RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A YOL073CQ08232 322 aa4.99□□□□□ -1.61
EFG1YGR271C-A TUB3P09734 445 aaKnown RBP4.98□□□□□ -1.61
EFG1YGR271C-A ERG4P25340 473 aa4.98□□□□□ -1.61
EFG1YGR271C-A OMS1Q06668 471 aa4.98□□□□□ -1.61
EFG1YGR271C-A URA1P28272 314 aaPredicted RBP4.97□□□□□ -1.61
EFG1YGR271C-A PET10P36139 283 aa4.97□□□□□ -1.61
EFG1YGR271C-A YKR011CQ02209 353 aa4.97□□□□□ -1.61
EFG1YGR271C-A NAN1Q02931 896 aaKnown RBP4.97□□□□□ -1.61
EFG1YGR271C-A VPS30Q02948 557 aa4.97□□□□□ -1.61
EFG1YGR271C-A CAD1P24813 409 aaKnown RBP4.96□□□□□ -1.62
EFG1YGR271C-A RPD3P32561 433 aa4.96□□□□□ -1.62
EFG1YGR271C-A TYE7P33122 291 aaPredicted RBP4.96□□□□□ -1.62
EFG1YGR271C-A REC104P33323 182 aa4.96□□□□□ -1.62
EFG1YGR271C-A CTF13P35203 478 aa4.96□□□□□ -1.62
EFG1YGR271C-A NPL3Q01560 414 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
EFG1YGR271C-A TRM13Q12383 476 aa4.96□□□□□ -1.62
EFG1YGR271C-A RPL8BP29453 256 aaKnown RBP4.95□□□□□ -1.62
EFG1YGR271C-A CDC11P32458 415 aa4.95□□□□□ -1.62
EFG1YGR271C-A YPT53P36019 220 aa4.95□□□□□ -1.62
EFG1YGR271C-A ALR2P43553 858 aa4.95□□□□□ -1.62
EFG1YGR271C-A RNT1Q02555 471 aa4.95□□□□□ -1.62
EFG1YGR271C-A ENV7Q12003 364 aa4.95□□□□□ -1.62
EFG1YGR271C-A TRM11Q12463 433 aa4.95□□□□□ -1.62
EFG1YGR271C-A HBN1Q96VH4 193 aa4.95□□□□□ -1.62
EFG1YGR271C-A PPR1P07272 904 aaPredicted RBP4.94□□□□□ -1.62
EFG1YGR271C-A GRX1P25373 110 aaKnown RBP4.94□□□□□ -1.62
EFG1YGR271C-A YIL108WP40483 696 aaKnown RBP4.94□□□□□ -1.62
EFG1YGR271C-A ERP6P53198 216 aa4.94□□□□□ -1.62
EFG1YGR271C-A PEX19Q07418 342 aa4.94□□□□□ -1.62
EFG1YGR271C-A MSD1P15179 658 aaKnown RBP4.93□□□□□ -1.62
EFG1YGR271C-A PRP4P20053 465 aaKnown RBP4.93□□□□□ -1.62
EFG1YGR271C-A RFA1P22336 621 aaKnown RBP4.93□□□□□ -1.62
EFG1YGR271C-A SUL1P38359 859 aa4.93□□□□□ -1.62
EFG1YGR271C-A JSN1P47135 1091 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
EFG1YGR271C-A YPR071WQ12346 211 aa4.93□□□□□ -1.62
EFG1YGR271C-A MPH2P0CD99 609 aa4.92□□□□□ -1.62
EFG1YGR271C-A QRI1P43123 477 aaKnown RBP4.92□□□□□ -1.62
EFG1YGR271C-A TMN2Q04562 672 aa4.92□□□□□ -1.62
EFG1YGR271C-A SPO75Q07798 868 aa4.92□□□□□ -1.62
EFG1YGR271C-A YBR284WP38150 797 aa4.91□□□□□ -1.62
EFG1YGR271C-A YHR078WP38799 552 aa4.91□□□□□ -1.62
EFG1YGR271C-A ASI2P53895 289 aa4.91□□□□□ -1.62
EFG1YGR271C-A UBX5Q06682 500 aa4.91□□□□□ -1.62
EFG1YGR271C-A MCH5Q08777 521 aa4.91□□□□□ -1.62
EFG1YGR271C-A WRS1Q12109 432 aaKnown RBP4.91□□□□□ -1.62
EFG1YGR271C-A ALG7P07286 448 aa4.9□□□□□ -1.63
EFG1YGR271C-A UBP6P43593 499 aaKnown RBP4.9□□□□□ -1.63
EFG1YGR271C-A UBA2P52488 636 aa4.9□□□□□ -1.63
EFG1YGR271C-A EAF1Q06337 982 aa4.9□□□□□ -1.63
EFG1YGR271C-A SWM1Q12379 170 aa4.9□□□□□ -1.63
EFG1YGR271C-A TOP3P13099 656 aa4.89□□□□□ -1.63
EFG1YGR271C-A EMC3P36039 253 aa4.89□□□□□ -1.63
EFG1YGR271C-A YHR020WP38708 688 aaKnown RBP4.89□□□□□ -1.63
EFG1YGR271C-A CEP3P40969 608 aa4.89□□□□□ -1.63
EFG1YGR271C-A YJL049WP47048 450 aa4.89□□□□□ -1.63
EFG1YGR271C-A NOG2P53742 486 aaKnown RBP4.89□□□□□ -1.63
EFG1YGR271C-A DUS1P53759 423 aaKnown RBP4.89□□□□□ -1.63
EFG1YGR271C-A TAF8Q03750 510 aa4.89□□□□□ -1.63
EFG1YGR271C-A ACF2Q12168 779 aa4.89□□□□□ -1.63
EFG1YGR271C-A CIT1P00890 479 aa4.88□□□□□ -1.63
EFG1YGR271C-A MET3P08536 511 aa4.88□□□□□ -1.63
EFG1YGR271C-A RAD4P14736 754 aa4.88□□□□□ -1.63
EFG1YGR271C-A ELO3P40319 345 aa4.88□□□□□ -1.63
EFG1YGR271C-A STB4P50104 949 aa4.88□□□□□ -1.63
EFG1YGR271C-A MRPS35P53292 345 aa4.88□□□□□ -1.63
EFG1YGR271C-A ADY4Q05955 493 aa4.88□□□□□ -1.63
EFG1YGR271C-A FRE5Q08908 694 aa4.88□□□□□ -1.63
EFG1YGR271C-A HAL9Q12180 1030 aa4.88□□□□□ -1.63
EFG1YGR271C-A RPS9AO13516 197 aaKnown RBP4.87□□□□□ -1.63
EFG1YGR271C-A HSP60P19882 572 aaKnown RBP4.87□□□□□ -1.63
EFG1YGR271C-A YBR053CP38235 358 aa4.87□□□□□ -1.63
EFG1YGR271C-A RPP1P38786 293 aa4.87□□□□□ -1.63
EFG1YGR271C-A YGR283CP53336 341 aaPredicted RBP4.87□□□□□ -1.63
EFG1YGR271C-A MUK1Q02866 612 aa4.87□□□□□ -1.63
EFG1YGR271C-A DLT1Q04216 342 aa4.87□□□□□ -1.63
EFG1YGR271C-A THI21Q08975 551 aa4.87□□□□□ -1.63
EFG1YGR271C-A OSH2Q12451 1283 aa4.87□□□□□ -1.63
EFG1YGR271C-A GYP8P43570 497 aa4.86□□□□□ -1.63
EFG1YGR271C-A TIM44Q01852 431 aa4.86□□□□□ -1.63
EFG1YGR271C-A IRC10Q08118 586 aa4.86□□□□□ -1.63
EFG1YGR271C-A GPR1Q12361 961 aa4.86□□□□□ -1.63
EFG1YGR271C-A ARE1P25628 610 aa4.85□□□□□ -1.63
EFG1YGR271C-A CYS3P31373 394 aaKnown RBP4.85□□□□□ -1.63
EFG1YGR271C-A SIC1P38634 284 aa4.85□□□□□ -1.63
EFG1YGR271C-A NIT3P49954 291 aa4.85□□□□□ -1.63
EFG1YGR271C-A MUS81Q04149 632 aaPredicted RBP4.85□□□□□ -1.63
EFG1YGR271C-A MTH1P35198 433 aa4.84□□□□□ -1.63
EFG1YGR271C-A SDS3P40505 327 aa4.84□□□□□ -1.63
EFG1YGR271C-A VHR1P40522 640 aa4.84□□□□□ -1.63
EFG1YGR271C-A FKH2P41813 862 aa4.84□□□□□ -1.63
EFG1YGR271C-A STU2P46675 888 aa4.84□□□□□ -1.63
EFG1YGR271C-A MUP1P50276 574 aa4.84□□□□□ -1.63
EFG1YGR271C-A PUS2P53167 370 aa4.84□□□□□ -1.63
EFG1YGR271C-A CAF20P12962 161 aaKnown RBP4.83□□□□□ -1.64
EFG1YGR271C-A BET3P36149 193 aa4.83□□□□□ -1.64
EFG1YGR271C-A PPS1P38148 807 aa4.83□□□□□ -1.64
EFG1YGR271C-A YHL017WP38745 532 aa4.83□□□□□ -1.64
EFG1YGR271C-A GGA2P38817 585 aaKnown RBP4.83□□□□□ -1.64
EFG1YGR271C-A DAS1P47005 663 aa4.83□□□□□ -1.64
EFG1YGR271C-A TIM54P47045 478 aa4.83□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms