RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W SUV3P32580 737 aa6.36□□□□□ -1.39
SHM1YBR263W SRP40P32583 406 aaPredicted RBP6.36□□□□□ -1.39
SHM1YBR263W SUL1P38359 859 aa6.36□□□□□ -1.39
SHM1YBR263W RET3P53600 189 aa6.36□□□□□ -1.39
SHM1YBR263W BUL2Q03758 920 aaKnown RBP6.36□□□□□ -1.39
SHM1YBR263W ERP3Q12403 225 aa6.36□□□□□ -1.39
SHM1YBR263W PGI1P12709 554 aaKnown RBP6.35□□□□□ -1.39
SHM1YBR263W IDI1P15496 288 aa6.35□□□□□ -1.39
SHM1YBR263W RDS1P25611 832 aa6.35□□□□□ -1.39
SHM1YBR263W RRM3P38766 723 aa6.35□□□□□ -1.39
SHM1YBR263W MXR1P40029 184 aa6.35□□□□□ -1.39
SHM1YBR263W YGL081WP53156 320 aa6.35□□□□□ -1.39
SHM1YBR263W PIL1P53252 339 aaKnown RBP6.35□□□□□ -1.39
SHM1YBR263W BNI5P53890 448 aaKnown RBP6.35□□□□□ -1.39
SHM1YBR263W PTA1Q01329 785 aaPredicted RBP6.35□□□□□ -1.39
SHM1YBR263W SLD5Q03406 294 aa6.35□□□□□ -1.39
SHM1YBR263W WHI4Q07655 649 aaKnown RBP6.35□□□□□ -1.39
SHM1YBR263W ISA1Q07821 250 aaPredicted RBP6.35□□□□□ -1.39
SHM1YBR263W LSP1Q12230 341 aaKnown RBP6.35□□□□□ -1.39
SHM1YBR263W RKM4Q12504 494 aa6.35□□□□□ -1.39
SHM1YBR263W ARP6Q12509 438 aa6.35□□□□□ -1.39
SHM1YBR263W PRE10P21242 288 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
SHM1YBR263W TKL1P23254 680 aaKnown RBP6.34□□□□□ -1.39
SHM1YBR263W MAC1P35192 417 aa6.34□□□□□ -1.39
SHM1YBR263W DBP7P36120 742 aaKnown RBP6.34□□□□□ -1.39
SHM1YBR263W CIT3P43635 486 aa6.34□□□□□ -1.39
SHM1YBR263W PEX14P53112 341 aa6.34□□□□□ -1.39
SHM1YBR263W YGL039WP53183 348 aaKnown RBP6.34□□□□□ -1.39
SHM1YBR263W ORC4P54791 529 aa6.34□□□□□ -1.39
SHM1YBR263W AIM33Q04516 312 aa6.34□□□□□ -1.39
SHM1YBR263W TY1B-AO13527 1196 aaKnown RBP6.34□□□□□ -1.4
SHM1YBR263W THR4P16120 514 aaKnown RBP6.34□□□□□ -1.4
SHM1YBR263W RGT1P32862 1170 aa6.34□□□□□ -1.4
SHM1YBR263W SAS3P34218 831 aa6.34□□□□□ -1.4
SHM1YBR263W REG2P38232 338 aa6.34□□□□□ -1.4
SHM1YBR263W STT3P39007 718 aaKnown RBP6.34□□□□□ -1.4
SHM1YBR263W BDH2P39713 417 aa6.34□□□□□ -1.4
SHM1YBR263W PSF2P40359 213 aa6.34□□□□□ -1.4
SHM1YBR263W SCS3P53012 380 aa6.34□□□□□ -1.4
SHM1YBR263W DSE4P53753 1117 aa6.34□□□□□ -1.4
SHM1YBR263W TRS120Q04183 1289 aa6.34□□□□□ -1.4
SHM1YBR263W YMR321CQ04898 105 aa6.34□□□□□ -1.4
SHM1YBR263W SLK19Q08581 821 aaKnown RBP6.34□□□□□ -1.4
SHM1YBR263W MET7Q08645 548 aa6.34□□□□□ -1.4
SHM1YBR263W PTC5Q12511 572 aa6.34□□□□□ -1.4
SHM1YBR263W TRS33Q99394 268 aa6.34□□□□□ -1.4
SHM1YBR263W SAC7P17121 654 aa6.33□□□□□ -1.4
SHM1YBR263W VMA3P25515 160 aa6.33□□□□□ -1.4
SHM1YBR263W SRO9P25567 434 aaKnown RBP6.33□□□□□ -1.4
SHM1YBR263W YUR1P26725 428 aa6.33□□□□□ -1.4
SHM1YBR263W URA1P28272 314 aaPredicted RBP6.33□□□□□ -1.4
SHM1YBR263W MCM4P30665 933 aaKnown RBP6.33□□□□□ -1.4
SHM1YBR263W PGM1P33401 570 aaKnown RBP6.33□□□□□ -1.4
SHM1YBR263W UBP11P36026 717 aa6.33□□□□□ -1.4
SHM1YBR263W OYE2Q03558 400 aaKnown RBP6.33□□□□□ -1.4
SHM1YBR263W CSM3Q04659 317 aa6.33□□□□□ -1.4
SHM1YBR263W EIS1Q05050 843 aaKnown RBP6.33□□□□□ -1.4
SHM1YBR263W YOR296WQ08748 1289 aa6.33□□□□□ -1.4
SHM1YBR263W MSC6Q08818 692 aaKnown RBP6.33□□□□□ -1.4
SHM1YBR263W ICL2Q12031 575 aa6.33□□□□□ -1.4
SHM1YBR263W TIP41Q12199 356 aa6.33□□□□□ -1.4
SHM1YBR263W VPS13Q07878 3144 aa6.32□□□□□ -1.4
SHM1YBR263W SES1P07284 462 aaKnown RBP6.32□□□□□ -1.4
SHM1YBR263W ALG1P16661 449 aa6.32□□□□□ -1.4
SHM1YBR263W IME2P32581 645 aa6.32□□□□□ -1.4
SHM1YBR263W SEC8P32855 1065 aa6.32□□□□□ -1.4
SHM1YBR263W VPS24P36095 224 aaKnown RBP6.32□□□□□ -1.4
SHM1YBR263W GAA1P39012 614 aa6.32□□□□□ -1.4
SHM1YBR263W HST1P53685 503 aa6.32□□□□□ -1.4
SHM1YBR263W FAR11P53917 953 aa6.32□□□□□ -1.4
SHM1YBR263W ULP1Q02724 621 aa6.32□□□□□ -1.4
SHM1YBR263W NBL1Q3E7Y6 73 aa6.32□□□□□ -1.4
SHM1YBR263W HXK1P04806 485 aaKnown RBP6.31□□□□□ -1.4
SHM1YBR263W MRPL33P20084 86 aa6.31□□□□□ -1.4
SHM1YBR263W TFC4P33339 1025 aa6.31□□□□□ -1.4
SHM1YBR263W ISW1P38144 1129 aa6.31□□□□□ -1.4
SHM1YBR263W HYR1P40581 163 aaKnown RBP6.31□□□□□ -1.4
SHM1YBR263W YGR153WP48238 217 aa6.31□□□□□ -1.4
SHM1YBR263W ARI1P53111 347 aaKnown RBP6.31□□□□□ -1.4
SHM1YBR263W BRE5P53741 515 aaKnown RBP6.31□□□□□ -1.4
SHM1YBR263W PEX19Q07418 342 aa6.31□□□□□ -1.4
SHM1YBR263W TRM11Q12463 433 aa6.31□□□□□ -1.4
SHM1YBR263W ILV1P00927 576 aaKnown RBP6.3□□□□□ -1.4
SHM1YBR263W MCM3P24279 971 aaKnown RBP6.3□□□□□ -1.4
SHM1YBR263W SFA1P32771 386 aa6.3□□□□□ -1.4
SHM1YBR263W BCS1P32839 456 aa6.3□□□□□ -1.4
SHM1YBR263W LEO1P38439 464 aa6.3□□□□□ -1.4
SHM1YBR263W DJP1P40564 432 aa6.3□□□□□ -1.4
SHM1YBR263W GPD2P41911 440 aaKnown RBP6.3□□□□□ -1.4
SHM1YBR263W INP52P50942 1183 aa6.3□□□□□ -1.4
SHM1YBR263W MFM1Q02783 413 aa6.3□□□□□ -1.4
SHM1YBR263W MMR1Q06324 491 aa6.3□□□□□ -1.4
SHM1YBR263W SUT2Q12286 268 aa6.3□□□□□ -1.4
SHM1YBR263W TUF1P02992 437 aaKnown RBP6.29□□□□□ -1.4
SHM1YBR263W POX1P13711 748 aa6.29□□□□□ -1.4
SHM1YBR263W FRS2P15625 503 aaKnown RBP6.29□□□□□ -1.4
SHM1YBR263W GSY1P23337 708 aa6.29□□□□□ -1.4
SHM1YBR263W PAH1P32567 862 aa6.29□□□□□ -1.4
SHM1YBR263W ELM1P32801 640 aa6.29□□□□□ -1.4
SHM1YBR263W OMA1P36163 345 aa6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms