RNA–Protein interactions for RNA: YLR227W-A

YLR227W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YLR227W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-AYLR227W-A URA1P28272 314 aaPredicted RBP5.66□□□□□ -1.5
YLR227W-AYLR227W-A PRP19P32523 503 aaKnown RBP5.66□□□□□ -1.5
YLR227W-AYLR227W-A DUG1P43616 481 aaKnown RBP5.66□□□□□ -1.5
YLR227W-AYLR227W-A NBA1Q08229 501 aaKnown RBP5.66□□□□□ -1.5
YLR227W-AYLR227W-A YTM1Q12024 460 aaPredicted RBP5.66□□□□□ -1.5
YLR227W-AYLR227W-A TMA7Q3E764 64 aaKnown RBP5.66□□□□□ -1.5
YLR227W-AYLR227W-A YBR182C-AQ8TGU6 64 aa5.66□□□□□ -1.5
YLR227W-AYLR227W-A NOT3P06102 836 aaKnown RBP5.65□□□□□ -1.51
YLR227W-AYLR227W-A CCR4P31384 837 aaKnown RBP5.65□□□□□ -1.51
YLR227W-AYLR227W-A PLC1P32383 869 aa5.65□□□□□ -1.51
YLR227W-AYLR227W-A PMC1P38929 1173 aaPredicted RBP5.65□□□□□ -1.51
YLR227W-AYLR227W-A OAF1P39720 1047 aaPredicted RBP5.65□□□□□ -1.51
YLR227W-AYLR227W-A NHX1Q04121 633 aa5.65□□□□□ -1.51
YLR227W-AYLR227W-A SIZ1Q04195 904 aa5.65□□□□□ -1.51
YLR227W-AYLR227W-A YPR196WQ06595 470 aa5.65□□□□□ -1.51
YLR227W-AYLR227W-A TRE2Q08693 809 aa5.65□□□□□ -1.51
YLR227W-AYLR227W-A MSB1P21339 1137 aaKnown RBP5.64□□□□□ -1.51
YLR227W-AYLR227W-A STE13P33894 931 aa5.64□□□□□ -1.51
YLR227W-AYLR227W-A RLP7P40693 322 aaKnown RBP5.64□□□□□ -1.51
YLR227W-AYLR227W-A GZF3P42944 551 aaKnown RBP5.64□□□□□ -1.51
YLR227W-AYLR227W-A NIT2P47016 307 aa5.64□□□□□ -1.51
YLR227W-AYLR227W-A ALY2P47029 1046 aa5.64□□□□□ -1.51
YLR227W-AYLR227W-A NSG2P53898 299 aa5.64□□□□□ -1.51
YLR227W-AYLR227W-A SND1Q04007 877 aa5.64□□□□□ -1.51
YLR227W-AYLR227W-A SLX4Q12098 748 aa5.64□□□□□ -1.51
YLR227W-AYLR227W-A RFC5P38251 354 aa5.63□□□□□ -1.51
YLR227W-AYLR227W-A CCT5P40413 562 aaKnown RBP5.63□□□□□ -1.51
YLR227W-AYLR227W-A MSC2Q03455 724 aa5.63□□□□□ -1.51
YLR227W-AYLR227W-A CDA1Q06702 301 aa5.63□□□□□ -1.51
YLR227W-AYLR227W-A ATP4P05626 244 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A RFA1P22336 621 aaKnown RBP5.62□□□□□ -1.51
YLR227W-AYLR227W-A AIM26P32858 118 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A PTC7P38797 343 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A RPN10P38886 268 aaKnown RBP5.62□□□□□ -1.51
YLR227W-AYLR227W-A GPP2P40106 250 aaKnown RBP5.62□□□□□ -1.51
YLR227W-AYLR227W-A GTS1P40956 396 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A MNN11P46985 422 aaKnown RBP5.62□□□□□ -1.51
YLR227W-AYLR227W-A JSN1P47135 1091 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
YLR227W-AYLR227W-A PEX14P53112 341 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A YNL034WP53963 612 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A YNL018CP53976 612 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A YKR011CQ02209 353 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A YMR187CQ03236 431 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A THI21Q08975 551 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A YLR122CQ12312 125 aa5.62□□□□□ -1.51
YLR227W-AYLR227W-A SPS1P08458 490 aa5.61□□□□□ -1.51
YLR227W-AYLR227W-A FBP1P09201 348 aa5.61□□□□□ -1.51
YLR227W-AYLR227W-A APL1P27351 700 aa5.61□□□□□ -1.51
YLR227W-AYLR227W-A CYS3P31373 394 aaKnown RBP5.61□□□□□ -1.51
YLR227W-AYLR227W-A HSL7P38274 827 aa5.61□□□□□ -1.51
YLR227W-AYLR227W-A SKN7P38889 622 aa5.61□□□□□ -1.51
YLR227W-AYLR227W-A UBC9P50623 157 aaPredicted RBP5.61□□□□□ -1.51
YLR227W-AYLR227W-A RAI1P53063 387 aaKnown RBP5.61□□□□□ -1.51
YLR227W-AYLR227W-A ECM9Q02202 377 aa5.61□□□□□ -1.51
YLR227W-AYLR227W-A YPL034WQ03083 165 aa5.61□□□□□ -1.51
YLR227W-AYLR227W-A SSY1Q03770 852 aa5.61□□□□□ -1.51
YLR227W-AYLR227W-A LPX1Q12405 387 aaKnown RBP5.61□□□□□ -1.51
YLR227W-AYLR227W-A DIF1O13577 133 aa5.6□□□□□ -1.51
YLR227W-AYLR227W-A GCD1P09032 578 aaPredicted RBP5.6□□□□□ -1.51
YLR227W-AYLR227W-A RPD3P32561 433 aa5.6□□□□□ -1.51
YLR227W-AYLR227W-A TFC4P33339 1025 aa5.6□□□□□ -1.51
YLR227W-AYLR227W-A TAT1P38085 619 aa5.6□□□□□ -1.51
YLR227W-AYLR227W-A SET5P38890 526 aaKnown RBP5.6□□□□□ -1.51
YLR227W-AYLR227W-A RET2P43621 546 aa5.6□□□□□ -1.51
YLR227W-AYLR227W-A PHM7Q12252 991 aa5.6□□□□□ -1.51
YLR227W-AYLR227W-A PIF1P07271 859 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A AEP2P22136 580 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A COQ2P32378 372 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A DAL3P32459 195 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A SRP101P32916 621 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A SWE1P32944 819 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A TYE7P33122 291 aaPredicted RBP5.59□□□□□ -1.51
YLR227W-AYLR227W-A HXT6P39003 570 aaKnown RBP5.59□□□□□ -1.51
YLR227W-AYLR227W-A HXT7P39004 570 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A PEA2P40091 420 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A CEP3P40969 608 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A MCA1Q08601 432 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A YPR053CQ6Q5F3 151 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A YLR149CQ99296 730 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A MPD2Q99316 277 aa5.59□□□□□ -1.51
YLR227W-AYLR227W-A HSF1P10961 833 aa5.58□□□□□ -1.52
YLR227W-AYLR227W-A SST2P11972 698 aaKnown RBP5.58□□□□□ -1.52
YLR227W-AYLR227W-A KIN2P13186 1147 aaKnown RBP5.58□□□□□ -1.52
YLR227W-AYLR227W-A CHS2P14180 963 aa5.58□□□□□ -1.52
YLR227W-AYLR227W-A HIR1P32479 840 aa5.58□□□□□ -1.52
YLR227W-AYLR227W-A DID4P36108 232 aa5.58□□□□□ -1.52
YLR227W-AYLR227W-A YKR051WP36142 418 aa5.58□□□□□ -1.52
YLR227W-AYLR227W-A BNA2P47125 453 aa5.58□□□□□ -1.52
YLR227W-AYLR227W-A ENV11P53246 860 aa5.58□□□□□ -1.52
YLR227W-AYLR227W-A SSL1Q04673 461 aaPredicted RBP5.58□□□□□ -1.52
YLR227W-AYLR227W-A YOR022CQ12204 715 aa5.58□□□□□ -1.52
YLR227W-AYLR227W-A RPS9AO13516 197 aaKnown RBP5.57□□□□□ -1.52
YLR227W-AYLR227W-A VPS24P36095 224 aaKnown RBP5.57□□□□□ -1.52
YLR227W-AYLR227W-A DOT6P40059 670 aaKnown RBP5.57□□□□□ -1.52
YLR227W-AYLR227W-A YGR153WP48238 217 aa5.57□□□□□ -1.52
YLR227W-AYLR227W-A ZIP2P53061 704 aa5.57□□□□□ -1.52
YLR227W-AYLR227W-A YGR012WP53206 393 aa5.57□□□□□ -1.52
YLR227W-AYLR227W-A ORC3P54790 616 aa5.57□□□□□ -1.52
YLR227W-AYLR227W-A RSM24Q03976 319 aa5.57□□□□□ -1.52
YLR227W-AYLR227W-A HFI1Q12060 488 aa5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms