RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W ERT1P38140 529 aa3.88□□□□□ -1.79
HIT1YJR055W CTF8P38877 133 aa3.88□□□□□ -1.79
HIT1YJR055W YIL108WP40483 696 aaKnown RBP3.88□□□□□ -1.79
HIT1YJR055W VPS30Q02948 557 aa3.88□□□□□ -1.79
HIT1YJR055W BUL2Q03758 920 aaKnown RBP3.88□□□□□ -1.79
HIT1YJR055W TUB3P09734 445 aaKnown RBP3.87□□□□□ -1.79
HIT1YJR055W NAP1P25293 417 aaKnown RBP3.87□□□□□ -1.79
HIT1YJR055W MRP8P35719 219 aa3.87□□□□□ -1.79
HIT1YJR055W SPC42P36094 363 aa3.87□□□□□ -1.79
HIT1YJR055W PPS1P38148 807 aa3.87□□□□□ -1.79
HIT1YJR055W PBY1P38254 753 aa3.87□□□□□ -1.79
HIT1YJR055W FRE5Q08908 694 aa3.87□□□□□ -1.79
HIT1YJR055W SDS3P40505 327 aa3.86□□□□□ -1.79
HIT1YJR055W HDA1P53973 706 aa3.86□□□□□ -1.79
HIT1YJR055W LGE1Q02796 332 aaKnown RBP3.86□□□□□ -1.79
HIT1YJR055W JIP5Q06214 492 aaPredicted RBP3.86□□□□□ -1.79
HIT1YJR055W BDF2Q07442 638 aa3.86□□□□□ -1.79
HIT1YJR055W TRM11Q12463 433 aa3.86□□□□□ -1.79
HIT1YJR055W MET3P08536 511 aa3.85□□□□□ -1.79
HIT1YJR055W RFA1P22336 621 aaKnown RBP3.85□□□□□ -1.79
HIT1YJR055W HBS1P32769 611 aaKnown RBP3.85□□□□□ -1.79
HIT1YJR055W TYE7P33122 291 aaPredicted RBP3.85□□□□□ -1.79
HIT1YJR055W CUE2P36075 443 aaKnown RBP3.85□□□□□ -1.79
HIT1YJR055W TOK1P40310 691 aa3.85□□□□□ -1.79
HIT1YJR055W ELO3P40319 345 aa3.85□□□□□ -1.79
HIT1YJR055W CEP3P40969 608 aa3.85□□□□□ -1.79
HIT1YJR055W CCM1P48237 864 aaPredicted RBP3.85□□□□□ -1.79
HIT1YJR055W YKR011CQ02209 353 aa3.85□□□□□ -1.79
HIT1YJR055W DLT1Q04216 342 aa3.85□□□□□ -1.79
HIT1YJR055W HBT1Q07653 1046 aaKnown RBP3.85□□□□□ -1.79
HIT1YJR055W SWM1Q12379 170 aa3.85□□□□□ -1.79
HIT1YJR055W STE5P32917 917 aa3.84□□□□□ -1.79
HIT1YJR055W IRR1P40541 1150 aa3.84□□□□□ -1.79
HIT1YJR055W TPO2P53283 614 aa3.84□□□□□ -1.79
HIT1YJR055W SVF1Q05515 481 aa3.84□□□□□ -1.79
HIT1YJR055W ADY4Q05955 493 aa3.84□□□□□ -1.79
HIT1YJR055W PRP4P20053 465 aaKnown RBP3.83□□□□□ -1.8
HIT1YJR055W URA1P28272 314 aaPredicted RBP3.83□□□□□ -1.8
HIT1YJR055W YHL017WP38745 532 aa3.83□□□□□ -1.8
HIT1YJR055W RPP1P38786 293 aa3.83□□□□□ -1.8
HIT1YJR055W YHR078WP38799 552 aa3.83□□□□□ -1.8
HIT1YJR055W SPF1P39986 1215 aaKnown RBP3.83□□□□□ -1.8
HIT1YJR055W FKH2P41813 862 aa3.83□□□□□ -1.8
HIT1YJR055W MRPS35P53292 345 aa3.83□□□□□ -1.8
HIT1YJR055W LCD1Q04377 747 aa3.83□□□□□ -1.8
HIT1YJR055W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
HIT1YJR055W CAF20P12962 161 aaKnown RBP3.82□□□□□ -1.8
HIT1YJR055W REC104P33323 182 aa3.82□□□□□ -1.8
HIT1YJR055W PFD1P46988 109 aa3.82□□□□□ -1.8
HIT1YJR055W DAS1P47005 663 aa3.82□□□□□ -1.8
HIT1YJR055W MUP1P50276 574 aa3.82□□□□□ -1.8
HIT1YJR055W MRH1Q12117 320 aaPredicted RBP3.82□□□□□ -1.8
HIT1YJR055W PRP9P19736 530 aaKnown RBP3.81□□□□□ -1.8
HIT1YJR055W VAC8P39968 578 aa3.81□□□□□ -1.8
HIT1YJR055W YBR053CP38235 358 aa3.8□□□□□ -1.8
HIT1YJR055W YBR184WP38299 523 aa3.8□□□□□ -1.8
HIT1YJR055W VHR1P40522 640 aa3.8□□□□□ -1.8
HIT1YJR055W ASI2P53895 289 aa3.8□□□□□ -1.8
HIT1YJR055W ALD6P54115 500 aaKnown RBP3.8□□□□□ -1.8
HIT1YJR055W TDA5Q06417 326 aaKnown RBP3.8□□□□□ -1.8
HIT1YJR055W SUT2Q12286 268 aa3.8□□□□□ -1.8
HIT1YJR055W YPR071WQ12346 211 aa3.8□□□□□ -1.8
HIT1YJR055W RPS9AO13516 197 aaKnown RBP3.79□□□□□ -1.8
HIT1YJR055W YBR284WP38150 797 aa3.79□□□□□ -1.8
HIT1YJR055W YJL163CP46996 555 aa3.79□□□□□ -1.8
HIT1YJR055W NDJ1Q12366 352 aa3.79□□□□□ -1.8
HIT1YJR055W MPH2P0CD99 609 aa3.78□□□□□ -1.8
HIT1YJR055W ALR2P43553 858 aa3.78□□□□□ -1.8
HIT1YJR055W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
HIT1YJR055W PUS2P53167 370 aa3.78□□□□□ -1.8
HIT1YJR055W FMP25Q08023 583 aa3.78□□□□□ -1.8
HIT1YJR055W ENV7Q12003 364 aa3.78□□□□□ -1.8
HIT1YJR055W PEX2P32800 271 aa3.77□□□□□ -1.81
HIT1YJR055W TDP1P38319 544 aa3.77□□□□□ -1.81
HIT1YJR055W AMA1P50082 593 aa3.77□□□□□ -1.81
HIT1YJR055W UTP8P53276 713 aaKnown RBP3.77□□□□□ -1.81
HIT1YJR055W DUS1P53759 423 aaKnown RBP3.77□□□□□ -1.81
HIT1YJR055W PKH1Q03407 766 aa3.77□□□□□ -1.81
HIT1YJR055W CRR1Q05790 422 aa3.77□□□□□ -1.81
HIT1YJR055W HAL9Q12180 1030 aa3.77□□□□□ -1.81
HIT1YJR055W MSD1P15179 658 aaKnown RBP3.76□□□□□ -1.81
HIT1YJR055W CYS3P31373 394 aaKnown RBP3.76□□□□□ -1.81
HIT1YJR055W CDC11P32458 415 aa3.76□□□□□ -1.81
HIT1YJR055W PET10P36139 283 aa3.76□□□□□ -1.81
HIT1YJR055W PCL5P38794 229 aa3.76□□□□□ -1.81
HIT1YJR055W GGA2P38817 585 aaKnown RBP3.76□□□□□ -1.81
HIT1YJR055W SNM1P40993 198 aa3.76□□□□□ -1.81
HIT1YJR055W MUS81Q04149 632 aaPredicted RBP3.76□□□□□ -1.81
HIT1YJR055W BNR1P40450 1375 aa3.76□□□□□ -1.81
HIT1YJR055W GFA1P14742 717 aaKnown RBP3.75□□□□□ -1.81
HIT1YJR055W PZF1P39933 429 aa3.75□□□□□ -1.81
HIT1YJR055W TAH11P47112 604 aa3.75□□□□□ -1.81
HIT1YJR055W VPS73P53142 486 aaKnown RBP3.75□□□□□ -1.81
HIT1YJR055W UBX5Q06682 500 aa3.75□□□□□ -1.81
HIT1YJR055W IRC13Q08630 104 aa3.75□□□□□ -1.81
HIT1YJR055W HBN1Q96VH4 193 aa3.75□□□□□ -1.81
HIT1YJR055W RPL8BP29453 256 aaKnown RBP3.74□□□□□ -1.81
HIT1YJR055W PPZ2P33329 710 aa3.74□□□□□ -1.81
HIT1YJR055W SAK1P38990 1142 aa3.74□□□□□ -1.81
HIT1YJR055W YIR042CP40586 236 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms