR42 YML037CQ03703 340 aa3.71□□□□□ -1.82
snR42snR42 KAR5Q04746 504 aa3.71□□□□□ -1.82
snR42snR42 NKP2Q06162 153 aa3.71□□□□□ -1.82
snR42snR42 FPR4Q06205 392 aaPredicted RBP3.71□□□□□ -1.82
snR42snR42 UBX5Q06682 500 aa3.71□□□□□ -1.82
snR42snR42 YOR131CQ12486 218 aa3.71□□□□□ -1.82
snR42snR42 LSO1Q3E827 93 aa3.71□□□□□ -1.82
snR42snR42 RAD61Q99359 647 aa3.71□□□□□ -1.82
snR42snR42 CHO2P05374 869 aaKnown RBP3.7□□□□□ -1.82
snR42snR42 SAM2P19358 384 aaKnown RBP3.7□□□□□ -1.82
snR42snR42 NPR1P22211 790 aa3.7□□□□□ -1.82
snR42snR42 EUG1P32474 517 aa3.7□□□□□ -1.82
snR42snR42 SMY2P32909 740 aaKnown RBP3.7□□□□□ -1.82
snR42snR42 TOD6P34219 525 aa3.7□□□□□ -1.82
snR42snR42 REI1P38344 393 aaPredicted RBP3.7□□□□□ -1.82
snR42snR42 RIM11P38615 370 aa3.7□□□□□ -1.82
snR42snR42 TIF4631P39935 952 aaKnown RBP3.7□□□□□ -1.82
snR42snR42 VPS62P53285 467 aa3.7□□□□□ -1.82
snR42snR42 ECM16Q04217 1267 aaKnown RBP3.7□□□□□ -1.82
snR42snR42 MET7Q08645 548 aa3.7□□□□□ -1.82
snR42snR42 ALG6Q12001 544 aaKnown RBP3.7□□□□□ -1.82
snR42snR42 CMR1Q12510 522 aaKnown RBP3.7□□□□□ -1.82
snR42snR42 SAM1P10659 382 aaKnown RBP3.69□□□□□ -1.82
snR42snR42 OPI1P21957 404 aa3.69□□□□□ -1.82
snR42snR42 RIT1P23796 513 aa3.69□□□□□ -1.82
snR42snR42 CHS3P29465 1165 aa3.69□□□□□ -1.82
snR42snR42 NNK1P36003 928 aa3.69□□□□□ -1.82
snR42snR42 YHL050CP38721 697 aa3.69□□□□□ -1.82
snR42snR42 TOM71P38825 639 aaKnown RBP3.69□□□□□ -1.82
snR42snR42 VPS45P38932 577 aa3.69□□□□□ -1.82
snR42snR42 GPB2P39717 880 aa3.69□□□□□ -1.82
snR42snR42 GTS1P40956 396 aa3.69□□□□□ -1.82
snR42snR42 YJR107WP47145 328 aa3.69□□□□□ -1.82
snR42snR42 SOL4P53315 255 aa3.69□□□□□ -1.82
snR42snR42 BRE5P53741 515 aaKnown RBP3.69□□□□□ -1.82
snR42snR42 RPS15Q01855 142 aaKnown RBP3.69□□□□□ -1.82
snR42snR42 BUL2Q03758 920 aaKnown RBP3.69□□□□□ -1.82
snR42snR42 YPL277CQ08989 487 aa3.69□□□□□ -1.82
snR42snR42 RIM20Q12033 661 aa3.69□□□□□ -1.82
snR42snR42 RLF2Q12495 606 aa3.69□□□□□ -1.82
snR42snR42 RKM4Q12504 494 aa3.69□□□□□ -1.82
snR42snR42 LAM4P38800 1345 aa3.69□□□□□ -1.82
snR42snR42 RPS13P05756 151 aaKnown RBP3.68□□□□□ -1.82
snR42snR42 CDC16P09798 840 aa3.68□□□□□ -1.82
snR42snR42 RAD18P10862 487 aa3.68□□□□□ -1.82
snR42snR42 TPM1P17536 199 aaKnown RBP3.68□□□□□ -1.82
snR42snR42 PRE10P21242 288 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
snR42snR42 RPL8BP29453 256 aaKnown RBP3.68□□□□□ -1.82
snR42snR42 PRO3P32263 286 aaKnown RBP3.68□□□□□ -1.82
snR42snR42 IMP2'P32351 346 aa3.68□□□□□ -1.82
snR42snR42 UTR4P32626 227 aa3.68□□□□□ -1.82
snR42snR42 MXR1P40029 184 aa3.68□□□□□ -1.82
snR42snR42 KRI1P42846 591 aaKnown RBP3.68□□□□□ -1.82
snR42snR42 FOL1P53848 824 aa3.68□□□□□ -1.82
snR42snR42 VPS30Q02948 557 aa3.68□□□□□ -1.82
snR42snR42 SLD5Q03406 294 aa3.68□□□□□ -1.82
snR42snR42 CLU1Q03690 1277 aaKnown RBP3.68□□□□□ -1.82
snR42snR42 DUS4Q06063 367 aa3.68□□□□□ -1.82
snR42snR42 SKG3Q06315 1026 aa3.68□□□□□ -1.82
snR42snR42 ESF1Q06344 628 aaKnown RBP3.68□□□□□ -1.82
snR42snR42 ICL2Q12031 575 aa3.68□□□□□ -1.82
snR42snR42 SSF2Q12153 453 aaPredicted RBP3.68□□□□□ -1.82
snR42snR42 RAD50P12753 1312 aa3.68□□□□□ -1.82
snR42snR42 YLR358CO13565 187 aa3.67□□□□□ -1.82
snR42snR42 ANP1P32629 500 aa3.67□□□□□ -1.82
snR42snR42 RGT1P32862 1170 aa3.67□□□□□ -1.82
snR42snR42 YPT53P36019 220 aa3.67□□□□□ -1.82
snR42snR42 MAL31P38156 614 aa3.67□□□□□ -1.82
snR42snR42 PES4P39684 611 aa3.67□□□□□ -1.82
snR42snR42 VPS53P47061 822 aa3.67□□□□□ -1.82
snR42snR42 LSB1P53281 241 aa3.67□□□□□ -1.82
snR42snR42 ALD6P54115 500 aaKnown RBP3.67□□□□□ -1.82
snR42snR42 SPN1Q06505 410 aaPredicted RBP3.67□□□□□ -1.82
snR42snR42 MSC6Q08818 692 aaKnown RBP3.67□□□□□ -1.82
snR42snR42 SUT2Q12286 268 aa3.67□□□□□ -1.82
snR42snR42 PNS1Q12412 539 aa3.67□□□□□ -1.82
snR42snR42 NUC1P08466 329 aa3.66□□□□□ -1.82
snR42snR42 PWP2P25635 923 aaKnown RBP3.66□□□□□ -1.82
snR42snR42 RER2P35196 286 aa3.66□□□□□ -1.82
snR42snR42 SKI2P35207 1287 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
snR42snR42 MYO3P36006 1272 aa3.66□□□□□ -1.82
snR42snR42 UIP5P36137 443 aa3.66□□□□□ -1.82
snR42snR42 SHM2P37291 469 aaKnown RBP3.66□□□□□ -1.82
snR42snR42 ARL1P38116 183 aaKnown RBP3.66□□□□□ -1.82
snR42snR42 ECM2P38241 364 aaKnown RBP3.66□□□□□ -1.82
snR42snR42 PHO88P38264 188 aaPredicted RBP3.66□□□□□ -1.82
snR42snR42 CIC1P38779 376 aaKnown RBP3.66□□□□□ -1.82
snR42snR42 CRG1P38892 291 aaRIP-Chip data3.66□□□□□ -1.82not detected
snR42snR42 ALG2P43636 503 aa3.66□□□□□ -1.82
snR42snR42 YGR045CP53229 120 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms