RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	CIT2	P08679	460 aa		5.04	□□□□□ -1.6
LSM4	YER112W	PHO8	P11491	566 aa		5.04	□□□□□ -1.6
LSM4	YER112W	MSD1	P15179	658 aa	Known RBP	5.04	□□□□□ -1.6
LSM4	YER112W	PPG1	P32838	368 aa		5.04	□□□□□ -1.6
LSM4	YER112W	TIM23	P32897	222 aa		5.04	□□□□□ -1.6
LSM4	YER112W	REC104	P33323	182 aa		5.04	□□□□□ -1.6
LSM4	YER112W	TSL1	P38427	1098 aa	Known RBP	5.04	□□□□□ -1.6
LSM4	YER112W	UBP6	P43593	499 aa	Known RBP	5.04	□□□□□ -1.6
LSM4	YER112W	CHA4	P43634	648 aa		5.04	□□□□□ -1.6
LSM4	YER112W	EXG2	P52911	562 aa		5.04	□□□□□ -1.6
LSM4	YER112W	YPR071W	Q12346	211 aa		5.04	□□□□□ -1.6
LSM4	YER112W	NPP1	P25353	742 aa		5.03	□□□□□ -1.6
LSM4	YER112W	AFR1	P33304	620 aa		5.03	□□□□□ -1.6
LSM4	YER112W	RRP14	P36080	434 aa	Known RBP	5.03	□□□□□ -1.6
LSM4	YER112W	ECM21	P38167	1117 aa	Known RBP	5.03	□□□□□ -1.6
LSM4	YER112W	YBR238C	P38330	731 aa	Known RBP	5.03	□□□□□ -1.6
LSM4	YER112W	ZRG8	P40021	1076 aa		5.03	□□□□□ -1.6
LSM4	YER112W	TOK1	P40310	691 aa		5.03	□□□□□ -1.6
LSM4	YER112W	AIM39	Q08223	395 aa		5.03	□□□□□ -1.6
LSM4	YER112W	PFK1	P16861	987 aa	Known RBP	5.02	□□□□□ -1.61
LSM4	YER112W	OAR1	P35731	278 aa		5.02	□□□□□ -1.61
LSM4	YER112W	BET3	P36149	193 aa		5.02	□□□□□ -1.61
LSM4	YER112W	NIT3	P49954	291 aa		5.02	□□□□□ -1.61
LSM4	YER112W	PSP2	P50109	593 aa	Known RBP	5.02	□□□□□ -1.61
LSM4	YER112W	RTA1	P53047	317 aa		5.02	□□□□□ -1.61
LSM4	YER112W	RNH70	P53331	553 aa		5.02	□□□□□ -1.61
LSM4	YER112W	BUL2	Q03758	920 aa	Known RBP	5.02	□□□□□ -1.61
LSM4	YER112W	HSF1	P10961	833 aa		5.01	□□□□□ -1.61
LSM4	YER112W	TOP3	P13099	656 aa		5.01	□□□□□ -1.61
LSM4	YER112W	SFB2	P53953	876 aa		5.01	□□□□□ -1.61
LSM4	YER112W	VPS30	Q02948	557 aa		5.01	□□□□□ -1.61
LSM4	YER112W	POB3	Q04636	552 aa	Known RBP	5.01	□□□□□ -1.61
LSM4	YER112W	XYL2	Q07993	356 aa		5.01	□□□□□ -1.61
LSM4	YER112W	MET6	P05694	767 aa	Known RBP	5	□□□□□ -1.61
LSM4	YER112W	ERR1	P0CX10	437 aa		5	□□□□□ -1.61
LSM4	YER112W	ERR2	P0CX11	437 aa		5	□□□□□ -1.61
LSM4	YER112W	ENA1	P13587	1091 aa		5	□□□□□ -1.61
LSM4	YER112W	HRR25	P29295	494 aa	Known RBP	5	□□□□□ -1.61
LSM4	YER112W	THI4	P32318	326 aa		5	□□□□□ -1.61
LSM4	YER112W	MOH1	P38191	138 aa		5	□□□□□ -1.61
LSM4	YER112W	NPP2	P39997	493 aa		5	□□□□□ -1.61
LSM4	YER112W	ALG2	P43636	503 aa		5	□□□□□ -1.61
LSM4	YER112W	YKE2	P52553	114 aa		5	□□□□□ -1.61
LSM4	YER112W	YGR012W	P53206	393 aa		5	□□□□□ -1.61
LSM4	YER112W	ENA2	Q01896	1091 aa		5	□□□□□ -1.61
LSM4	YER112W	ENA5	Q12691	1091 aa		5	□□□□□ -1.61
LSM4	YER112W	MPH2	P0CD99	609 aa		4.99	□□□□□ -1.61
LSM4	YER112W	RFA1	P22336	621 aa	Known RBP	4.99	□□□□□ -1.61
LSM4	YER112W	SRP101	P32916	621 aa		4.99	□□□□□ -1.61
LSM4	YER112W	HSV2	P50079	448 aa	Predicted RBP	4.99	□□□□□ -1.61
LSM4	YER112W	ATG19	P35193	415 aa		4.98	□□□□□ -1.61
LSM4	YER112W	ERT1	P38140	529 aa		4.98	□□□□□ -1.61
LSM4	YER112W	GDH3	P39708	457 aa		4.98	□□□□□ -1.61
LSM4	YER112W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
LSM4	YER112W	RAI1	P53063	387 aa	Known RBP	4.98	□□□□□ -1.61
LSM4	YER112W	DAM1	P53267	343 aa		4.98	□□□□□ -1.61
LSM4	YER112W	ALG12	P53730	551 aa		4.98	□□□□□ -1.61
LSM4	YER112W	ENB1	Q08299	606 aa		4.98	□□□□□ -1.61
LSM4	YER112W	KCS1	Q12494	1050 aa		4.98	□□□□□ -1.61
LSM4	YER112W	NOT3	P06102	836 aa	Known RBP	4.97	□□□□□ -1.61
LSM4	YER112W	UBA2	P52488	636 aa		4.97	□□□□□ -1.61
LSM4	YER112W	CDA1	Q06702	301 aa		4.97	□□□□□ -1.61
LSM4	YER112W	ENV7	Q12003	364 aa		4.97	□□□□□ -1.61
LSM4	YER112W	SPE1	P08432	466 aa		4.96	□□□□□ -1.62
LSM4	YER112W	GSY1	P23337	708 aa		4.96	□□□□□ -1.62
LSM4	YER112W	MSH2	P25847	964 aa		4.96	□□□□□ -1.62
LSM4	YER112W	EMC3	P36039	253 aa		4.96	□□□□□ -1.62
LSM4	YER112W	REH1	Q06709	432 aa		4.96	□□□□□ -1.62
LSM4	YER112W	RPS9A	O13516	197 aa	Known RBP	4.95	□□□□□ -1.62
LSM4	YER112W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
LSM4	YER112W	URA1	P28272	314 aa	Predicted RBP	4.95	□□□□□ -1.62
LSM4	YER112W	STE13	P33894	931 aa		4.95	□□□□□ -1.62
LSM4	YER112W	FPR3	P38911	411 aa	Known RBP	4.95	□□□□□ -1.62
LSM4	YER112W	YGR283C	P53336	341 aa	Predicted RBP	4.95	□□□□□ -1.62
LSM4	YER112W	NOG2	P53742	486 aa	Known RBP	4.95	□□□□□ -1.62
LSM4	YER112W	UGO1	Q03327	502 aa		4.95	□□□□□ -1.62
LSM4	YER112W	UTP14	Q04500	899 aa	Known RBP	4.95	□□□□□ -1.62
LSM4	YER112W	SPC29	P33419	253 aa		4.94	□□□□□ -1.62
LSM4	YER112W	GYP8	P43570	497 aa		4.94	□□□□□ -1.62
LSM4	YER112W	YDR514C	Q04408	483 aa		4.94	□□□□□ -1.62
LSM4	YER112W	TYE7	P33122	291 aa	Predicted RBP	4.93	□□□□□ -1.62
LSM4	YER112W	DOS2	P54858	310 aa		4.93	□□□□□ -1.62
LSM4	YER112W	ATP25	Q03153	612 aa		4.93	□□□□□ -1.62
LSM4	YER112W	NPC2	Q12408	173 aa		4.93	□□□□□ -1.62
LSM4	YER112W	MDM12	Q92328	271 aa		4.93	□□□□□ -1.62
LSM4	YER112W	EFT1	P32324	842 aa	Known RBP	4.92	□□□□□ -1.62
LSM4	YER112W	URM1	P40554	99 aa	Predicted RBP	4.92	□□□□□ -1.62
LSM4	YER112W	CEP3	P40969	608 aa		4.92	□□□□□ -1.62
LSM4	YER112W	MAL11	P53048	616 aa		4.92	□□□□□ -1.62
LSM4	YER112W	NCS6	P53088	359 aa		4.92	□□□□□ -1.62
LSM4	YER112W	PUS2	P53167	370 aa		4.92	□□□□□ -1.62
LSM4	YER112W	YKR011C	Q02209	353 aa		4.92	□□□□□ -1.62
LSM4	YER112W	MET7	Q08645	548 aa		4.92	□□□□□ -1.62
LSM4	YER112W	GUP2	Q08929	609 aa		4.92	□□□□□ -1.62
LSM4	YER112W	PEX6	P33760	1030 aa		4.91	□□□□□ -1.62
LSM4	YER112W	BRN1	P38170	754 aa		4.91	□□□□□ -1.62
LSM4	YER112W	MNN1	P39106	762 aa		4.91	□□□□□ -1.62
LSM4	YER112W	DSS1	P39112	969 aa		4.91	□□□□□ -1.62
LSM4	YER112W	NTG2	Q08214	380 aa		4.91	□□□□□ -1.62
LSM4	YER112W	LAS17	Q12446	633 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms