RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C LRS4Q04087 347 aaKnown RBP2.84□□□□□ -1.95
UBP11YKR098C YDR338CQ05497 695 aa2.84□□□□□ -1.95
UBP11YKR098C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
UBP11YKR098C OSW2Q12202 724 aa2.84□□□□□ -1.95
UBP11YKR098C YBR182C-AQ8TGU6 64 aa2.84□□□□□ -1.95
UBP11YKR098C URA1P28272 314 aaPredicted RBP2.84□□□□□ -1.96
UBP11YKR098C CCR4P31384 837 aaKnown RBP2.84□□□□□ -1.96
UBP11YKR098C ABZ1P37254 787 aaPredicted RBP2.84□□□□□ -1.96
UBP11YKR098C SLN1P39928 1220 aaPredicted RBP2.84□□□□□ -1.96
UBP11YKR098C RLP7P40693 322 aaKnown RBP2.84□□□□□ -1.96
UBP11YKR098C GZF3P42944 551 aaKnown RBP2.84□□□□□ -1.96
UBP11YKR098C DUG1P43616 481 aaKnown RBP2.84□□□□□ -1.96
UBP11YKR098C TRE1Q08919 783 aa2.84□□□□□ -1.96
UBP11YKR098C YDR215CQ12240 137 aa2.84□□□□□ -1.96
UBP11YKR098C NOT3P06102 836 aaKnown RBP2.83□□□□□ -1.96
UBP11YKR098C RFA1P22336 621 aaKnown RBP2.83□□□□□ -1.96
UBP11YKR098C YCK2P23292 546 aaKnown RBP2.83□□□□□ -1.96
UBP11YKR098C PGM1P33401 570 aaKnown RBP2.83□□□□□ -1.96
UBP11YKR098C RPN10P38886 268 aaKnown RBP2.83□□□□□ -1.96
UBP11YKR098C CEP3P40969 608 aa2.83□□□□□ -1.96
UBP11YKR098C ALY2P47029 1046 aa2.83□□□□□ -1.96
UBP11YKR098C YNL034WP53963 612 aa2.83□□□□□ -1.96
UBP11YKR098C HDA1P53973 706 aa2.83□□□□□ -1.96
UBP11YKR098C YNL018CP53976 612 aa2.83□□□□□ -1.96
UBP11YKR098C ATP4P05626 244 aa2.83□□□□□ -1.96
UBP11YKR098C CYS3P31373 394 aaKnown RBP2.83□□□□□ -1.96
UBP11YKR098C AIM26P32858 118 aa2.83□□□□□ -1.96
UBP11YKR098C SWE1P32944 819 aa2.83□□□□□ -1.96
UBP11YKR098C TFC4P33339 1025 aa2.83□□□□□ -1.96
UBP11YKR098C STE13P33894 931 aa2.83□□□□□ -1.96
UBP11YKR098C RFC5P38251 354 aa2.83□□□□□ -1.96
UBP11YKR098C HSL7P38274 827 aa2.83□□□□□ -1.96
UBP11YKR098C SAF1P38352 637 aa2.83□□□□□ -1.96
UBP11YKR098C PEA2P40091 420 aa2.83□□□□□ -1.96
UBP11YKR098C GPP2P40106 250 aaKnown RBP2.83□□□□□ -1.96
UBP11YKR098C CCT5P40413 562 aaKnown RBP2.83□□□□□ -1.96
UBP11YKR098C NIT2P47016 307 aa2.83□□□□□ -1.96
UBP11YKR098C UBC9P50623 157 aaPredicted RBP2.83□□□□□ -1.96
UBP11YKR098C RIB2Q12362 591 aaKnown RBP2.83□□□□□ -1.96
UBP11YKR098C SPS1P08458 490 aa2.82□□□□□ -1.96
UBP11YKR098C AEP2P22136 580 aa2.82□□□□□ -1.96
UBP11YKR098C HIR1P32479 840 aa2.82□□□□□ -1.96
UBP11YKR098C PTC7P38797 343 aa2.82□□□□□ -1.96
UBP11YKR098C DOT6P40059 670 aaKnown RBP2.82□□□□□ -1.96
UBP11YKR098C RET2P43621 546 aa2.82□□□□□ -1.96
UBP11YKR098C MNN11P46985 422 aaKnown RBP2.82□□□□□ -1.96
UBP11YKR098C DAS1P47005 663 aa2.82□□□□□ -1.96
UBP11YKR098C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
UBP11YKR098C RAI1P53063 387 aaKnown RBP2.82□□□□□ -1.96
UBP11YKR098C ECM9Q02202 377 aa2.82□□□□□ -1.96
UBP11YKR098C YKR011CQ02209 353 aa2.82□□□□□ -1.96
UBP11YKR098C MPD2Q99316 277 aa2.82□□□□□ -1.96
UBP11YKR098C DAL3P32459 195 aa2.81□□□□□ -1.96
UBP11YKR098C GTS1P40956 396 aa2.81□□□□□ -1.96
UBP11YKR098C YGR153WP48238 217 aa2.81□□□□□ -1.96
UBP11YKR098C NSG2P53898 299 aa2.81□□□□□ -1.96
UBP11YKR098C YMR187CQ03236 431 aa2.81□□□□□ -1.96
UBP11YKR098C MSC2Q03455 724 aa2.81□□□□□ -1.96
UBP11YKR098C THI21Q08975 551 aa2.81□□□□□ -1.96
UBP11YKR098C RPS9AO13516 197 aaKnown RBP2.81□□□□□ -1.96
UBP11YKR098C DIF1O13577 133 aa2.81□□□□□ -1.96
UBP11YKR098C SST2P11972 698 aaKnown RBP2.81□□□□□ -1.96
UBP11YKR098C CHS2P14180 963 aa2.81□□□□□ -1.96
UBP11YKR098C MSB1P21339 1137 aaKnown RBP2.81□□□□□ -1.96
UBP11YKR098C PWP2P25635 923 aaKnown RBP2.81□□□□□ -1.96
UBP11YKR098C APL1P27351 700 aa2.81□□□□□ -1.96
UBP11YKR098C RPD3P32561 433 aa2.81□□□□□ -1.96
UBP11YKR098C TYE7P33122 291 aaPredicted RBP2.81□□□□□ -1.96
UBP11YKR098C VPS24P36095 224 aaKnown RBP2.81□□□□□ -1.96
UBP11YKR098C DID4P36108 232 aa2.81□□□□□ -1.96
UBP11YKR098C SAP190P36123 1033 aa2.81□□□□□ -1.96
UBP11YKR098C YKR051WP36142 418 aa2.81□□□□□ -1.96
UBP11YKR098C TAT1P38085 619 aa2.81□□□□□ -1.96
UBP11YKR098C SET5P38890 526 aaKnown RBP2.81□□□□□ -1.96
UBP11YKR098C SHR5P41912 237 aa2.81□□□□□ -1.96
UBP11YKR098C SIZ1Q04195 904 aa2.81□□□□□ -1.96
UBP11YKR098C CDA1Q06702 301 aa2.81□□□□□ -1.96
UBP11YKR098C HAL9Q12180 1030 aa2.81□□□□□ -1.96
UBP11YKR098C YOR022CQ12204 715 aa2.81□□□□□ -1.96
UBP11YKR098C NYV1Q12255 253 aa2.81□□□□□ -1.96
UBP11YKR098C PRC1P00729 532 aa2.8□□□□□ -1.96
UBP11YKR098C SRP101P32916 621 aa2.8□□□□□ -1.96
UBP11YKR098C FUI1P38196 639 aa2.8□□□□□ -1.96
UBP11YKR098C TDA3P38758 523 aa2.8□□□□□ -1.96
UBP11YKR098C HXT6P39003 570 aaKnown RBP2.8□□□□□ -1.96
UBP11YKR098C HXT7P39004 570 aa2.8□□□□□ -1.96
UBP11YKR098C NPY1P53164 384 aa2.8□□□□□ -1.96
UBP11YKR098C SUB1P54000 292 aaKnown RBP2.8□□□□□ -1.96
UBP11YKR098C SSY1Q03770 852 aa2.8□□□□□ -1.96
UBP11YKR098C SSL1Q04673 461 aaPredicted RBP2.8□□□□□ -1.96
UBP11YKR098C CRR1Q05790 422 aa2.8□□□□□ -1.96
UBP11YKR098C MCA1Q08601 432 aa2.8□□□□□ -1.96
UBP11YKR098C RMP1Q12530 201 aa2.8□□□□□ -1.96
UBP11YKR098C Q0142Q9ZZW4 58 aa2.8□□□□□ -1.96
UBP11YKR098C PIF1P07271 859 aa2.8□□□□□ -1.96
UBP11YKR098C GCD1P09032 578 aaPredicted RBP2.8□□□□□ -1.96
UBP11YKR098C KIN2P13186 1147 aaKnown RBP2.8□□□□□ -1.96
UBP11YKR098C HSP78P33416 811 aa2.8□□□□□ -1.96
UBP11YKR098C SKN7P38889 622 aa2.8□□□□□ -1.96
UBP11YKR098C BNA2P47125 453 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms