RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W PEX28P38848 579 aa6.54□□□□□ -1.36
SHP1YBL058W SLK19Q08581 821 aaKnown RBP6.54□□□□□ -1.36
SHP1YBL058W PKH2Q12236 1081 aaKnown RBP6.54□□□□□ -1.36
SHP1YBL058W RRD2Q12461 358 aa6.54□□□□□ -1.36
SHP1YBL058W BEM2P39960 2167 aaKnown RBP6.53□□□□□ -1.36
SHP1YBL058W COX4P04037 155 aa6.53□□□□□ -1.36
SHP1YBL058W TOM70P07213 617 aaKnown RBP6.53□□□□□ -1.36
SHP1YBL058W RGR1P19263 1082 aa6.53□□□□□ -1.36
SHP1YBL058W RSA4P25382 515 aaKnown RBP6.53□□□□□ -1.36
SHP1YBL058W ATG19P35193 415 aa6.53□□□□□ -1.36
SHP1YBL058W HXT5P38695 592 aa6.53□□□□□ -1.36
SHP1YBL058W ARP1P38696 384 aa6.53□□□□□ -1.36
SHP1YBL058W RIM4P38741 713 aa6.53□□□□□ -1.36
SHP1YBL058W STT3P39007 718 aaKnown RBP6.53□□□□□ -1.36
SHP1YBL058W MVP1P40959 511 aaKnown RBP6.53□□□□□ -1.36
SHP1YBL058W MNP1P53163 194 aaPredicted RBP6.53□□□□□ -1.36
SHP1YBL058W BIO5P53744 561 aaKnown RBP6.53□□□□□ -1.36
SHP1YBL058W YLH47Q06493 454 aa6.53□□□□□ -1.36
SHP1YBL058W CDC73Q06697 393 aa6.53□□□□□ -1.36
SHP1YBL058W SDH5Q08230 162 aa6.53□□□□□ -1.36
SHP1YBL058W RPS9AO13516 197 aaKnown RBP6.52□□□□□ -1.37
SHP1YBL058W TCP1P12612 559 aaKnown RBP6.52□□□□□ -1.37
SHP1YBL058W CBP3P21560 335 aa6.52□□□□□ -1.37
SHP1YBL058W RPT1P33299 467 aaKnown RBP6.52□□□□□ -1.37
SHP1YBL058W HEL1P36113 551 aa6.52□□□□□ -1.37
SHP1YBL058W MRX3P38172 270 aa6.52□□□□□ -1.37
SHP1YBL058W RPN3P40016 523 aaKnown RBP6.52□□□□□ -1.37
SHP1YBL058W RPL34BP40525 121 aaKnown RBP6.52□□□□□ -1.37
SHP1YBL058W BFA1P47113 574 aa6.52□□□□□ -1.37
SHP1YBL058W YNL146WP53906 100 aa6.52□□□□□ -1.37
SHP1YBL058W PML39Q03760 334 aa6.52□□□□□ -1.37
SHP1YBL058W FUS2Q05670 677 aa6.52□□□□□ -1.37
SHP1YBL058W YLR407WQ06070 228 aa6.52□□□□□ -1.37
SHP1YBL058W YPR109WQ06104 294 aa6.52□□□□□ -1.37
SHP1YBL058W IES4Q08561 116 aa6.52□□□□□ -1.37
SHP1YBL058W ZPS1Q12512 249 aa6.52□□□□□ -1.37
SHP1YBL058W TUF1P02992 437 aaKnown RBP6.51□□□□□ -1.37
SHP1YBL058W CIT2P08679 460 aa6.51□□□□□ -1.37
SHP1YBL058W PUP3P25451 205 aaKnown RBP6.51□□□□□ -1.37
SHP1YBL058W COT1P32798 439 aa6.51□□□□□ -1.37
SHP1YBL058W VID24P38263 362 aa6.51□□□□□ -1.37
SHP1YBL058W PCM1P38628 557 aaKnown RBP6.51□□□□□ -1.37
SHP1YBL058W PIH1P38768 344 aa6.51□□□□□ -1.37
SHP1YBL058W LSB6P42951 607 aa6.51□□□□□ -1.37
SHP1YBL058W ROG3P43602 733 aa6.51□□□□□ -1.37
SHP1YBL058W ENT3P47160 408 aa6.51□□□□□ -1.37
SHP1YBL058W RTT102P53330 157 aa6.51□□□□□ -1.37
SHP1YBL058W NCS2P53923 493 aaPredicted RBP6.51□□□□□ -1.37
SHP1YBL058W ARK1P53974 638 aa6.51□□□□□ -1.37
SHP1YBL058W ESC8Q08119 714 aa6.51□□□□□ -1.37
SHP1YBL058W SMC6Q12749 1114 aa6.51□□□□□ -1.37
SHP1YBL058W LAA1P39526 2014 aa6.5□□□□□ -1.37
SHP1YBL058W FMP27Q06179 2628 aa6.5□□□□□ -1.37
SHP1YBL058W CAN1P04817 590 aa6.5□□□□□ -1.37
SHP1YBL058W HAP2P06774 265 aa6.5□□□□□ -1.37
SHP1YBL058W ATP1P07251 545 aaKnown RBP6.5□□□□□ -1.37
SHP1YBL058W SPE1P08432 466 aa6.5□□□□□ -1.37
SHP1YBL058W HMG2P12684 1045 aa6.5□□□□□ -1.37
SHP1YBL058W RAD27P26793 382 aa6.5□□□□□ -1.37
SHP1YBL058W MRF1P30775 413 aaPredicted RBP6.5□□□□□ -1.37
SHP1YBL058W VPH1P32563 840 aaKnown RBP6.5□□□□□ -1.37
SHP1YBL058W SKG6P32900 734 aaPredicted RBP6.5□□□□□ -1.37
SHP1YBL058W HMT1P38074 348 aa6.5□□□□□ -1.37
SHP1YBL058W YGR153WP48238 217 aa6.5□□□□□ -1.37
SHP1YBL058W SDA1P53313 767 aaKnown RBP6.5□□□□□ -1.37
SHP1YBL058W YML083CQ04526 418 aa6.5□□□□□ -1.37
SHP1YBL058W ECM7Q06200 448 aa6.5□□□□□ -1.37
SHP1YBL058W GET3Q12154 354 aaKnown RBP6.5□□□□□ -1.37
SHP1YBL058W OSW2Q12202 724 aa6.5□□□□□ -1.37
SHP1YBL058W HSP82P02829 709 aaKnown RBP6.49□□□□□ -1.37
SHP1YBL058W HXK1P04806 485 aaKnown RBP6.49□□□□□ -1.37
SHP1YBL058W DBP5P20449 482 aaKnown RBP6.49□□□□□ -1.37
SHP1YBL058W MID1P41821 548 aa6.49□□□□□ -1.37
SHP1YBL058W CUL3P53202 744 aa6.49□□□□□ -1.37
SHP1YBL058W ENV11P53246 860 aa6.49□□□□□ -1.37
SHP1YBL058W CAF130P53280 1122 aaPredicted RBP6.49□□□□□ -1.37
SHP1YBL058W ELP4Q02884 456 aaKnown RBP6.49□□□□□ -1.37
SHP1YBL058W ADY4Q05955 493 aa6.49□□□□□ -1.37
SHP1YBL058W PLP2Q12017 286 aa6.49□□□□□ -1.37
SHP1YBL058W DCS2Q12123 353 aa6.49□□□□□ -1.37
SHP1YBL058W TIP41Q12199 356 aa6.49□□□□□ -1.37
SHP1YBL058W NUM1Q00402 2748 aa6.49□□□□□ -1.37
SHP1YBL058W TEL1P38110 2787 aa6.49□□□□□ -1.37
SHP1YBL058W YEL076C-AP0CX16 216 aa6.48□□□□□ -1.37
SHP1YBL058W YLR464WP0CX17 216 aa6.48□□□□□ -1.37
SHP1YBL058W FRS2P15625 503 aaKnown RBP6.48□□□□□ -1.37
SHP1YBL058W CYS3P31373 394 aaKnown RBP6.48□□□□□ -1.37
SHP1YBL058W VPS35P34110 944 aa6.48□□□□□ -1.37
SHP1YBL058W COY1P34237 679 aa6.48□□□□□ -1.37
SHP1YBL058W MNR2P35724 969 aa6.48□□□□□ -1.37
SHP1YBL058W PGM2P37012 569 aaKnown RBP6.48□□□□□ -1.37
SHP1YBL058W YBL036CP38197 257 aa6.48□□□□□ -1.37
SHP1YBL058W SIP3P38717 1229 aa6.48□□□□□ -1.37
SHP1YBL058W YEL076CP39971 216 aa6.48□□□□□ -1.37
SHP1YBL058W YER186CP40101 306 aa6.48□□□□□ -1.37
SHP1YBL058W BUD6P41697 788 aa6.48□□□□□ -1.37
SHP1YBL058W STB4P50104 949 aa6.48□□□□□ -1.37
SHP1YBL058W NUT1P53114 1132 aa6.48□□□□□ -1.37
SHP1YBL058W CBK1P53894 756 aa6.48□□□□□ -1.37
SHP1YBL058W NIS1P53939 407 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms