RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeast

Gene YOP1, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOP1	YPR028W	APM1	Q00776	475 aa	Predicted RBP	3.22	□□□□□ -1.89
YOP1	YPR028W	CRR1	Q05790	422 aa		3.22	□□□□□ -1.89
YOP1	YPR028W	MRI1	Q06489	411 aa	Known RBP	3.22	□□□□□ -1.89
YOP1	YPR028W	DMC1	P25453	334 aa		3.21	□□□□□ -1.9
YOP1	YPR028W	RGT1	P32862	1170 aa		3.21	□□□□□ -1.9
YOP1	YPR028W	PET112	P33893	541 aa		3.21	□□□□□ -1.9
YOP1	YPR028W	SRP1	Q02821	542 aa	Known RBP	3.21	□□□□□ -1.9
YOP1	YPR028W	YLR225C	Q05948	407 aa	Known RBP	3.21	□□□□□ -1.9
YOP1	YPR028W	SWM1	Q12379	170 aa		3.21	□□□□□ -1.9
YOP1	YPR028W	CDC34	P14682	295 aa		3.2	□□□□□ -1.9
YOP1	YPR028W	SPO11	P23179	398 aa		3.2	□□□□□ -1.9
YOP1	YPR028W	SDP1	P40479	209 aa		3.2	□□□□□ -1.9
YOP1	YPR028W	FKH2	P41813	862 aa		3.2	□□□□□ -1.9
YOP1	YPR028W	STB2	P46679	850 aa		3.2	□□□□□ -1.9
YOP1	YPR028W	YJL163C	P46996	555 aa		3.2	□□□□□ -1.9
YOP1	YPR028W	EEB1	Q02891	456 aa		3.2	□□□□□ -1.9
YOP1	YPR028W	RMD1	Q03441	430 aa		3.2	□□□□□ -1.9
YOP1	YPR028W	SSL1	Q04673	461 aa	Predicted RBP	3.2	□□□□□ -1.9
YOP1	YPR028W	NOT3	P06102	836 aa	Known RBP	3.19	□□□□□ -1.9
YOP1	YPR028W	FBP1	P09201	348 aa		3.19	□□□□□ -1.9
YOP1	YPR028W	TUB3	P09734	445 aa	Known RBP	3.19	□□□□□ -1.9
YOP1	YPR028W	DUT1	P33317	147 aa		3.19	□□□□□ -1.9
YOP1	YPR028W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
YOP1	YPR028W	GYP7	P48365	746 aa		3.19	□□□□□ -1.9
YOP1	YPR028W	CDC12	P32468	407 aa	Known RBP	3.18	□□□□□ -1.9
YOP1	YPR028W	YBR053C	P38235	358 aa		3.18	□□□□□ -1.9
YOP1	YPR028W	YGR053C	P53234	283 aa		3.18	□□□□□ -1.9
YOP1	YPR028W	DAM1	P53267	343 aa		3.18	□□□□□ -1.9
YOP1	YPR028W	RPP1	P38786	293 aa		3.17	□□□□□ -1.9
YOP1	YPR028W	RIM13	Q03792	727 aa		3.17	□□□□□ -1.9
YOP1	YPR028W	STE13	P33894	931 aa		3.16	□□□□□ -1.9
YOP1	YPR028W	CBR1	P38626	284 aa	Known RBP	3.16	□□□□□ -1.9
YOP1	YPR028W	MET10	P39692	1035 aa		3.16	□□□□□ -1.9
YOP1	YPR028W	KRI1	P42846	591 aa	Known RBP	3.16	□□□□□ -1.9
YOP1	YPR028W	BPL1	P48445	690 aa	Predicted RBP	3.16	□□□□□ -1.9
YOP1	YPR028W	AMA1	P50082	593 aa		3.16	□□□□□ -1.9
YOP1	YPR028W	MRPS35	P53292	345 aa		3.16	□□□□□ -1.9
YOP1	YPR028W	DUS3	Q06053	668 aa	Known RBP	3.16	□□□□□ -1.9
YOP1	YPR028W	YKR078W	P36158	585 aa	Known RBP	3.15	□□□□□ -1.91
YOP1	YPR028W	SSL2	Q00578	843 aa		3.15	□□□□□ -1.91
YOP1	YPR028W	VPS30	Q02948	557 aa		3.15	□□□□□ -1.91
YOP1	YPR028W	SEG1	Q04279	960 aa		3.15	□□□□□ -1.91
YOP1	YPR028W	ESC2	Q06340	456 aa		3.15	□□□□□ -1.91
YOP1	YPR028W	HOM2	P13663	365 aa	Known RBP	3.14	□□□□□ -1.91
YOP1	YPR028W	ABD1	P32783	436 aa	Predicted RBP	3.14	□□□□□ -1.91
YOP1	YPR028W	MNR2	P35724	969 aa		3.14	□□□□□ -1.91
YOP1	YPR028W	CTF8	P38877	133 aa		3.14	□□□□□ -1.91
YOP1	YPR028W	YJL206C	P39529	758 aa		3.14	□□□□□ -1.91
YOP1	YPR028W	OYE2	Q03558	400 aa	Known RBP	3.14	□□□□□ -1.91
YOP1	YPR028W	RRP15	Q06511	250 aa	Predicted RBP	3.14	□□□□□ -1.91
YOP1	YPR028W	SGO1	Q08490	590 aa		3.14	□□□□□ -1.91
YOP1	YPR028W	IRC13	Q08630	104 aa		3.14	□□□□□ -1.91
YOP1	YPR028W	RGT2	Q12300	763 aa		3.14	□□□□□ -1.91
YOP1	YPR028W	PTP1	P25044	335 aa		3.13	□□□□□ -1.91
YOP1	YPR028W	CDC48	P25694	835 aa	Known RBP	3.13	□□□□□ -1.91
YOP1	YPR028W	PPH3	P32345	308 aa		3.13	□□□□□ -1.91
YOP1	YPR028W	RPD3	P32561	433 aa		3.13	□□□□□ -1.91
YOP1	YPR028W	EMP70	P32802	667 aa		3.13	□□□□□ -1.91
YOP1	YPR028W	TSL1	P38427	1098 aa	Known RBP	3.13	□□□□□ -1.91
YOP1	YPR028W	YEL020C	P39994	560 aa		3.13	□□□□□ -1.91
YOP1	YPR028W	YIL108W	P40483	696 aa	Known RBP	3.13	□□□□□ -1.91
YOP1	YPR028W	BNA3	P47039	444 aa	Known RBP	3.13	□□□□□ -1.91
YOP1	YPR028W	RPN13	O13563	156 aa		3.12	□□□□□ -1.91
YOP1	YPR028W	ASF1	P32447	279 aa		3.12	□□□□□ -1.91
YOP1	YPR028W	YBR238C	P38330	731 aa	Known RBP	3.12	□□□□□ -1.91
YOP1	YPR028W	MBP1	P39678	833 aa		3.12	□□□□□ -1.91
YOP1	YPR028W	YKE2	P52553	114 aa		3.12	□□□□□ -1.91
YOP1	YPR028W	MPS1	P54199	764 aa		3.12	□□□□□ -1.91
YOP1	YPR028W	TAF3	Q12297	353 aa		3.12	□□□□□ -1.91
YOP1	YPR028W	SMX3	P54999	86 aa	Predicted RBP	3.11	□□□□□ -1.91
YOP1	YPR028W	TDA9	Q04545	1251 aa		3.11	□□□□□ -1.91
YOP1	YPR028W	YDR306C	Q06640	478 aa		3.11	□□□□□ -1.91
YOP1	YPR028W	FAL1	Q12099	399 aa	Known RBP	3.11	□□□□□ -1.91
YOP1	YPR028W	PRP4	P20053	465 aa	Known RBP	3.1	□□□□□ -1.91
YOP1	YPR028W	RFA1	P22336	621 aa	Known RBP	3.1	□□□□□ -1.91
YOP1	YPR028W	VPS34	P22543	875 aa		3.1	□□□□□ -1.91
YOP1	YPR028W	HEM3	P28789	327 aa		3.1	□□□□□ -1.91
YOP1	YPR028W	YIR042C	P40586	236 aa		3.1	□□□□□ -1.91
YOP1	YPR028W	CCT7	P42943	550 aa	Known RBP	3.1	□□□□□ -1.91
YOP1	YPR028W	NET1	P47035	1189 aa		3.1	□□□□□ -1.91
YOP1	YPR028W	FAA4	P47912	694 aa	Known RBP	3.1	□□□□□ -1.91
YOP1	YPR028W	GDE1	Q02979	1223 aa		3.1	□□□□□ -1.91
YOP1	YPR028W	ADE8	P04161	214 aa		3.09	□□□□□ -1.91
YOP1	YPR028W	SBA1	P28707	216 aa	Known RBP	3.09	□□□□□ -1.91
YOP1	YPR028W	HIS7	P33734	552 aa	Known RBP	3.09	□□□□□ -1.91
YOP1	YPR028W	FMP52	P40008	231 aa		3.09	□□□□□ -1.91
YOP1	YPR028W	LTP1	P40347	161 aa		3.09	□□□□□ -1.91
YOP1	YPR028W	VHR1	P40522	640 aa		3.09	□□□□□ -1.91
YOP1	YPR028W	HSV2	P50079	448 aa	Predicted RBP	3.09	□□□□□ -1.91
YOP1	YPR028W	TEL2	P53038	688 aa		3.09	□□□□□ -1.91
YOP1	YPR028W	AGP1	P25376	633 aa		3.08	□□□□□ -1.92
YOP1	YPR028W	AAR2	P32357	355 aa	Predicted RBP	3.08	□□□□□ -1.92
YOP1	YPR028W	TYE7	P33122	291 aa	Predicted RBP	3.08	□□□□□ -1.92
YOP1	YPR028W	YHR078W	P38799	552 aa		3.08	□□□□□ -1.92
YOP1	YPR028W	GGA2	P38817	585 aa	Known RBP	3.08	□□□□□ -1.92
YOP1	YPR028W	CEP3	P40969	608 aa		3.08	□□□□□ -1.92
YOP1	YPR028W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
YOP1	YPR028W	TPO2	P53283	614 aa		3.07	□□□□□ -1.92
YOP1	YPR028W	PKH1	Q03407	766 aa		3.07	□□□□□ -1.92
YOP1	YPR028W	YML020W	Q03722	664 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms