RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 AKAP2Q9Y2D5 859 aa18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 SSRP1Q08945 709 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 TOP1P11387 765 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 SLC5A1P13866 664 aa18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 PDE3AQ14432 1141 aa18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 CALML4Q96GE6 196 aa18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 FAM184BQ9ULE4 1060 aa18.7■□□□□ 0.58
CACNA1A-258ENST00000638029 CALM1P0DP23 149 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 CALM2P0DP24 149 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 CALM3P0DP25 149 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 ZBTB16Q05516 673 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 CATIPQ7Z7H3 387 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 HLA-DOAP06340 250 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 PPARDQ03181 441 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 FAM160A1Q05DH4 1040 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 PTPN14Q15678 1187 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 GINS2Q9Y248 185 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 ESPNB1AK53 854 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 CRCPO75575 148 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 CUL4BQ13620 913 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 HSP90AA4PQ58FG1 418 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 DDX46Q7L014 1031 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 CLSTN2Q9H4D0 955 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 EEF2P13639 858 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 LMOD1P29536 600 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 IFIT5Q13325 482 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 OGFOD1Q8N543 542 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 AFAP1Q8N556 730 aa18.69■□□□□ 0.58
CACNA1A-258ENST00000638029 TSPY2A6NKD2 308 aa18.68■□□□□ 0.58
CACNA1A-258ENST00000638029 ARID5AQ03989 594 aa18.68■□□□□ 0.58
CACNA1A-258ENST00000638029 SEPT6Q14141 434 aa18.68■□□□□ 0.58
CACNA1A-258ENST00000638029 ANAPC4Q9UJX5 808 aa18.68■□□□□ 0.58
CACNA1A-258ENST00000638029 CCDC194A0A1B0GVG4 234 aa18.68■□□□□ 0.58
CACNA1A-258ENST00000638029 CEP135Q66GS9 1140 aa18.68■□□□□ 0.58
CACNA1A-258ENST00000638029 A0A087WZG4 1122 aa18.68■□□□□ 0.58
CACNA1A-258ENST00000638029 CCDC50Q8IVM0 306 aa18.68■□□□□ 0.58
CACNA1A-258ENST00000638029 IFIT3O14879 490 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-258ENST00000638029 C8orf37Q96NL8 207 aa18.67■□□□□ 0.58
CACNA1A-258ENST00000638029 USO1O60763 962 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-258ENST00000638029 KRT13P13646 458 aa18.67■□□□□ 0.58
CACNA1A-258ENST00000638029 GTF3C6Q969F1 213 aa18.67■□□□□ 0.58
CACNA1A-258ENST00000638029 PPP2R5DQ14738 602 aa18.67■□□□□ 0.58
CACNA1A-258ENST00000638029 GTPBP4Q9BZE4 634 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-258ENST00000638029 RNF34Q969K3 372 aa18.67■□□□□ 0.58
CACNA1A-258ENST00000638029 MAP3K12Q12852 859 aa18.67■□□□□ 0.58
CACNA1A-258ENST00000638029 GOLGA8AA7E2F4 631 aa18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 GOLGA8BA8MQT2 603 aa18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 ZSCAN31Q96LW9 406 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 LRRC9Q6ZRR7 1453 aa18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 STK25O00506 426 aa18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 GNL1P36915 607 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 CWC25Q9NXE8 425 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 PPME1Q9Y570 386 aa18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 ZNF213O14771 459 aa18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 NOL3O60936 208 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 ATAD2BQ9ULI0 1458 aa18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 CEP83Q9Y592 693 aa18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 TTC21AQ8NDW8 1320 aa18.66■□□□□ 0.58
CACNA1A-258ENST00000638029 RIOK3O14730 519 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 TBC1D5Q92609 795 aa18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 PPP6R1Q9UPN7 881 aa18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 MVPQ14764 893 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 STX8Q9UNK0 236 aa18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 MAP3K11Q16584 847 aa18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 HYPKQ9NX55 129 aa18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 ZBTB24O43167 697 aaPredicted RBP18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 PDE1CQ14123 709 aaPredicted RBP18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 WDR63Q8IWG1 891 aa18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 CNNM3Q8NE01 707 aa18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 KAT14Q9H8E8 782 aa18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 HECW1Q76N89 1606 aa18.65■□□□□ 0.58
CACNA1A-258ENST00000638029 SPECC1LQ69YQ0 1117 aa18.64■□□□□ 0.58
CACNA1A-258ENST00000638029 LRRC43Q8N309 656 aa18.64■□□□□ 0.58
CACNA1A-258ENST00000638029 CCT6BQ92526 530 aa18.64■□□□□ 0.58
CACNA1A-258ENST00000638029 RSPH3Q86UC2 560 aa18.64■□□□□ 0.57
CACNA1A-258ENST00000638029 PSMD6Q15008 389 aa18.64■□□□□ 0.57
CACNA1A-258ENST00000638029 CCDC89Q8N998 374 aa18.64■□□□□ 0.57
CACNA1A-258ENST00000638029 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-258ENST00000638029 SELENOSQ9BQE4 189 aa18.64■□□□□ 0.57
CACNA1A-258ENST00000638029 NCOA2Q15596 1464 aa18.64■□□□□ 0.57
CACNA1A-258ENST00000638029 CCDC196A0A1B0GTZ2 297 aa18.64■□□□□ 0.57
CACNA1A-258ENST00000638029 MRRFQ96E11 262 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-258ENST00000638029 C16orf45Q96MC5 204 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-258ENST00000638029 UAP1Q16222 522 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-258ENST00000638029 RIMBP2O15034 1052 aa18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 HARSP12081 509 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 GBP3Q9H0R5 595 aa18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 SMARCA5O60264 1052 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 ERICH3Q5RHP9 1530 aa18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 MYCP01106 439 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 ARID4AP29374 1257 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 PRKG1Q13976 671 aa18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 KIF18AQ8NI77 898 aa18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 KIF4AO95239 1232 aa18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 TTC30BQ8N4P2 665 aa18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 ANO3Q9BYT9 981 aa18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 FEZ2Q9UHY8 353 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-258ENST00000638029 ERBINQ96RT1 1412 aa18.62■□□□□ 0.57
CACNA1A-258ENST00000638029 SFPQP23246 707 aaKnown RBP eCLIP18.62■□□□□ 0.57
CACNA1A-258ENST00000638029 TXNDC16Q9P2K2 825 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms