RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	VPS15	P22219	1454 aa		4.81	□□□□□ -1.64
TPM1	YNL079C	CAT8	P39113	1433 aa		4.8	□□□□□ -1.64
TPM1	YNL079C	PHO8	P11491	566 aa		4.8	□□□□□ -1.64
TPM1	YNL079C	KIN2	P13186	1147 aa	Known RBP	4.8	□□□□□ -1.64
TPM1	YNL079C	MAC1	P35192	417 aa		4.8	□□□□□ -1.64
TPM1	YNL079C	YKR078W	P36158	585 aa	Known RBP	4.8	□□□□□ -1.64
TPM1	YNL079C	ERT1	P38140	529 aa		4.8	□□□□□ -1.64
TPM1	YNL079C	ETP1	P38748	585 aa	Known RBP	4.8	□□□□□ -1.64
TPM1	YNL079C	YAP1801	P38856	637 aa		4.8	□□□□□ -1.64
TPM1	YNL079C	TOK1	P40310	691 aa		4.8	□□□□□ -1.64
TPM1	YNL079C	UBP6	P43593	499 aa	Known RBP	4.8	□□□□□ -1.64
TPM1	YNL079C	SIZ1	Q04195	904 aa		4.8	□□□□□ -1.64
TPM1	YNL079C	MET5	P47169	1442 aa		4.8	□□□□□ -1.64
TPM1	YNL079C	YBT1	P32386	1661 aa		4.8	□□□□□ -1.64
TPM1	YNL079C	PPG1	P32838	368 aa		4.79	□□□□□ -1.64
TPM1	YNL079C	REC104	P33323	182 aa		4.79	□□□□□ -1.64
TPM1	YNL079C	POL12	P38121	705 aa	Predicted RBP	4.79	□□□□□ -1.64
TPM1	YNL079C	YER158C	P40095	573 aa		4.79	□□□□□ -1.64
TPM1	YNL079C	SFB2	P53953	876 aa		4.79	□□□□□ -1.64
TPM1	YNL079C	MSC2	Q03455	724 aa		4.79	□□□□□ -1.64
TPM1	YNL079C	YLR125W	Q12138	136 aa		4.79	□□□□□ -1.64
TPM1	YNL079C	YDL177C	Q12257	170 aa		4.79	□□□□□ -1.64
TPM1	YNL079C	DFG16	Q99234	619 aa		4.79	□□□□□ -1.64
TPM1	YNL079C	PDR12	Q02785	1511 aa		4.78	□□□□□ -1.64
TPM1	YNL079C	CYC1	P00044	109 aa	Predicted RBP	4.78	□□□□□ -1.64
TPM1	YNL079C	TOM70	P07213	617 aa	Known RBP	4.78	□□□□□ -1.64
TPM1	YNL079C	SRM1	P21827	482 aa		4.78	□□□□□ -1.64
TPM1	YNL079C	CDC48	P25694	835 aa	Known RBP	4.78	□□□□□ -1.64
TPM1	YNL079C	LRG1	P35688	1017 aa		4.78	□□□□□ -1.64
TPM1	YNL079C	RRP14	P36080	434 aa	Known RBP	4.78	□□□□□ -1.64
TPM1	YNL079C	ECM21	P38167	1117 aa	Known RBP	4.78	□□□□□ -1.64
TPM1	YNL079C	YBR238C	P38330	731 aa	Known RBP	4.78	□□□□□ -1.64
TPM1	YNL079C	CCM1	P48237	864 aa	Predicted RBP	4.78	□□□□□ -1.64
TPM1	YNL079C	YKE2	P52553	114 aa		4.78	□□□□□ -1.64
TPM1	YNL079C	ALG12	P53730	551 aa		4.78	□□□□□ -1.64
TPM1	YNL079C	CMP2	P14747	604 aa		4.77	□□□□□ -1.65
TPM1	YNL079C	GDH3	P39708	457 aa		4.77	□□□□□ -1.65
TPM1	YNL079C	GAL10	P04397	699 aa		4.76	□□□□□ -1.65
TPM1	YNL079C	MET6	P05694	767 aa	Known RBP	4.76	□□□□□ -1.65
TPM1	YNL079C	THI4	P32318	326 aa		4.76	□□□□□ -1.65
TPM1	YNL079C	RPC82	P32349	654 aa		4.76	□□□□□ -1.65
TPM1	YNL079C	HSV2	P50079	448 aa	Predicted RBP	4.76	□□□□□ -1.65
TPM1	YNL079C	PDR10	P51533	1564 aa		4.76	□□□□□ -1.65
TPM1	YNL079C	MAL11	P53048	616 aa		4.76	□□□□□ -1.65
TPM1	YNL079C	YPR196W	Q06595	470 aa		4.76	□□□□□ -1.65
TPM1	YNL079C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
TPM1	YNL079C	GDB1	Q06625	1536 aa		4.76	□□□□□ -1.65
TPM1	YNL079C	ECL1	P48235	211 aa		4.75	□□□□□ -1.65
TPM1	YNL079C	SNO2	P53823	222 aa		4.75	□□□□□ -1.65
TPM1	YNL079C	SPO14	P36126	1683 aa		4.75	□□□□□ -1.65
TPM1	YNL079C	YRF1-1	P0CX20	1796 aa		4.75	□□□□□ -1.65
TPM1	YNL079C	YRF1-5	P0CX21	1796 aa		4.75	□□□□□ -1.65
TPM1	YNL079C	YRF1-8	P0CX22	1796 aa		4.75	□□□□□ -1.65
TPM1	YNL079C	NUP157	P40064	1391 aa	Known RBP	4.75	□□□□□ -1.65
TPM1	YNL079C	ARO1	P08566	1588 aa	Known RBP	4.74	□□□□□ -1.65
TPM1	YNL079C	SRB8	P25648	1427 aa		4.74	□□□□□ -1.65
TPM1	YNL079C	MSH2	P25847	964 aa		4.74	□□□□□ -1.65
TPM1	YNL079C	ZRG8	P40021	1076 aa		4.74	□□□□□ -1.65
TPM1	YNL079C	ALG2	P43636	503 aa		4.74	□□□□□ -1.65
TPM1	YNL079C	MRPL22	P53881	309 aa		4.74	□□□□□ -1.65
TPM1	YNL079C	PLB2	Q03674	706 aa		4.74	□□□□□ -1.65
TPM1	YNL079C	SGD1	Q06132	899 aa		4.74	□□□□□ -1.65
TPM1	YNL079C	ENV7	Q12003	364 aa		4.74	□□□□□ -1.65
TPM1	YNL079C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
TPM1	YNL079C	SEG2	P34250	1132 aa		4.73	□□□□□ -1.65
TPM1	YNL079C	LAM1	P38851	1228 aa		4.73	□□□□□ -1.65
TPM1	YNL079C	MND2	P40577	368 aa		4.73	□□□□□ -1.65
TPM1	YNL079C	YGR012W	P53206	393 aa		4.73	□□□□□ -1.65
TPM1	YNL079C	YGR283C	P53336	341 aa	Predicted RBP	4.73	□□□□□ -1.65
TPM1	YNL079C	ROT1	Q03691	256 aa		4.73	□□□□□ -1.65
TPM1	YNL079C	POB3	Q04636	552 aa	Known RBP	4.73	□□□□□ -1.65
TPM1	YNL079C	CDA1	Q06702	301 aa		4.73	□□□□□ -1.65
TPM1	YNL079C	NOT3	P06102	836 aa	Known RBP	4.72	□□□□□ -1.65
TPM1	YNL079C	HSF1	P10961	833 aa		4.72	□□□□□ -1.65
TPM1	YNL079C	ENA1	P13587	1091 aa		4.72	□□□□□ -1.65
TPM1	YNL079C	SRP101	P32916	621 aa		4.72	□□□□□ -1.65
TPM1	YNL079C	TSA1	P34760	196 aa	Known RBP	4.72	□□□□□ -1.65
TPM1	YNL079C	GYP8	P43570	497 aa		4.72	□□□□□ -1.65
TPM1	YNL079C	ENA2	Q01896	1091 aa		4.72	□□□□□ -1.65
TPM1	YNL079C	YOR352W	Q08816	343 aa		4.72	□□□□□ -1.65
TPM1	YNL079C	ENA5	Q12691	1091 aa		4.72	□□□□□ -1.65
TPM1	YNL079C	MPH2	P0CD99	609 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	RAD53	P22216	821 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	SPC29	P33419	253 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	STE13	P33894	931 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	EMC3	P36039	253 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	MEF2	P39677	819 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	NIT3	P49954	291 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	DAM1	P53267	343 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	DOS2	P54858	310 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	UGO1	Q03327	502 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	MDM12	Q92328	271 aa		4.71	□□□□□ -1.66
TPM1	YNL079C	RFA1	P22336	621 aa	Known RBP	4.7	□□□□□ -1.66
TPM1	YNL079C	RAI1	P53063	387 aa	Known RBP	4.7	□□□□□ -1.66
TPM1	YNL079C	PBP1	P53297	722 aa	Known RBP	4.7	□□□□□ -1.66
TPM1	YNL079C	ATP25	Q03153	612 aa		4.7	□□□□□ -1.66
TPM1	YNL079C	DUS4	Q06063	367 aa		4.7	□□□□□ -1.66
TPM1	YNL079C	CDA2	Q06703	312 aa		4.7	□□□□□ -1.66
TPM1	YNL079C	TPO1	Q07824	586 aa		4.7	□□□□□ -1.66
TPM1	YNL079C	NTG2	Q08214	380 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 54 ms