RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W URA1P28272 314 aaPredicted RBP5.66□□□□□ -1.5
YML040WYML040W PRP19P32523 503 aaKnown RBP5.66□□□□□ -1.5
YML040WYML040W DUG1P43616 481 aaKnown RBP5.66□□□□□ -1.5
YML040WYML040W NBA1Q08229 501 aaKnown RBP5.66□□□□□ -1.5
YML040WYML040W YTM1Q12024 460 aaPredicted RBP5.66□□□□□ -1.5
YML040WYML040W TMA7Q3E764 64 aaKnown RBP5.66□□□□□ -1.5
YML040WYML040W YBR182C-AQ8TGU6 64 aa5.66□□□□□ -1.5
YML040WYML040W NOT3P06102 836 aaKnown RBP5.65□□□□□ -1.51
YML040WYML040W CCR4P31384 837 aaKnown RBP5.65□□□□□ -1.51
YML040WYML040W PLC1P32383 869 aa5.65□□□□□ -1.51
YML040WYML040W PMC1P38929 1173 aaPredicted RBP5.65□□□□□ -1.51
YML040WYML040W OAF1P39720 1047 aaPredicted RBP5.65□□□□□ -1.51
YML040WYML040W NHX1Q04121 633 aa5.65□□□□□ -1.51
YML040WYML040W SIZ1Q04195 904 aa5.65□□□□□ -1.51
YML040WYML040W YPR196WQ06595 470 aa5.65□□□□□ -1.51
YML040WYML040W TRE2Q08693 809 aa5.65□□□□□ -1.51
YML040WYML040W MSB1P21339 1137 aaKnown RBP5.64□□□□□ -1.51
YML040WYML040W STE13P33894 931 aa5.64□□□□□ -1.51
YML040WYML040W RLP7P40693 322 aaKnown RBP5.64□□□□□ -1.51
YML040WYML040W GZF3P42944 551 aaKnown RBP5.64□□□□□ -1.51
YML040WYML040W NIT2P47016 307 aa5.64□□□□□ -1.51
YML040WYML040W ALY2P47029 1046 aa5.64□□□□□ -1.51
YML040WYML040W NSG2P53898 299 aa5.64□□□□□ -1.51
YML040WYML040W SND1Q04007 877 aa5.64□□□□□ -1.51
YML040WYML040W SLX4Q12098 748 aa5.64□□□□□ -1.51
YML040WYML040W RFC5P38251 354 aa5.63□□□□□ -1.51
YML040WYML040W CCT5P40413 562 aaKnown RBP5.63□□□□□ -1.51
YML040WYML040W MSC2Q03455 724 aa5.63□□□□□ -1.51
YML040WYML040W CDA1Q06702 301 aa5.63□□□□□ -1.51
YML040WYML040W ATP4P05626 244 aa5.62□□□□□ -1.51
YML040WYML040W RFA1P22336 621 aaKnown RBP5.62□□□□□ -1.51
YML040WYML040W AIM26P32858 118 aa5.62□□□□□ -1.51
YML040WYML040W PTC7P38797 343 aa5.62□□□□□ -1.51
YML040WYML040W RPN10P38886 268 aaKnown RBP5.62□□□□□ -1.51
YML040WYML040W GPP2P40106 250 aaKnown RBP5.62□□□□□ -1.51
YML040WYML040W GTS1P40956 396 aa5.62□□□□□ -1.51
YML040WYML040W MNN11P46985 422 aaKnown RBP5.62□□□□□ -1.51
YML040WYML040W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
YML040WYML040W PEX14P53112 341 aa5.62□□□□□ -1.51
YML040WYML040W YNL034WP53963 612 aa5.62□□□□□ -1.51
YML040WYML040W YNL018CP53976 612 aa5.62□□□□□ -1.51
YML040WYML040W YKR011CQ02209 353 aa5.62□□□□□ -1.51
YML040WYML040W YMR187CQ03236 431 aa5.62□□□□□ -1.51
YML040WYML040W THI21Q08975 551 aa5.62□□□□□ -1.51
YML040WYML040W YLR122CQ12312 125 aa5.62□□□□□ -1.51
YML040WYML040W SPS1P08458 490 aa5.61□□□□□ -1.51
YML040WYML040W FBP1P09201 348 aa5.61□□□□□ -1.51
YML040WYML040W APL1P27351 700 aa5.61□□□□□ -1.51
YML040WYML040W CYS3P31373 394 aaKnown RBP5.61□□□□□ -1.51
YML040WYML040W HSL7P38274 827 aa5.61□□□□□ -1.51
YML040WYML040W SKN7P38889 622 aa5.61□□□□□ -1.51
YML040WYML040W UBC9P50623 157 aaPredicted RBP5.61□□□□□ -1.51
YML040WYML040W RAI1P53063 387 aaKnown RBP5.61□□□□□ -1.51
YML040WYML040W ECM9Q02202 377 aa5.61□□□□□ -1.51
YML040WYML040W YPL034WQ03083 165 aa5.61□□□□□ -1.51
YML040WYML040W SSY1Q03770 852 aa5.61□□□□□ -1.51
YML040WYML040W LPX1Q12405 387 aaKnown RBP5.61□□□□□ -1.51
YML040WYML040W DIF1O13577 133 aa5.6□□□□□ -1.51
YML040WYML040W GCD1P09032 578 aaPredicted RBP5.6□□□□□ -1.51
YML040WYML040W RPD3P32561 433 aa5.6□□□□□ -1.51
YML040WYML040W TFC4P33339 1025 aa5.6□□□□□ -1.51
YML040WYML040W TAT1P38085 619 aa5.6□□□□□ -1.51
YML040WYML040W SET5P38890 526 aaKnown RBP5.6□□□□□ -1.51
YML040WYML040W RET2P43621 546 aa5.6□□□□□ -1.51
YML040WYML040W PHM7Q12252 991 aa5.6□□□□□ -1.51
YML040WYML040W PIF1P07271 859 aa5.59□□□□□ -1.51
YML040WYML040W AEP2P22136 580 aa5.59□□□□□ -1.51
YML040WYML040W COQ2P32378 372 aa5.59□□□□□ -1.51
YML040WYML040W DAL3P32459 195 aa5.59□□□□□ -1.51
YML040WYML040W SRP101P32916 621 aa5.59□□□□□ -1.51
YML040WYML040W SWE1P32944 819 aa5.59□□□□□ -1.51
YML040WYML040W TYE7P33122 291 aaPredicted RBP5.59□□□□□ -1.51
YML040WYML040W HXT6P39003 570 aaKnown RBP5.59□□□□□ -1.51
YML040WYML040W HXT7P39004 570 aa5.59□□□□□ -1.51
YML040WYML040W PEA2P40091 420 aa5.59□□□□□ -1.51
YML040WYML040W CEP3P40969 608 aa5.59□□□□□ -1.51
YML040WYML040W MCA1Q08601 432 aa5.59□□□□□ -1.51
YML040WYML040W YPR053CQ6Q5F3 151 aa5.59□□□□□ -1.51
YML040WYML040W YLR149CQ99296 730 aa5.59□□□□□ -1.51
YML040WYML040W MPD2Q99316 277 aa5.59□□□□□ -1.51
YML040WYML040W HSF1P10961 833 aa5.58□□□□□ -1.52
YML040WYML040W SST2P11972 698 aaKnown RBP5.58□□□□□ -1.52
YML040WYML040W KIN2P13186 1147 aaKnown RBP5.58□□□□□ -1.52
YML040WYML040W CHS2P14180 963 aa5.58□□□□□ -1.52
YML040WYML040W HIR1P32479 840 aa5.58□□□□□ -1.52
YML040WYML040W DID4P36108 232 aa5.58□□□□□ -1.52
YML040WYML040W YKR051WP36142 418 aa5.58□□□□□ -1.52
YML040WYML040W BNA2P47125 453 aa5.58□□□□□ -1.52
YML040WYML040W ENV11P53246 860 aa5.58□□□□□ -1.52
YML040WYML040W SSL1Q04673 461 aaPredicted RBP5.58□□□□□ -1.52
YML040WYML040W YOR022CQ12204 715 aa5.58□□□□□ -1.52
YML040WYML040W RPS9AO13516 197 aaKnown RBP5.57□□□□□ -1.52
YML040WYML040W VPS24P36095 224 aaKnown RBP5.57□□□□□ -1.52
YML040WYML040W DOT6P40059 670 aaKnown RBP5.57□□□□□ -1.52
YML040WYML040W YGR153WP48238 217 aa5.57□□□□□ -1.52
YML040WYML040W ZIP2P53061 704 aa5.57□□□□□ -1.52
YML040WYML040W YGR012WP53206 393 aa5.57□□□□□ -1.52
YML040WYML040W ORC3P54790 616 aa5.57□□□□□ -1.52
YML040WYML040W RSM24Q03976 319 aa5.57□□□□□ -1.52
YML040WYML040W HFI1Q12060 488 aa5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms