RNA–Protein interactions for RNA: YDR528W

HLR1, Transcript of Protein involved in regulation of cell wall composition and integrity, yeast

Gene HLR1, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HLR1	YDR528W	PET10	P36139	283 aa		4.29	□□□□□ -1.72
HLR1	YDR528W	ECM21	P38167	1117 aa	Known RBP	4.29	□□□□□ -1.72
HLR1	YDR528W	MOH1	P38191	138 aa		4.29	□□□□□ -1.72
HLR1	YDR528W	MET12	P46151	657 aa		4.29	□□□□□ -1.72
HLR1	YDR528W	HIS5	P07172	385 aa		4.28	□□□□□ -1.72
HLR1	YDR528W	TOM70	P07213	617 aa	Known RBP	4.28	□□□□□ -1.72
HLR1	YDR528W	SPE1	P08432	466 aa		4.28	□□□□□ -1.72
HLR1	YDR528W	MSD1	P15179	658 aa	Known RBP	4.28	□□□□□ -1.72
HLR1	YDR528W	CDC48	P25694	835 aa	Known RBP	4.28	□□□□□ -1.72
HLR1	YDR528W	TIM23	P32897	222 aa		4.28	□□□□□ -1.72
HLR1	YDR528W	OAR1	P35731	278 aa		4.28	□□□□□ -1.72
HLR1	YDR528W	YBR284W	P38150	797 aa		4.28	□□□□□ -1.72
HLR1	YDR528W	TSL1	P38427	1098 aa	Known RBP	4.28	□□□□□ -1.72
HLR1	YDR528W	NMD2	P38798	1089 aa	Known RBP	4.28	□□□□□ -1.72
HLR1	YDR528W	NUP82	P40368	713 aa		4.28	□□□□□ -1.72
HLR1	YDR528W	UBP6	P43593	499 aa	Known RBP	4.28	□□□□□ -1.72
HLR1	YDR528W	SFB2	P53953	876 aa		4.28	□□□□□ -1.72
HLR1	YDR528W	PHO8	P11491	566 aa		4.27	□□□□□ -1.73
HLR1	YDR528W	HRR25	P29295	494 aa	Known RBP	4.27	□□□□□ -1.73
HLR1	YDR528W	PPG1	P32838	368 aa		4.27	□□□□□ -1.73
HLR1	YDR528W	REC104	P33323	182 aa		4.27	□□□□□ -1.73
HLR1	YDR528W	RRP14	P36080	434 aa	Known RBP	4.27	□□□□□ -1.73
HLR1	YDR528W	YBR238C	P38330	731 aa	Known RBP	4.27	□□□□□ -1.73
HLR1	YDR528W	BUL2	Q03758	920 aa	Known RBP	4.27	□□□□□ -1.73
HLR1	YDR528W	YPR196W	Q06595	470 aa		4.27	□□□□□ -1.73
HLR1	YDR528W	YPR071W	Q12346	211 aa		4.27	□□□□□ -1.73
HLR1	YDR528W	RPP2A	P05319	106 aa	Known RBP	4.26	□□□□□ -1.73
HLR1	YDR528W	NPP1	P25353	742 aa		4.26	□□□□□ -1.73
HLR1	YDR528W	AFR1	P33304	620 aa		4.26	□□□□□ -1.73
HLR1	YDR528W	BET3	P36149	193 aa		4.26	□□□□□ -1.73
HLR1	YDR528W	TOK1	P40310	691 aa		4.26	□□□□□ -1.73
HLR1	YDR528W	CHA4	P43634	648 aa		4.26	□□□□□ -1.73
HLR1	YDR528W	RTA1	P53047	317 aa		4.26	□□□□□ -1.73
HLR1	YDR528W	RNH70	P53331	553 aa		4.26	□□□□□ -1.73
HLR1	YDR528W	HSF1	P10961	833 aa		4.25	□□□□□ -1.73
HLR1	YDR528W	PFK1	P16861	987 aa	Known RBP	4.25	□□□□□ -1.73
HLR1	YDR528W	PSP2	P50109	593 aa	Known RBP	4.25	□□□□□ -1.73
HLR1	YDR528W	UBA2	P52488	636 aa		4.25	□□□□□ -1.73
HLR1	YDR528W	YKE2	P52553	114 aa		4.25	□□□□□ -1.73
HLR1	YDR528W	EXG2	P52911	562 aa		4.25	□□□□□ -1.73
HLR1	YDR528W	POB3	Q04636	552 aa	Known RBP	4.25	□□□□□ -1.73
HLR1	YDR528W	AIM39	Q08223	395 aa		4.25	□□□□□ -1.73
HLR1	YDR528W	KCS1	Q12494	1050 aa		4.25	□□□□□ -1.73
HLR1	YDR528W	MET6	P05694	767 aa	Known RBP	4.24	□□□□□ -1.73
HLR1	YDR528W	ERR1	P0CX10	437 aa		4.24	□□□□□ -1.73
HLR1	YDR528W	ERR2	P0CX11	437 aa		4.24	□□□□□ -1.73
HLR1	YDR528W	TOP3	P13099	656 aa		4.24	□□□□□ -1.73
HLR1	YDR528W	THI4	P32318	326 aa		4.24	□□□□□ -1.73
HLR1	YDR528W	ALG2	P43636	503 aa		4.24	□□□□□ -1.73
HLR1	YDR528W	NIT3	P49954	291 aa		4.24	□□□□□ -1.73
HLR1	YDR528W	VPS30	Q02948	557 aa		4.24	□□□□□ -1.73
HLR1	YDR528W	WHI4	Q07655	649 aa	Known RBP	4.24	□□□□□ -1.73
HLR1	YDR528W	MPH2	P0CD99	609 aa		4.23	□□□□□ -1.73
HLR1	YDR528W	RFA1	P22336	621 aa	Known RBP	4.23	□□□□□ -1.73
HLR1	YDR528W	ERT1	P38140	529 aa		4.23	□□□□□ -1.73
HLR1	YDR528W	URM1	P40554	99 aa	Predicted RBP	4.23	□□□□□ -1.73
HLR1	YDR528W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
HLR1	YDR528W	HSV2	P50079	448 aa	Predicted RBP	4.23	□□□□□ -1.73
HLR1	YDR528W	ALG12	P53730	551 aa		4.23	□□□□□ -1.73
HLR1	YDR528W	NPC2	Q12408	173 aa		4.23	□□□□□ -1.73
HLR1	YDR528W	ATG19	P35193	415 aa		4.22	□□□□□ -1.73
HLR1	YDR528W	EMC3	P36039	253 aa		4.22	□□□□□ -1.73
HLR1	YDR528W	GDH3	P39708	457 aa		4.22	□□□□□ -1.73
HLR1	YDR528W	RAI1	P53063	387 aa	Known RBP	4.22	□□□□□ -1.73
HLR1	YDR528W	NCS6	P53088	359 aa		4.22	□□□□□ -1.73
HLR1	YDR528W	DAM1	P53267	343 aa		4.22	□□□□□ -1.73
HLR1	YDR528W	GSY1	P23337	708 aa		4.21	□□□□□ -1.74
HLR1	YDR528W	MSH2	P25847	964 aa		4.21	□□□□□ -1.74
HLR1	YDR528W	UGO1	Q03327	502 aa		4.21	□□□□□ -1.74
HLR1	YDR528W	ENV7	Q12003	364 aa		4.21	□□□□□ -1.74
HLR1	YDR528W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
HLR1	YDR528W	NOT3	P06102	836 aa	Known RBP	4.2	□□□□□ -1.74
HLR1	YDR528W	FPR3	P38911	411 aa	Known RBP	4.2	□□□□□ -1.74
HLR1	YDR528W	YGR283C	P53336	341 aa	Predicted RBP	4.2	□□□□□ -1.74
HLR1	YDR528W	NOG2	P53742	486 aa	Known RBP	4.2	□□□□□ -1.74
HLR1	YDR528W	UTP14	Q04500	899 aa	Known RBP	4.2	□□□□□ -1.74
HLR1	YDR528W	REH1	Q06709	432 aa		4.2	□□□□□ -1.74
HLR1	YDR528W	LAS17	Q12446	633 aa		4.2	□□□□□ -1.74
HLR1	YDR528W	RPS9A	O13516	197 aa	Known RBP	4.19	□□□□□ -1.74
HLR1	YDR528W	URA1	P28272	314 aa	Predicted RBP	4.19	□□□□□ -1.74
HLR1	YDR528W	SPC29	P33419	253 aa		4.19	□□□□□ -1.74
HLR1	YDR528W	STE13	P33894	931 aa		4.19	□□□□□ -1.74
HLR1	YDR528W	GYP8	P43570	497 aa		4.19	□□□□□ -1.74
HLR1	YDR528W	DOS2	P54858	310 aa		4.19	□□□□□ -1.74
HLR1	YDR528W	ATP25	Q03153	612 aa		4.19	□□□□□ -1.74
HLR1	YDR528W	YDR514C	Q04408	483 aa		4.19	□□□□□ -1.74
HLR1	YDR528W	UPC2	Q12151	913 aa		4.19	□□□□□ -1.74
HLR1	YDR528W	KAR4	P25583	335 aa		4.18	□□□□□ -1.74
HLR1	YDR528W	TYE7	P33122	291 aa	Predicted RBP	4.18	□□□□□ -1.74
HLR1	YDR528W	ATF1	P40353	525 aa		4.18	□□□□□ -1.74
HLR1	YDR528W	MAL11	P53048	616 aa		4.18	□□□□□ -1.74
HLR1	YDR528W	MDM12	Q92328	271 aa		4.18	□□□□□ -1.74
HLR1	YDR528W	PEX6	P33760	1030 aa		4.17	□□□□□ -1.74
HLR1	YDR528W	BRN1	P38170	754 aa		4.17	□□□□□ -1.74
HLR1	YDR528W	PUS2	P53167	370 aa		4.17	□□□□□ -1.74
HLR1	YDR528W	YKR011C	Q02209	353 aa		4.17	□□□□□ -1.74
HLR1	YDR528W	LGE1	Q02796	332 aa	Known RBP	4.17	□□□□□ -1.74
HLR1	YDR528W	SSL1	Q04673	461 aa	Predicted RBP	4.17	□□□□□ -1.74
HLR1	YDR528W	YLR040C	Q07988	224 aa		4.17	□□□□□ -1.74
HLR1	YDR528W	ENB1	Q08299	606 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 144.9 ms