RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C ADE16P54113 591 aaKnown RBP6.06□□□□□ -1.44
SFB3YHR098C TGL2P54857 326 aa6.06□□□□□ -1.44
SFB3YHR098C YML119WQ03208 357 aa6.06□□□□□ -1.44
SFB3YHR098C PPM1Q04081 328 aa6.06□□□□□ -1.44
SFB3YHR098C HFD1Q04458 532 aa6.06□□□□□ -1.44
SFB3YHR098C YOR378WQ08902 515 aa6.06□□□□□ -1.44
SFB3YHR098C CWC2Q12046 339 aaPredicted RBP6.06□□□□□ -1.44
SFB3YHR098C CLF1Q12309 687 aaPredicted RBP6.06□□□□□ -1.44
SFB3YHR098C PPR1P07272 904 aaPredicted RBP6.05□□□□□ -1.44
SFB3YHR098C ADY2P25613 283 aa6.05□□□□□ -1.44
SFB3YHR098C YAP5P40574 245 aa6.05□□□□□ -1.44
SFB3YHR098C YIR042CP40586 236 aa6.05□□□□□ -1.44
SFB3YHR098C YJR039WP47107 1121 aa6.05□□□□□ -1.44
SFB3YHR098C URB2P47108 1174 aa6.05□□□□□ -1.44
SFB3YHR098C BTN2P53286 410 aa6.05□□□□□ -1.44
SFB3YHR098C SPO71Q03868 1245 aa6.05□□□□□ -1.44
SFB3YHR098C TMA64Q04600 565 aaKnown RBP6.05□□□□□ -1.44
SFB3YHR098C NSE1Q07913 336 aa6.05□□□□□ -1.44
SFB3YHR098C SGT2Q12118 346 aaKnown RBP6.05□□□□□ -1.44
SFB3YHR098C NCA2Q12374 616 aa6.05□□□□□ -1.44
SFB3YHR098C SSK22P25390 1331 aaPredicted RBP6.05□□□□□ -1.44
SFB3YHR098C MST1P07236 462 aa6.05□□□□□ -1.44
SFB3YHR098C VPS1P21576 704 aaKnown RBP6.05□□□□□ -1.44
SFB3YHR098C MRE11P32829 692 aa6.05□□□□□ -1.44
SFB3YHR098C GRS1P38088 690 aaKnown RBP6.05□□□□□ -1.44
SFB3YHR098C RPN10P38886 268 aaKnown RBP6.05□□□□□ -1.44
SFB3YHR098C FAF1P40546 346 aaPredicted RBP6.05□□□□□ -1.44
SFB3YHR098C SET2P46995 733 aaKnown RBP6.05□□□□□ -1.44
SFB3YHR098C MDR1P53258 950 aa6.05□□□□□ -1.44
SFB3YHR098C YLH47Q06493 454 aa6.05□□□□□ -1.44
SFB3YHR098C SPN1Q06505 410 aaPredicted RBP6.05□□□□□ -1.44
SFB3YHR098C UTP4Q06679 776 aaKnown RBP6.05□□□□□ -1.44
SFB3YHR098C MEU1Q07938 337 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SFB3YHR098C VPS5Q92331 675 aa6.05□□□□□ -1.44
SFB3YHR098C RPL24AP04449 155 aaKnown RBP6.04□□□□□ -1.44
SFB3YHR098C RPB2P08518 1224 aaKnown RBP6.04□□□□□ -1.44
SFB3YHR098C CDC6P09119 513 aa6.04□□□□□ -1.44
SFB3YHR098C PET122P10355 254 aa6.04□□□□□ -1.44
SFB3YHR098C SIT4P20604 311 aa6.04□□□□□ -1.44
SFB3YHR098C ADE2P21264 571 aaKnown RBP6.04□□□□□ -1.44
SFB3YHR098C YKL091CP33324 310 aaKnown RBP6.04□□□□□ -1.44
SFB3YHR098C SHC1P39000 512 aa6.04□□□□□ -1.44
SFB3YHR098C AIP1P46680 615 aaKnown RBP6.04□□□□□ -1.44
SFB3YHR098C RSM24Q03976 319 aa6.04□□□□□ -1.44
SFB3YHR098C VAM6Q07468 1049 aa6.04□□□□□ -1.44
SFB3YHR098C NOP12Q08208 459 aaKnown RBP6.04□□□□□ -1.44
SFB3YHR098C IES3Q12345 250 aa6.04□□□□□ -1.44
SFB3YHR098C SNA3P14359 133 aa6.04□□□□□ -1.44
SFB3YHR098C ILV6P25605 309 aaKnown RBP6.04□□□□□ -1.44
SFB3YHR098C SLA2P33338 968 aa6.04□□□□□ -1.44
SFB3YHR098C GRX7P38068 203 aa6.04□□□□□ -1.44
SFB3YHR098C KIC1P38692 1080 aa6.04□□□□□ -1.44
SFB3YHR098C OSH3P38713 996 aaKnown RBP6.04□□□□□ -1.44
SFB3YHR098C MNN1P39106 762 aa6.04□□□□□ -1.44
SFB3YHR098C SMX2P40204 77 aaKnown RBP6.04□□□□□ -1.44
SFB3YHR098C PNP1Q05788 311 aa6.04□□□□□ -1.44
SFB3YHR098C PSR2Q07949 397 aa6.04□□□□□ -1.44
SFB3YHR098C SLX4Q12098 748 aa6.04□□□□□ -1.44
SFB3YHR098C MSH5Q12175 901 aa6.04□□□□□ -1.44
SFB3YHR098C ADH4P10127 382 aa6.03□□□□□ -1.44
SFB3YHR098C PFK2P16862 959 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
SFB3YHR098C SRV2P17555 526 aaKnown RBP6.03□□□□□ -1.44
SFB3YHR098C PIM1P36775 1133 aa6.03□□□□□ -1.44
SFB3YHR098C ETP1P38748 585 aaKnown RBP6.03□□□□□ -1.44
SFB3YHR098C PRP43P53131 767 aaKnown RBP6.03□□□□□ -1.44
SFB3YHR098C SQS1P53866 767 aaKnown RBP6.03□□□□□ -1.44
SFB3YHR098C YNL040WP53960 456 aaPredicted RBP6.03□□□□□ -1.44
SFB3YHR098C YOL075CQ08234 1294 aa6.03□□□□□ -1.44
SFB3YHR098C HAA1Q12753 694 aaKnown RBP6.03□□□□□ -1.44
SFB3YHR098C HXT1P32465 570 aa6.03□□□□□ -1.44
SFB3YHR098C SPT16P32558 1035 aaKnown RBP6.03□□□□□ -1.44
SFB3YHR098C MCD4P36051 919 aa6.03□□□□□ -1.44
SFB3YHR098C EMP47P43555 445 aa6.03□□□□□ -1.44
SFB3YHR098C SDA1P53313 767 aaKnown RBP6.03□□□□□ -1.44
SFB3YHR098C YPQ2Q06328 317 aa6.03□□□□□ -1.44
SFB3YHR098C OPY2Q06810 360 aa6.03□□□□□ -1.44
SFB3YHR098C FAS2P19097 1887 aaKnown RBP6.03□□□□□ -1.44
SFB3YHR098C THS1P04801 734 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C PHO4P07270 312 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C GAL2P13181 574 aa6.02□□□□□ -1.45
SFB3YHR098C PRP9P19736 530 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C SPS22P25380 463 aa6.02□□□□□ -1.45
SFB3YHR098C SET5P38890 526 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C PET100P38958 111 aa6.02□□□□□ -1.45
SFB3YHR098C ARB1P40024 610 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C PDS1P40316 373 aaPredicted RBP6.02□□□□□ -1.45
SFB3YHR098C SAP185P40856 1058 aa6.02□□□□□ -1.45
SFB3YHR098C GPD2P41911 440 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C CCM1P48237 864 aaPredicted RBP6.02□□□□□ -1.45
SFB3YHR098C IMD4P50094 524 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C ROM1P53046 1155 aa6.02□□□□□ -1.45
SFB3YHR098C KAR5Q04746 504 aa6.02□□□□□ -1.45
SFB3YHR098C SIL1Q08199 421 aa6.02□□□□□ -1.45
SFB3YHR098C SNU66Q12420 587 aaPredicted RBP6.02□□□□□ -1.45
SFB3YHR098C THR4P16120 514 aaKnown RBP6.02□□□□□ -1.45
SFB3YHR098C CBP3P21560 335 aa6.02□□□□□ -1.45
SFB3YHR098C DPB2P24482 689 aaPredicted RBP6.02□□□□□ -1.45
SFB3YHR098C KIP1P28742 1111 aa6.02□□□□□ -1.45
SFB3YHR098C VPH2P32341 215 aa6.02□□□□□ -1.45
SFB3YHR098C ESF2P53743 316 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms