RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W TRE1Q08919 783 aa6.7□□□□□ -1.34
SPC42YKL042W PEX7P39108 375 aa6.69□□□□□ -1.34
SPC42YKL042W OYE3P41816 400 aaPredicted RBP6.69□□□□□ -1.34
SPC42YKL042W MTQ2Q03920 221 aaPredicted RBP6.69□□□□□ -1.34
SPC42YKL042W GUD1Q07729 489 aa6.69□□□□□ -1.34
SPC42YKL042W NSI1Q12457 570 aa6.69□□□□□ -1.34
SPC42YKL042W DAL7P21826 554 aa6.68□□□□□ -1.34
SPC42YKL042W RFC5P38251 354 aa6.68□□□□□ -1.34
SPC42YKL042W YAP1801P38856 637 aa6.68□□□□□ -1.34
SPC42YKL042W NUG1P40010 520 aaKnown RBP6.68□□□□□ -1.34
SPC42YKL042W GTS1P40956 396 aa6.68□□□□□ -1.34
SPC42YKL042W GPP1P41277 250 aaKnown RBP6.68□□□□□ -1.34
SPC42YKL042W TAD1P53065 400 aa6.68□□□□□ -1.34
SPC42YKL042W NOG2P53742 486 aaKnown RBP6.68□□□□□ -1.34
SPC42YKL042W XYL2Q07993 356 aa6.68□□□□□ -1.34
SPC42YKL042W SPS1P08458 490 aa6.67□□□□□ -1.34
SPC42YKL042W PRP19P32523 503 aaKnown RBP6.67□□□□□ -1.34
SPC42YKL042W ECM21P38167 1117 aaKnown RBP6.67□□□□□ -1.34
SPC42YKL042W ENP1P38333 483 aaKnown RBP6.67□□□□□ -1.34
SPC42YKL042W PCM1P38628 557 aaKnown RBP6.67□□□□□ -1.34
SPC42YKL042W PTC7P38797 343 aa6.67□□□□□ -1.34
SPC42YKL042W RPN10P38886 268 aaKnown RBP6.67□□□□□ -1.34
SPC42YKL042W TPM2P40414 161 aa6.67□□□□□ -1.34
SPC42YKL042W NIT1P40447 199 aa6.67□□□□□ -1.34
SPC42YKL042W ALY2P47029 1046 aa6.67□□□□□ -1.34
SPC42YKL042W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
SPC42YKL042W YJR096WP47137 282 aa6.67□□□□□ -1.34
SPC42YKL042W ATG33Q06485 197 aa6.67□□□□□ -1.34
SPC42YKL042W URA1P28272 314 aaPredicted RBP6.66□□□□□ -1.34
SPC42YKL042W AIM14P53109 570 aa6.66□□□□□ -1.34
SPC42YKL042W PEX8P53248 589 aa6.66□□□□□ -1.34
SPC42YKL042W TRE2Q08693 809 aa6.66□□□□□ -1.34
SPC42YKL042W GUP2Q08929 609 aa6.66□□□□□ -1.34
SPC42YKL042W GIN4Q12263 1142 aa6.66□□□□□ -1.34
SPC42YKL042W RPS9AO13516 197 aaKnown RBP6.65□□□□□ -1.34
SPC42YKL042W NOT3P06102 836 aaKnown RBP6.65□□□□□ -1.34
SPC42YKL042W HMG1P12683 1054 aa6.65□□□□□ -1.34
SPC42YKL042W EUG1P32474 517 aa6.65□□□□□ -1.34
SPC42YKL042W YBR071WP38243 211 aa6.65□□□□□ -1.34
SPC42YKL042W CKB2P38930 258 aa6.65□□□□□ -1.34
SPC42YKL042W DOT6P40059 670 aaKnown RBP6.65□□□□□ -1.34
SPC42YKL042W LRS4Q04087 347 aaKnown RBP6.65□□□□□ -1.34
SPC42YKL042W NHX1Q04121 633 aa6.65□□□□□ -1.34
SPC42YKL042W KIN2P13186 1147 aaKnown RBP6.64□□□□□ -1.35
SPC42YKL042W APL1P27351 700 aa6.64□□□□□ -1.35
SPC42YKL042W RLP7P40693 322 aaKnown RBP6.64□□□□□ -1.35
SPC42YKL042W CEP3P40969 608 aa6.64□□□□□ -1.35
SPC42YKL042W COG6P53959 839 aa6.64□□□□□ -1.35
SPC42YKL042W VPS30Q02948 557 aa6.64□□□□□ -1.35
SPC42YKL042W RNQ1P25367 405 aa6.63□□□□□ -1.35
SPC42YKL042W YCL002CP25565 263 aa6.63□□□□□ -1.35
SPC42YKL042W CYS3P31373 394 aaKnown RBP6.63□□□□□ -1.35
SPC42YKL042W SAP190P36123 1033 aa6.63□□□□□ -1.35
SPC42YKL042W UBP5P39944 805 aa6.63□□□□□ -1.35
SPC42YKL042W HXT16P47185 567 aa6.63□□□□□ -1.35
SPC42YKL042W SSY1Q03770 852 aa6.63□□□□□ -1.35
SPC42YKL042W YTM1Q12024 460 aaPredicted RBP6.63□□□□□ -1.35
SPC42YKL042W DIF1O13577 133 aa6.62□□□□□ -1.35
SPC42YKL042W SEC6P32844 805 aa6.62□□□□□ -1.35
SPC42YKL042W SRP101P32916 621 aa6.62□□□□□ -1.35
SPC42YKL042W STE13P33894 931 aa6.62□□□□□ -1.35
SPC42YKL042W SHR5P41912 237 aa6.62□□□□□ -1.35
SPC42YKL042W RAI1P53063 387 aaKnown RBP6.62□□□□□ -1.35
SPC42YKL042W PEX14P53112 341 aa6.62□□□□□ -1.35
SPC42YKL042W HDA1P53973 706 aa6.62□□□□□ -1.35
SPC42YKL042W RSM24Q03976 319 aa6.62□□□□□ -1.35
SPC42YKL042W TMA7Q3E764 64 aaKnown RBP6.62□□□□□ -1.35
SPC42YKL042W YBR182C-AQ8TGU6 64 aa6.62□□□□□ -1.35
SPC42YKL042W ADP1P25371 1049 aa6.61□□□□□ -1.35
SPC42YKL042W HSL7P38274 827 aa6.61□□□□□ -1.35
SPC42YKL042W OAF1P39720 1047 aaPredicted RBP6.61□□□□□ -1.35
SPC42YKL042W YKR011CQ02209 353 aa6.61□□□□□ -1.35
SPC42YKL042W RIB2Q12362 591 aaKnown RBP6.61□□□□□ -1.35
SPC42YKL042W PRC1P00729 532 aa6.6□□□□□ -1.35
SPC42YKL042W GCD1P09032 578 aaPredicted RBP6.6□□□□□ -1.35
SPC42YKL042W TYE7P33122 291 aaPredicted RBP6.6□□□□□ -1.35
SPC42YKL042W LRG1P35688 1017 aa6.6□□□□□ -1.35
SPC42YKL042W ABZ1P37254 787 aaPredicted RBP6.6□□□□□ -1.35
SPC42YKL042W SET5P38890 526 aaKnown RBP6.6□□□□□ -1.35
SPC42YKL042W GZF3P42944 551 aaKnown RBP6.6□□□□□ -1.35
SPC42YKL042W PUS2P53167 370 aa6.6□□□□□ -1.35
SPC42YKL042W MSC2Q03455 724 aa6.6□□□□□ -1.35
SPC42YKL042W HSF1P10961 833 aa6.59□□□□□ -1.35
SPC42YKL042W MIH1P23748 554 aa6.59□□□□□ -1.35
SPC42YKL042W SEG2P34250 1132 aa6.59□□□□□ -1.35
SPC42YKL042W YGR153WP48238 217 aa6.59□□□□□ -1.35
SPC42YKL042W UBC9P50623 157 aaPredicted RBP6.59□□□□□ -1.35
SPC42YKL042W FOL2P51601 243 aaKnown RBP6.59□□□□□ -1.35
SPC42YKL042W NPY1P53164 384 aa6.59□□□□□ -1.35
SPC42YKL042W SND1Q04007 877 aa6.59□□□□□ -1.35
SPC42YKL042W SIZ1Q04195 904 aa6.59□□□□□ -1.35
SPC42YKL042W YDR338CQ05497 695 aa6.59□□□□□ -1.35
SPC42YKL042W CRR1Q05790 422 aa6.59□□□□□ -1.35
SPC42YKL042W SLX4Q12098 748 aa6.59□□□□□ -1.35
SPC42YKL042W ENA1P13587 1091 aa6.58□□□□□ -1.36
SPC42YKL042W CCR4P31384 837 aaKnown RBP6.58□□□□□ -1.36
SPC42YKL042W RPD3P32561 433 aa6.58□□□□□ -1.36
SPC42YKL042W TDA3P38758 523 aa6.58□□□□□ -1.36
SPC42YKL042W DUG1P43616 481 aaKnown RBP6.58□□□□□ -1.36
SPC42YKL042W RET2P43621 546 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms