RNA–Protein interactions for RNA: YDR261C-C

YDR261C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261C-C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261C-CYDR261C-C URA1P28272 314 aaPredicted RBP5.66□□□□□ -1.5
YDR261C-CYDR261C-C PRP19P32523 503 aaKnown RBP5.66□□□□□ -1.5
YDR261C-CYDR261C-C DUG1P43616 481 aaKnown RBP5.66□□□□□ -1.5
YDR261C-CYDR261C-C NBA1Q08229 501 aaKnown RBP5.66□□□□□ -1.5
YDR261C-CYDR261C-C YTM1Q12024 460 aaPredicted RBP5.66□□□□□ -1.5
YDR261C-CYDR261C-C TMA7Q3E764 64 aaKnown RBP5.66□□□□□ -1.5
YDR261C-CYDR261C-C YBR182C-AQ8TGU6 64 aa5.66□□□□□ -1.5
YDR261C-CYDR261C-C NOT3P06102 836 aaKnown RBP5.65□□□□□ -1.51
YDR261C-CYDR261C-C CCR4P31384 837 aaKnown RBP5.65□□□□□ -1.51
YDR261C-CYDR261C-C PLC1P32383 869 aa5.65□□□□□ -1.51
YDR261C-CYDR261C-C PMC1P38929 1173 aaPredicted RBP5.65□□□□□ -1.51
YDR261C-CYDR261C-C OAF1P39720 1047 aaPredicted RBP5.65□□□□□ -1.51
YDR261C-CYDR261C-C NHX1Q04121 633 aa5.65□□□□□ -1.51
YDR261C-CYDR261C-C SIZ1Q04195 904 aa5.65□□□□□ -1.51
YDR261C-CYDR261C-C YPR196WQ06595 470 aa5.65□□□□□ -1.51
YDR261C-CYDR261C-C TRE2Q08693 809 aa5.65□□□□□ -1.51
YDR261C-CYDR261C-C MSB1P21339 1137 aaKnown RBP5.64□□□□□ -1.51
YDR261C-CYDR261C-C STE13P33894 931 aa5.64□□□□□ -1.51
YDR261C-CYDR261C-C RLP7P40693 322 aaKnown RBP5.64□□□□□ -1.51
YDR261C-CYDR261C-C GZF3P42944 551 aaKnown RBP5.64□□□□□ -1.51
YDR261C-CYDR261C-C NIT2P47016 307 aa5.64□□□□□ -1.51
YDR261C-CYDR261C-C ALY2P47029 1046 aa5.64□□□□□ -1.51
YDR261C-CYDR261C-C NSG2P53898 299 aa5.64□□□□□ -1.51
YDR261C-CYDR261C-C SND1Q04007 877 aa5.64□□□□□ -1.51
YDR261C-CYDR261C-C SLX4Q12098 748 aa5.64□□□□□ -1.51
YDR261C-CYDR261C-C RFC5P38251 354 aa5.63□□□□□ -1.51
YDR261C-CYDR261C-C CCT5P40413 562 aaKnown RBP5.63□□□□□ -1.51
YDR261C-CYDR261C-C MSC2Q03455 724 aa5.63□□□□□ -1.51
YDR261C-CYDR261C-C CDA1Q06702 301 aa5.63□□□□□ -1.51
YDR261C-CYDR261C-C ATP4P05626 244 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C RFA1P22336 621 aaKnown RBP5.62□□□□□ -1.51
YDR261C-CYDR261C-C AIM26P32858 118 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C PTC7P38797 343 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C RPN10P38886 268 aaKnown RBP5.62□□□□□ -1.51
YDR261C-CYDR261C-C GPP2P40106 250 aaKnown RBP5.62□□□□□ -1.51
YDR261C-CYDR261C-C GTS1P40956 396 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C MNN11P46985 422 aaKnown RBP5.62□□□□□ -1.51
YDR261C-CYDR261C-C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
YDR261C-CYDR261C-C PEX14P53112 341 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C YNL034WP53963 612 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C YNL018CP53976 612 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C YKR011CQ02209 353 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C YMR187CQ03236 431 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C THI21Q08975 551 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C YLR122CQ12312 125 aa5.62□□□□□ -1.51
YDR261C-CYDR261C-C SPS1P08458 490 aa5.61□□□□□ -1.51
YDR261C-CYDR261C-C FBP1P09201 348 aa5.61□□□□□ -1.51
YDR261C-CYDR261C-C APL1P27351 700 aa5.61□□□□□ -1.51
YDR261C-CYDR261C-C CYS3P31373 394 aaKnown RBP5.61□□□□□ -1.51
YDR261C-CYDR261C-C HSL7P38274 827 aa5.61□□□□□ -1.51
YDR261C-CYDR261C-C SKN7P38889 622 aa5.61□□□□□ -1.51
YDR261C-CYDR261C-C UBC9P50623 157 aaPredicted RBP5.61□□□□□ -1.51
YDR261C-CYDR261C-C RAI1P53063 387 aaKnown RBP5.61□□□□□ -1.51
YDR261C-CYDR261C-C ECM9Q02202 377 aa5.61□□□□□ -1.51
YDR261C-CYDR261C-C YPL034WQ03083 165 aa5.61□□□□□ -1.51
YDR261C-CYDR261C-C SSY1Q03770 852 aa5.61□□□□□ -1.51
YDR261C-CYDR261C-C LPX1Q12405 387 aaKnown RBP5.61□□□□□ -1.51
YDR261C-CYDR261C-C DIF1O13577 133 aa5.6□□□□□ -1.51
YDR261C-CYDR261C-C GCD1P09032 578 aaPredicted RBP5.6□□□□□ -1.51
YDR261C-CYDR261C-C RPD3P32561 433 aa5.6□□□□□ -1.51
YDR261C-CYDR261C-C TFC4P33339 1025 aa5.6□□□□□ -1.51
YDR261C-CYDR261C-C TAT1P38085 619 aa5.6□□□□□ -1.51
YDR261C-CYDR261C-C SET5P38890 526 aaKnown RBP5.6□□□□□ -1.51
YDR261C-CYDR261C-C RET2P43621 546 aa5.6□□□□□ -1.51
YDR261C-CYDR261C-C PHM7Q12252 991 aa5.6□□□□□ -1.51
YDR261C-CYDR261C-C PIF1P07271 859 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C AEP2P22136 580 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C COQ2P32378 372 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C DAL3P32459 195 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C SRP101P32916 621 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C SWE1P32944 819 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C TYE7P33122 291 aaPredicted RBP5.59□□□□□ -1.51
YDR261C-CYDR261C-C HXT6P39003 570 aaKnown RBP5.59□□□□□ -1.51
YDR261C-CYDR261C-C HXT7P39004 570 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C PEA2P40091 420 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C CEP3P40969 608 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C MCA1Q08601 432 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C YPR053CQ6Q5F3 151 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C YLR149CQ99296 730 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C MPD2Q99316 277 aa5.59□□□□□ -1.51
YDR261C-CYDR261C-C HSF1P10961 833 aa5.58□□□□□ -1.52
YDR261C-CYDR261C-C SST2P11972 698 aaKnown RBP5.58□□□□□ -1.52
YDR261C-CYDR261C-C KIN2P13186 1147 aaKnown RBP5.58□□□□□ -1.52
YDR261C-CYDR261C-C CHS2P14180 963 aa5.58□□□□□ -1.52
YDR261C-CYDR261C-C HIR1P32479 840 aa5.58□□□□□ -1.52
YDR261C-CYDR261C-C DID4P36108 232 aa5.58□□□□□ -1.52
YDR261C-CYDR261C-C YKR051WP36142 418 aa5.58□□□□□ -1.52
YDR261C-CYDR261C-C BNA2P47125 453 aa5.58□□□□□ -1.52
YDR261C-CYDR261C-C ENV11P53246 860 aa5.58□□□□□ -1.52
YDR261C-CYDR261C-C SSL1Q04673 461 aaPredicted RBP5.58□□□□□ -1.52
YDR261C-CYDR261C-C YOR022CQ12204 715 aa5.58□□□□□ -1.52
YDR261C-CYDR261C-C RPS9AO13516 197 aaKnown RBP5.57□□□□□ -1.52
YDR261C-CYDR261C-C VPS24P36095 224 aaKnown RBP5.57□□□□□ -1.52
YDR261C-CYDR261C-C DOT6P40059 670 aaKnown RBP5.57□□□□□ -1.52
YDR261C-CYDR261C-C YGR153WP48238 217 aa5.57□□□□□ -1.52
YDR261C-CYDR261C-C ZIP2P53061 704 aa5.57□□□□□ -1.52
YDR261C-CYDR261C-C YGR012WP53206 393 aa5.57□□□□□ -1.52
YDR261C-CYDR261C-C ORC3P54790 616 aa5.57□□□□□ -1.52
YDR261C-CYDR261C-C RSM24Q03976 319 aa5.57□□□□□ -1.52
YDR261C-CYDR261C-C HFI1Q12060 488 aa5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms