RNA–Protein interactions for RNA: YKL115C

YKL115C, Transcript of Dubious open reading frame, yeast

Gene YKL115C, Length 393 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL115C	YKL115C	PPG1	P32838	368 aa		4.66	□□□□□ -1.66
YKL115C	YKL115C	AFR1	P33304	620 aa		4.66	□□□□□ -1.66
YKL115C	YKL115C	ATF1	P40353	525 aa		4.66	□□□□□ -1.66
YKL115C	YKL115C	STU2	P46675	888 aa		4.66	□□□□□ -1.66
YKL115C	YKL115C	NCS6	P53088	359 aa		4.66	□□□□□ -1.66
YKL115C	YKL115C	UTP8	P53276	713 aa	Known RBP	4.66	□□□□□ -1.66
YKL115C	YKL115C	TAF8	Q03750	510 aa		4.66	□□□□□ -1.66
YKL115C	YKL115C	TMN2	Q04562	672 aa		4.66	□□□□□ -1.66
YKL115C	YKL115C	ECM21	P38167	1117 aa	Known RBP	4.65	□□□□□ -1.67
YKL115C	YKL115C	BUL1	P48524	976 aa		4.65	□□□□□ -1.67
YKL115C	YKL115C	ERP6	P53198	216 aa		4.65	□□□□□ -1.67
YKL115C	YKL115C	ALG12	P53730	551 aa		4.65	□□□□□ -1.67
YKL115C	YKL115C	WHI4	Q07655	649 aa	Known RBP	4.65	□□□□□ -1.67
YKL115C	YKL115C	MDM38	Q08179	573 aa		4.65	□□□□□ -1.67
YKL115C	YKL115C	MCH5	Q08777	521 aa		4.65	□□□□□ -1.67
YKL115C	YKL115C	AIM44	Q99299	758 aa		4.65	□□□□□ -1.67
YKL115C	YKL115C	AAR2	P32357	355 aa	Predicted RBP	4.64	□□□□□ -1.67
YKL115C	YKL115C	SCT1	P32784	759 aa		4.64	□□□□□ -1.67
YKL115C	YKL115C	SAH1	P39954	449 aa	Known RBP	4.64	□□□□□ -1.67
YKL115C	YKL115C	URM1	P40554	99 aa	Predicted RBP	4.64	□□□□□ -1.67
YKL115C	YKL115C	QRI1	P43123	477 aa	Known RBP	4.64	□□□□□ -1.67
YKL115C	YKL115C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
YKL115C	YKL115C	STB4	P50104	949 aa		4.64	□□□□□ -1.67
YKL115C	YKL115C	YMR206W	Q03695	313 aa		4.64	□□□□□ -1.67
YKL115C	YKL115C	FPR4	Q06205	392 aa	Predicted RBP	4.64	□□□□□ -1.67
YKL115C	YKL115C	YLL058W	Q12198	575 aa		4.64	□□□□□ -1.67
YKL115C	YKL115C	MSD1	P15179	658 aa	Known RBP	4.63	□□□□□ -1.67
YKL115C	YKL115C	ATG19	P35193	415 aa		4.63	□□□□□ -1.67
YKL115C	YKL115C	YRO2	P38079	344 aa		4.63	□□□□□ -1.67
YKL115C	YKL115C	KTR4	P38131	464 aa		4.63	□□□□□ -1.67
YKL115C	YKL115C	LGE1	Q02796	332 aa	Known RBP	4.63	□□□□□ -1.67
YKL115C	YKL115C	SRT1	Q03175	343 aa		4.63	□□□□□ -1.67
YKL115C	YKL115C	GUP2	Q08929	609 aa		4.63	□□□□□ -1.67
YKL115C	YKL115C	ERG4	P25340	473 aa		4.62	□□□□□ -1.67
YKL115C	YKL115C	FUN30	P31380	1131 aa		4.62	□□□□□ -1.67
YKL115C	YKL115C	PPH3	P32345	308 aa		4.62	□□□□□ -1.67
YKL115C	YKL115C	CDC12	P32468	407 aa	Known RBP	4.62	□□□□□ -1.67
YKL115C	YKL115C	GIC1	P38785	314 aa		4.62	□□□□□ -1.67
YKL115C	YKL115C	SFB2	P53953	876 aa		4.62	□□□□□ -1.67
YKL115C	YKL115C	OMS1	Q06668	471 aa		4.62	□□□□□ -1.67
YKL115C	YKL115C	PHO8	P11491	566 aa		4.61	□□□□□ -1.67
YKL115C	YKL115C	GAL11	P19659	1081 aa		4.61	□□□□□ -1.67
YKL115C	YKL115C	PRP9	P19736	530 aa	Known RBP	4.61	□□□□□ -1.67
YKL115C	YKL115C	TOK1	P40310	691 aa		4.6	□□□□□ -1.67
YKL115C	YKL115C	HUL4	P40985	892 aa		4.6	□□□□□ -1.67
YKL115C	YKL115C	MAL11	P53048	616 aa		4.6	□□□□□ -1.67
YKL115C	YKL115C	TIM44	Q01852	431 aa		4.6	□□□□□ -1.67
YKL115C	YKL115C	BUL2	Q03758	920 aa	Known RBP	4.6	□□□□□ -1.67
YKL115C	YKL115C	IRC10	Q08118	586 aa		4.6	□□□□□ -1.67
YKL115C	YKL115C	ACF2	Q12168	779 aa		4.6	□□□□□ -1.67
YKL115C	YKL115C	TOM70	P07213	617 aa	Known RBP	4.59	□□□□□ -1.67
YKL115C	YKL115C	THI4	P32318	326 aa		4.59	□□□□□ -1.67
YKL115C	YKL115C	CUE2	P36075	443 aa	Known RBP	4.59	□□□□□ -1.67
YKL115C	YKL115C	SNM1	P40993	198 aa		4.59	□□□□□ -1.67
YKL115C	YKL115C	YDL124W	Q07551	312 aa	Known RBP	4.59	□□□□□ -1.67
YKL115C	YKL115C	MET6	P05694	767 aa	Known RBP	4.58	□□□□□ -1.68
YKL115C	YKL115C	SPC42	P36094	363 aa		4.58	□□□□□ -1.68
YKL115C	YKL115C	PET10	P36139	283 aa		4.58	□□□□□ -1.68
YKL115C	YKL115C	CHZ1	P40019	153 aa	Predicted RBP	4.58	□□□□□ -1.68
YKL115C	YKL115C	TPO2	P53283	614 aa		4.58	□□□□□ -1.68
YKL115C	YKL115C	RNT1	Q02555	471 aa		4.58	□□□□□ -1.68
YKL115C	YKL115C	TRP4	P07285	380 aa	Predicted RBP	4.57	□□□□□ -1.68
YKL115C	YKL115C	MEF1	P25039	761 aa		4.57	□□□□□ -1.68
YKL115C	YKL115C	BRN1	P38170	754 aa		4.57	□□□□□ -1.68
YKL115C	YKL115C	TSL1	P38427	1098 aa	Known RBP	4.57	□□□□□ -1.68
YKL115C	YKL115C	UBP6	P43593	499 aa	Known RBP	4.57	□□□□□ -1.68
YKL115C	YKL115C	HSV2	P50079	448 aa	Predicted RBP	4.57	□□□□□ -1.68
YKL115C	YKL115C	MUK1	Q02866	612 aa		4.57	□□□□□ -1.68
YKL115C	YKL115C	UPC2	Q12151	913 aa		4.57	□□□□□ -1.68
YKL115C	YKL115C	NMD2	P38798	1089 aa	Known RBP	4.56	□□□□□ -1.68
YKL115C	YKL115C	GGA2	P38817	585 aa	Known RBP	4.56	□□□□□ -1.68
YKL115C	YKL115C	GDH3	P39708	457 aa		4.56	□□□□□ -1.68
YKL115C	YKL115C	GYP8	P43570	497 aa		4.56	□□□□□ -1.68
YKL115C	YKL115C	SRP1	Q02821	542 aa	Known RBP	4.56	□□□□□ -1.68
YKL115C	YKL115C	YLR125W	Q12138	136 aa		4.56	□□□□□ -1.68
YKL115C	YKL115C	ADE8	P04161	214 aa		4.55	□□□□□ -1.68
YKL115C	YKL115C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
YKL115C	YKL115C	SED4	P25365	1065 aa		4.55	□□□□□ -1.68
YKL115C	YKL115C	MTH1	P35198	433 aa		4.55	□□□□□ -1.68
YKL115C	YKL115C	MNN1	P39106	762 aa		4.55	□□□□□ -1.68
YKL115C	YKL115C	SIT1	P39980	628 aa		4.55	□□□□□ -1.68
YKL115C	YKL115C	OSW7	P43611	510 aa		4.55	□□□□□ -1.68
YKL115C	YKL115C	GND2	P53319	492 aa		4.55	□□□□□ -1.68
YKL115C	YKL115C	NTG2	Q08214	380 aa		4.55	□□□□□ -1.68
YKL115C	YKL115C	PPR1	P07272	904 aa	Predicted RBP	4.54	□□□□□ -1.68
YKL115C	YKL115C	ALG7	P07286	448 aa		4.54	□□□□□ -1.68
YKL115C	YKL115C	RRP14	P36080	434 aa	Known RBP	4.54	□□□□□ -1.68
YKL115C	YKL115C	TY4A-J	P47023	414 aa		4.54	□□□□□ -1.68
YKL115C	YKL115C	LCD1	Q04377	747 aa		4.54	□□□□□ -1.68
YKL115C	YKL115C	TRM13	Q12383	476 aa		4.54	□□□□□ -1.68
YKL115C	YKL115C	CDC11	P32458	415 aa		4.53	□□□□□ -1.68
YKL115C	YKL115C	YER158C	P40095	573 aa		4.53	□□□□□ -1.68
YKL115C	YKL115C	YJR142W	P47173	342 aa		4.53	□□□□□ -1.68
YKL115C	YKL115C	GYP7	P48365	746 aa		4.53	□□□□□ -1.68
YKL115C	YKL115C	DNM1	P54861	757 aa		4.53	□□□□□ -1.68
YKL115C	YKL115C	YPR196W	Q06595	470 aa		4.53	□□□□□ -1.68
YKL115C	YKL115C	MSH2	P25847	964 aa		4.52	□□□□□ -1.69
YKL115C	YKL115C	RPC82	P32349	654 aa		4.52	□□□□□ -1.69
YKL115C	YKL115C	RPD3	P32561	433 aa		4.52	□□□□□ -1.69
YKL115C	YKL115C	REC104	P33323	182 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms