RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W RSB1Q08417 382 aa6.53□□□□□ -1.36
HFI1YPL254W RAD4P14736 754 aa6.52□□□□□ -1.37
HFI1YPL254W PUB1P32588 453 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
HFI1YPL254W CAB3P36076 571 aa6.52□□□□□ -1.37
HFI1YPL254W SPO1P53541 631 aa6.52□□□□□ -1.37
HFI1YPL254W NKP2Q06162 153 aa6.52□□□□□ -1.37
HFI1YPL254W RRP5Q05022 1729 aaKnown RBP6.51□□□□□ -1.37
HFI1YPL254W MSP1P28737 362 aa6.51□□□□□ -1.37
HFI1YPL254W UGA2P38067 497 aa6.51□□□□□ -1.37
HFI1YPL254W OCA5P38738 679 aa6.51□□□□□ -1.37
HFI1YPL254W IRR1P40541 1150 aa6.51□□□□□ -1.37
HFI1YPL254W YJL049WP47048 450 aa6.51□□□□□ -1.37
HFI1YPL254W CTH1P47976 325 aa6.51□□□□□ -1.37
HFI1YPL254W ZDS1P50111 915 aaKnown RBP6.51□□□□□ -1.37
HFI1YPL254W INP52P50942 1183 aa6.51□□□□□ -1.37
HFI1YPL254W YNL050CP53952 270 aa6.51□□□□□ -1.37
HFI1YPL254W ACM1Q08981 209 aa6.51□□□□□ -1.37
HFI1YPL254W APC1P53886 1748 aa6.5□□□□□ -1.37
HFI1YPL254W MAC1P35192 417 aa6.5□□□□□ -1.37
HFI1YPL254W PBY1P38254 753 aa6.5□□□□□ -1.37
HFI1YPL254W YNG2P38806 282 aaKnown RBP6.5□□□□□ -1.37
HFI1YPL254W GEM1P39722 662 aa6.5□□□□□ -1.37
HFI1YPL254W YOL098CQ12496 1037 aa6.5□□□□□ -1.37
HFI1YPL254W EBP2P36049 427 aaKnown RBP6.49□□□□□ -1.37
HFI1YPL254W YIL177CP40434 1758 aa6.49□□□□□ -1.37
HFI1YPL254W YJL225CP40889 1758 aa6.49□□□□□ -1.37
HFI1YPL254W RAD50P12753 1312 aa6.49□□□□□ -1.37
HFI1YPL254W HSP104P31539 908 aaKnown RBP6.48□□□□□ -1.37
HFI1YPL254W SLA2P33338 968 aa6.48□□□□□ -1.37
HFI1YPL254W RFC1P38630 861 aaKnown RBP6.48□□□□□ -1.37
HFI1YPL254W NMD2P38798 1089 aaKnown RBP6.48□□□□□ -1.37
HFI1YPL254W TIM54P47045 478 aa6.48□□□□□ -1.37
HFI1YPL254W BMS1Q08965 1183 aaKnown RBP6.48□□□□□ -1.37
HFI1YPL254W YRF1-2P40105 1681 aa6.48□□□□□ -1.37
HFI1YPL254W TY4B-HP0C2J7 1802 aa6.48□□□□□ -1.37
HFI1YPL254W TY4B-JP47024 1803 aa6.48□□□□□ -1.37
HFI1YPL254W SPS1P08458 490 aa6.47□□□□□ -1.37
HFI1YPL254W RAD24P32641 659 aa6.47□□□□□ -1.37
HFI1YPL254W HSP78P33416 811 aa6.47□□□□□ -1.37
HFI1YPL254W BRN1P38170 754 aa6.47□□□□□ -1.37
HFI1YPL254W SPO75Q07798 868 aa6.47□□□□□ -1.37
HFI1YPL254W LPX1Q12405 387 aaKnown RBP6.47□□□□□ -1.37
HFI1YPL254W MAM1P40065 302 aa6.47□□□□□ -1.37
HFI1YPL254W IOC3P43596 787 aa6.47□□□□□ -1.37
HFI1YPL254W FMP25Q08023 583 aa6.47□□□□□ -1.37
HFI1YPL254W CDC53Q12018 815 aaKnown RBP6.47□□□□□ -1.37
HFI1YPL254W LSP1Q12230 341 aaKnown RBP6.47□□□□□ -1.37
HFI1YPL254W BI4P03879 638 aa6.46□□□□□ -1.38
HFI1YPL254W RPL8BP29453 256 aaKnown RBP6.46□□□□□ -1.38
HFI1YPL254W SRP40P32583 406 aaPredicted RBP6.46□□□□□ -1.38
HFI1YPL254W PFD1P46988 109 aa6.46□□□□□ -1.38
HFI1YPL254W FOL2P51601 243 aaKnown RBP6.46□□□□□ -1.38
HFI1YPL254W HUL5P53119 910 aa6.46□□□□□ -1.38
HFI1YPL254W YGL081WP53156 320 aa6.46□□□□□ -1.38
HFI1YPL254W NSE3Q05541 303 aa6.46□□□□□ -1.38
HFI1YPL254W OSH2Q12451 1283 aa6.46□□□□□ -1.38
HFI1YPL254W NUP145P49687 1317 aa6.45□□□□□ -1.38
HFI1YPL254W SWC3P31376 625 aa6.45□□□□□ -1.38
HFI1YPL254W ECM16Q04217 1267 aaKnown RBP6.45□□□□□ -1.38
HFI1YPL254W DUS3Q06053 668 aaKnown RBP6.45□□□□□ -1.38
HFI1YPL254W EAF1Q06337 982 aa6.45□□□□□ -1.38
HFI1YPL254W YDR306CQ06640 478 aa6.45□□□□□ -1.38
HFI1YPL254W BDF2Q07442 638 aa6.45□□□□□ -1.38
HFI1YPL254W THS1P04801 734 aaKnown RBP6.44□□□□□ -1.38
HFI1YPL254W SAH1P39954 449 aaKnown RBP6.44□□□□□ -1.38
HFI1YPL254W ALR2P43553 858 aa6.44□□□□□ -1.38
HFI1YPL254W NPA3P47122 385 aa6.44□□□□□ -1.38
HFI1YPL254W YGR125WP53273 1036 aa6.44□□□□□ -1.38
HFI1YPL254W SVS1Q12254 260 aa6.44□□□□□ -1.38
HFI1YPL254W EDE1P34216 1381 aa6.44□□□□□ -1.38
HFI1YPL254W RPS19AP07280 144 aaKnown RBP6.43□□□□□ -1.38
HFI1YPL254W RPS19BP07281 144 aaPredicted RBP6.43□□□□□ -1.38
HFI1YPL254W STI1P15705 589 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
HFI1YPL254W PRP9P19736 530 aaKnown RBP6.43□□□□□ -1.38
HFI1YPL254W SEC26P41810 973 aaKnown RBP6.43□□□□□ -1.38
HFI1YPL254W ERP6P53198 216 aa6.43□□□□□ -1.38
HFI1YPL254W ORC3P54790 616 aa6.43□□□□□ -1.38
HFI1YPL254W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
HFI1YPL254W HRQ1Q05549 1077 aa6.43□□□□□ -1.38
HFI1YPL254W UBX5Q06682 500 aa6.43□□□□□ -1.38
HFI1YPL254W ARE1P25628 610 aa6.42□□□□□ -1.38
HFI1YPL254W AAR2P32357 355 aaPredicted RBP6.42□□□□□ -1.38
HFI1YPL254W YKL151CP36059 337 aa6.42□□□□□ -1.38
HFI1YPL254W POL12P38121 705 aaPredicted RBP6.42□□□□□ -1.38
HFI1YPL254W RFC5P38251 354 aa6.42□□□□□ -1.38
HFI1YPL254W GUS1P46655 708 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
HFI1YPL254W SRP1Q02821 542 aaKnown RBP6.42□□□□□ -1.38
HFI1YPL254W FLC1Q08967 793 aa6.42□□□□□ -1.38
HFI1YPL254W URB1P34241 1764 aaKnown RBP6.41□□□□□ -1.38
HFI1YPL254W HSP60P19882 572 aaKnown RBP6.41□□□□□ -1.38
HFI1YPL254W YKL091CP33324 310 aaKnown RBP6.41□□□□□ -1.38
HFI1YPL254W ZDS2P54786 942 aa6.41□□□□□ -1.38
HFI1YPL254W VPS20Q04272 221 aa6.41□□□□□ -1.38
HFI1YPL254W YOR131CQ12486 218 aa6.41□□□□□ -1.38
HFI1YPL254W NOT3P06102 836 aaKnown RBP6.41□□□□□ -1.38
HFI1YPL254W MRP7P12687 371 aa6.41□□□□□ -1.38
HFI1YPL254W ACE2P21192 770 aa6.41□□□□□ -1.38
HFI1YPL254W ABZ1P37254 787 aaPredicted RBP6.41□□□□□ -1.38
HFI1YPL254W YHR020WP38708 688 aaKnown RBP6.41□□□□□ -1.38
HFI1YPL254W ETP1P38748 585 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms