RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	CCM1	P48237	864 aa	Predicted RBP	6.37	□□□□□ -1.39
ATG12	YBR217W	LSC2	P53312	427 aa		6.37	□□□□□ -1.39
ATG12	YBR217W	PNG1	Q02890	363 aa		6.37	□□□□□ -1.39
ATG12	YBR217W	SKY1	Q03656	742 aa		6.37	□□□□□ -1.39
ATG12	YBR217W	YOL075C	Q08234	1294 aa		6.37	□□□□□ -1.39
ATG12	YBR217W	TRS33	Q99394	268 aa		6.37	□□□□□ -1.39
ATG12	YBR217W	PRC1	P00729	532 aa		6.36	□□□□□ -1.39
ATG12	YBR217W	TIF1	P10081	395 aa	Known RBP	6.36	□□□□□ -1.39
ATG12	YBR217W	RPL4A	P10664	362 aa	Known RBP	6.36	□□□□□ -1.39
ATG12	YBR217W	TAF13	P11747	167 aa		6.36	□□□□□ -1.39
ATG12	YBR217W	MSD1	P15179	658 aa	Known RBP	6.36	□□□□□ -1.39
ATG12	YBR217W	MRF1	P30775	413 aa	Predicted RBP	6.36	□□□□□ -1.39
ATG12	YBR217W	BUD2	P33314	1104 aa		6.36	□□□□□ -1.39
ATG12	YBR217W	RPL4B	P49626	362 aa	Known RBP	6.36	□□□□□ -1.39
ATG12	YBR217W	ALT2	P52892	507 aa		6.36	□□□□□ -1.39
ATG12	YBR217W	HAP5	Q02516	242 aa		6.36	□□□□□ -1.39
ATG12	YBR217W	UTP14	Q04500	899 aa	Known RBP	6.36	□□□□□ -1.39
ATG12	YBR217W	SHS1	Q07657	551 aa		6.36	□□□□□ -1.39
ATG12	YBR217W	TCO89	Q08921	799 aa		6.36	□□□□□ -1.39
ATG12	YBR217W	AFT2	Q08957	416 aa		6.36	□□□□□ -1.39
ATG12	YBR217W	CDC53	Q12018	815 aa	Known RBP	6.36	□□□□□ -1.39
ATG12	YBR217W	YOR022C	Q12204	715 aa		6.36	□□□□□ -1.39
ATG12	YBR217W	LAA1	P39526	2014 aa		6.35	□□□□□ -1.39
ATG12	YBR217W	RPL22A	P05749	121 aa	Known RBP	6.35	□□□□□ -1.39
ATG12	YBR217W	RSA4	P25382	515 aa	Known RBP	6.35	□□□□□ -1.39
ATG12	YBR217W	ADK2	P26364	225 aa		6.35	□□□□□ -1.39
ATG12	YBR217W	PRR1	P28708	518 aa		6.35	□□□□□ -1.39
ATG12	YBR217W	PSO2	P30620	661 aa		6.35	□□□□□ -1.39
ATG12	YBR217W	SKG6	P32900	734 aa	Predicted RBP	6.35	□□□□□ -1.39
ATG12	YBR217W	RVS167	P39743	482 aa	Known RBP	6.35	□□□□□ -1.39
ATG12	YBR217W	ESL1	P40456	1118 aa		6.35	□□□□□ -1.39
ATG12	YBR217W	TOS3	P43637	560 aa		6.35	□□□□□ -1.39
ATG12	YBR217W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	6.35	□□□□□ -1.39	not detected
ATG12	YBR217W	HSH155	P49955	971 aa	Known RBP	6.35	□□□□□ -1.39
ATG12	YBR217W	INP52	P50942	1183 aa		6.35	□□□□□ -1.39
ATG12	YBR217W	SPP382	Q06411	708 aa	Predicted RBP	6.35	□□□□□ -1.39
ATG12	YBR217W	SPT2	P06843	333 aa	Predicted RBP	6.34	□□□□□ -1.39
ATG12	YBR217W	URK1	P27515	501 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	MUD1	P32605	298 aa	Known RBP	6.34	□□□□□ -1.39
ATG12	YBR217W	RPT1	P33299	467 aa	Known RBP	6.34	□□□□□ -1.39
ATG12	YBR217W	APN2	P38207	520 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	MMS4	P38257	691 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	UBP5	P39944	805 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	BUD16	P39988	312 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	YER186C	P40101	306 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	FAF1	P40546	346 aa	Predicted RBP	6.34	□□□□□ -1.39
ATG12	YBR217W	LCB2	P40970	561 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	ASN1	P49089	572 aa	Known RBP	6.34	□□□□□ -1.39
ATG12	YBR217W	YGR237C	P50089	785 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	STB4	P50104	949 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	SHE10	P53075	577 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	VID30	P53076	958 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	MET13	P53128	600 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	ALG11	P53954	548 aa	Known RBP	6.34	□□□□□ -1.39
ATG12	YBR217W	MED1	Q12321	566 aa		6.34	□□□□□ -1.39
ATG12	YBR217W	IDI1	P15496	288 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	OM45	P16547	393 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	GSY2	P27472	705 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	MSP1	P28737	362 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	IME2	P32581	645 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	RFS1	P38234	210 aa	Known RBP	6.33	□□□□□ -1.4
ATG12	YBR217W	NPR3	P38742	1146 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	XDJ1	P39102	459 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	RSM25	P40496	264 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	ULI1	P43604	169 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	HEH2	Q03281	663 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	CWC21	Q03375	135 aa	Known RBP	6.33	□□□□□ -1.4
ATG12	YBR217W	MLH2	Q07980	695 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	ETT1	Q08421	412 aa	Known RBP	6.33	□□□□□ -1.4
ATG12	YBR217W	PKH2	Q12236	1081 aa	Known RBP	6.33	□□□□□ -1.4
ATG12	YBR217W	AIM44	Q99299	758 aa		6.33	□□□□□ -1.4
ATG12	YBR217W	CIT2	P08679	460 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	VMA1	P17255	1071 aa	Known RBP	6.32	□□□□□ -1.4
ATG12	YBR217W	SEC21	P32074	935 aa	Known RBP	6.32	□□□□□ -1.4
ATG12	YBR217W	RPN12	P32496	274 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	PEX2	P32800	271 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.32	□□□□□ -1.4	not detected
ATG12	YBR217W	GCS1	P35197	352 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	MNR2	P35724	969 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	HEL1	P36113	551 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	MRPL7	P36519	292 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	BCD1	P38772	366 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	SNF7	P39929	240 aa	Known RBP	6.32	□□□□□ -1.4
ATG12	YBR217W	NPP2	P39997	493 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	YFL052W	P43551	465 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	ISM1	P48526	1002 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	KRE33	P53914	1056 aa	Known RBP	6.32	□□□□□ -1.4
ATG12	YBR217W	TIM8	P57744	87 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	EEB1	Q02891	456 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	SPP1	Q03012	353 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	ESC8	Q08119	714 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	OSH2	Q12451	1283 aa		6.32	□□□□□ -1.4
ATG12	YBR217W	ASP3-2	P0CX77	362 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	ASP3-3	P0CX78	362 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	ASP3-4	P0CX79	362 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	ASP3-1	P0CZ17	362 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	CHS2	P14180	963 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	TRM2	P33753	639 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	CCL1	P37366	393 aa		6.31	□□□□□ -1.4
ATG12	YBR217W	RRM3	P38766	723 aa		6.31	□□□□□ -1.4

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms