RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W STE13P33894 931 aa3.82□□□□□ -1.8
CDC50YCR094W YBR238CP38330 731 aaKnown RBP3.82□□□□□ -1.8
CDC50YCR094W VPS73P53142 486 aaKnown RBP3.82□□□□□ -1.8
CDC50YCR094W YAP7Q08182 245 aa3.82□□□□□ -1.8
CDC50YCR094W YNL162W-AQ3E7A8 72 aa3.82□□□□□ -1.8
CDC50YCR094W CAF20P12962 161 aaKnown RBP3.81□□□□□ -1.8
CDC50YCR094W CDC48P25694 835 aaKnown RBP3.81□□□□□ -1.8
CDC50YCR094W NPP1P25353 742 aa3.8□□□□□ -1.8
CDC50YCR094W RPD3P32561 433 aa3.8□□□□□ -1.8
CDC50YCR094W MUP1P50276 574 aa3.8□□□□□ -1.8
CDC50YCR094W YGR053CP53234 283 aa3.8□□□□□ -1.8
CDC50YCR094W SWM1Q12379 170 aa3.8□□□□□ -1.8
CDC50YCR094W HCA4P20448 770 aaKnown RBP3.79□□□□□ -1.8
CDC50YCR094W ILV6P25605 309 aaKnown RBP3.79□□□□□ -1.8
CDC50YCR094W PCL5P38794 229 aa3.79□□□□□ -1.8
CDC50YCR094W CTF8P38877 133 aa3.79□□□□□ -1.8
CDC50YCR094W FKH2P41813 862 aa3.79□□□□□ -1.8
CDC50YCR094W GUS1P46655 708 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
CDC50YCR094W MRPS35P53292 345 aa3.79□□□□□ -1.8
CDC50YCR094W MET6P05694 767 aaKnown RBP3.78□□□□□ -1.8
CDC50YCR094W TMT1P32643 299 aa3.78□□□□□ -1.8
CDC50YCR094W MNR2P35724 969 aa3.78□□□□□ -1.8
CDC50YCR094W YIL108WP40483 696 aaKnown RBP3.78□□□□□ -1.8
CDC50YCR094W THI7Q05998 598 aa3.78□□□□□ -1.8
CDC50YCR094W ARO10Q06408 635 aa3.78□□□□□ -1.8
CDC50YCR094W CDC43P18898 376 aa3.77□□□□□ -1.81
CDC50YCR094W AFR1P33304 620 aa3.77□□□□□ -1.81
CDC50YCR094W YBR053CP38235 358 aa3.77□□□□□ -1.81
CDC50YCR094W RPP1P38786 293 aa3.77□□□□□ -1.81
CDC50YCR094W FAA4P47912 694 aaKnown RBP3.77□□□□□ -1.81
CDC50YCR094W VPS30Q02948 557 aa3.77□□□□□ -1.81
CDC50YCR094W OYE2Q03558 400 aaKnown RBP3.77□□□□□ -1.81
CDC50YCR094W PRP4P20053 465 aaKnown RBP3.76□□□□□ -1.81
CDC50YCR094W KIN3P22209 435 aa3.76□□□□□ -1.81
CDC50YCR094W SBA1P28707 216 aaKnown RBP3.76□□□□□ -1.81
CDC50YCR094W YIL166CP40445 542 aa3.76□□□□□ -1.81
CDC50YCR094W YJL163CP46996 555 aa3.76□□□□□ -1.81
CDC50YCR094W CRR1Q05790 422 aa3.76□□□□□ -1.81
CDC50YCR094W AGP1P25376 633 aa3.75□□□□□ -1.81
CDC50YCR094W ADY2P25613 283 aa3.75□□□□□ -1.81
CDC50YCR094W YDR306CQ06640 478 aa3.75□□□□□ -1.81
CDC50YCR094W PPH3P32345 308 aa3.74□□□□□ -1.81
CDC50YCR094W RIA1P53893 1110 aa3.74□□□□□ -1.81
CDC50YCR094W HDA1P53973 706 aa3.74□□□□□ -1.81
CDC50YCR094W GLO1P50107 326 aa3.73□□□□□ -1.81
CDC50YCR094W YKR011CQ02209 353 aa3.73□□□□□ -1.81
CDC50YCR094W GDE1Q02979 1223 aa3.73□□□□□ -1.81
CDC50YCR094W RFA1P22336 621 aaKnown RBP3.72□□□□□ -1.81
CDC50YCR094W TYE7P33122 291 aaPredicted RBP3.72□□□□□ -1.81
CDC50YCR094W VBA5P36172 582 aa3.72□□□□□ -1.81
CDC50YCR094W YHR078WP38799 552 aa3.72□□□□□ -1.81
CDC50YCR094W KRI1P42846 591 aaKnown RBP3.72□□□□□ -1.81
CDC50YCR094W SEC5P89102 971 aa3.72□□□□□ -1.81
CDC50YCR094W VPS16Q03308 798 aa3.72□□□□□ -1.81
CDC50YCR094W ADE8P04161 214 aa3.71□□□□□ -1.82
CDC50YCR094W YRO2P38079 344 aa3.71□□□□□ -1.82
CDC50YCR094W GGA2P38817 585 aaKnown RBP3.71□□□□□ -1.82
CDC50YCR094W VHR1P40522 640 aa3.71□□□□□ -1.82
CDC50YCR094W CEP3P40969 608 aa3.71□□□□□ -1.82
CDC50YCR094W AMA1P50082 593 aa3.71□□□□□ -1.82
CDC50YCR094W IRC13Q08630 104 aa3.71□□□□□ -1.82
CDC50YCR094W FAL1Q12099 399 aaKnown RBP3.71□□□□□ -1.82
CDC50YCR094W HEM3P28789 327 aa3.7□□□□□ -1.82
CDC50YCR094W AAR2P32357 355 aaPredicted RBP3.7□□□□□ -1.82
CDC50YCR094W ERT1P38140 529 aa3.7□□□□□ -1.82
CDC50YCR094W ASI2P53895 289 aa3.7□□□□□ -1.82
CDC50YCR094W SGO1Q08490 590 aa3.69□□□□□ -1.82
CDC50YCR094W DMC1P25453 334 aa3.68□□□□□ -1.82
CDC50YCR094W URA1P28272 314 aaPredicted RBP3.68□□□□□ -1.82
CDC50YCR094W CBR1P38626 284 aaKnown RBP3.68□□□□□ -1.82
CDC50YCR094W SIT1P39980 628 aa3.68□□□□□ -1.82
CDC50YCR094W APM1Q00776 475 aaPredicted RBP3.68□□□□□ -1.82
CDC50YCR094W PKH1Q03407 766 aa3.68□□□□□ -1.82
CDC50YCR094W BUL2Q03758 920 aaKnown RBP3.68□□□□□ -1.82
CDC50YCR094W SHE9Q04172 456 aa3.68□□□□□ -1.82
CDC50YCR094W YIR042CP40586 236 aa3.67□□□□□ -1.82
CDC50YCR094W CCM1P48237 864 aaPredicted RBP3.67□□□□□ -1.82
CDC50YCR094W SSL2Q00578 843 aa3.67□□□□□ -1.82
CDC50YCR094W ASF1P32447 279 aa3.66□□□□□ -1.82
CDC50YCR094W TOK1P40310 691 aa3.66□□□□□ -1.82
CDC50YCR094W DAM1P53267 343 aa3.66□□□□□ -1.82
CDC50YCR094W MRI1Q06489 411 aaKnown RBP3.66□□□□□ -1.82
CDC50YCR094W MPH2P0CD99 609 aa3.65□□□□□ -1.83
CDC50YCR094W SPO11P23179 398 aa3.65□□□□□ -1.83
CDC50YCR094W EMP70P32802 667 aa3.65□□□□□ -1.83
CDC50YCR094W HIS7P33734 552 aaKnown RBP3.65□□□□□ -1.83
CDC50YCR094W YKL069WP36088 180 aa3.65□□□□□ -1.83
CDC50YCR094W YJL206CP39529 758 aa3.65□□□□□ -1.83
CDC50YCR094W FMP52P40008 231 aa3.65□□□□□ -1.83
CDC50YCR094W CCT7P42943 550 aaKnown RBP3.65□□□□□ -1.83
CDC50YCR094W TEL2P53038 688 aa3.65□□□□□ -1.83
CDC50YCR094W SMX3P54999 86 aaPredicted RBP3.65□□□□□ -1.83
CDC50YCR094W NRG1Q03125 231 aa3.65□□□□□ -1.83
CDC50YCR094W MUS81Q04149 632 aaPredicted RBP3.65□□□□□ -1.83
CDC50YCR094W ASM4Q05166 528 aa3.65□□□□□ -1.83
CDC50YCR094W TAF3Q12297 353 aa3.65□□□□□ -1.83
CDC50YCR094W RPS9AO13516 197 aaKnown RBP3.64□□□□□ -1.83
CDC50YCR094W LAT1P12695 482 aaKnown RBP3.64□□□□□ -1.83
CDC50YCR094W BCD1P38772 366 aa3.64□□□□□ -1.83
CDC50YCR094W HSV2P50079 448 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 214.5 ms