RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 STAP2Q9UGK3 403 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 SLIT2O94813 1529 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 SRGAP3O43295 1099 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 SURF6O75683 361 aaKnown RBP8.76□□□□□ -1.01
BRCA1-230ENST00000634433 PROSER3Q2NL68 480 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 ZNF662Q6ZS27 426 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 HSCBQ8IWL3 235 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 GJD4Q96KN9 370 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-230ENST00000634433 PLCD4Q9BRC7 762 aa8.76□□□□□ -1.01
BRCA1-230ENST00000634433 UTYO14607 1347 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 PRAMEF22A3QJZ6 481 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 NBPF7P0C2Y1 421 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-230ENST00000634433 SDSP20132 328 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 MX1P20591 662 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 AIMP1Q12904 312 aaKnown RBP8.75□□□□□ -1.01
BRCA1-230ENST00000634433 FOXD4L6Q3SYB3 417 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-230ENST00000634433 FOXD4L3Q6VB84 417 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-230ENST00000634433 ERC1Q8IUD2 1116 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 SNX21Q969T3 373 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 TBC1D2Q9BYX2 928 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 STRN4Q9NRL3 753 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 GRM8O00222 908 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 REC8O95072 547 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 ANKRD13DQ6ZTN6 518 aa8.75□□□□□ -1.01
BRCA1-230ENST00000634433 METTL22Q9BUU2 404 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-230ENST00000634433 DISP2A7MBM2 1401 aa8.74□□□□□ -1.01
BRCA1-230ENST00000634433 COPS6Q7L5N1 327 aa8.74□□□□□ -1.01
BRCA1-230ENST00000634433 OTUD7AQ8TE49 926 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-230ENST00000634433 XAGE3Q8WTP9 111 aa8.74□□□□□ -1.01
BRCA1-230ENST00000634433 POM121Q96HA1 1249 aa8.74□□□□□ -1.01
BRCA1-230ENST00000634433 SALL3Q9BXA9 1300 aa8.74□□□□□ -1.01
BRCA1-230ENST00000634433 MYL6BP14649 208 aa8.74□□□□□ -1.01
BRCA1-230ENST00000634433 RHPN1Q8TCX5 695 aa8.74□□□□□ -1.01
BRCA1-230ENST00000634433 SGSM3Q96HU1 749 aa8.74□□□□□ -1.01
BRCA1-230ENST00000634433 KCNG1Q9UIX4 513 aa8.74□□□□□ -1.01
BRCA1-230ENST00000634433 USP16Q9Y5T5 823 aa8.74□□□□□ -1.01
BRCA1-230ENST00000634433 OS9Q13438 667 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-230ENST00000634433 NOL8Q76FK4 1167 aaKnown RBP8.73□□□□□ -1.01
BRCA1-230ENST00000634433 UNC5CLQ8IV45 518 aa8.73□□□□□ -1.01
BRCA1-230ENST00000634433 DDX54Q8TDD1 881 aaKnown RBP8.73□□□□□ -1.01
BRCA1-230ENST00000634433 ABCA3Q99758 1704 aa8.73□□□□□ -1.01
BRCA1-230ENST00000634433 PLCH1Q4KWH8 1693 aa8.73□□□□□ -1.01
BRCA1-230ENST00000634433 ERC2O15083 957 aa8.73□□□□□ -1.01
BRCA1-230ENST00000634433 ADAMTS2O95450 1211 aa8.73□□□□□ -1.01
BRCA1-230ENST00000634433 ANAPC15P60006 121 aa8.73□□□□□ -1.01
BRCA1-230ENST00000634433 TEX13AQ9BXU3 409 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-230ENST00000634433 IGSF5Q9NSI5 407 aa8.73□□□□□ -1.01
BRCA1-230ENST00000634433 NEURL1BA8MQ27 555 aa8.72□□□□□ -1.01
BRCA1-230ENST00000634433 CWF19L2Q2TBE0 894 aaKnown RBP8.72□□□□□ -1.01
BRCA1-230ENST00000634433 PLBD2Q8NHP8 589 aa8.72□□□□□ -1.01
BRCA1-230ENST00000634433 GPATCH3Q96I76 525 aa8.72□□□□□ -1.01
BRCA1-230ENST00000634433 USP26Q9BXU7 913 aa8.72□□□□□ -1.01
BRCA1-230ENST00000634433 BTG4Q9NY30 223 aa8.72□□□□□ -1.01
BRCA1-230ENST00000634433 BAG6P46379 1132 aa8.72□□□□□ -1.01
BRCA1-230ENST00000634433 G3BP1Q13283 466 aaKnown RBP eCLIP8.72□□□□□ -1.01
BRCA1-230ENST00000634433 GCKRQ14397 625 aa8.72□□□□□ -1.01
BRCA1-230ENST00000634433 RABEP1Q15276 862 aa8.72□□□□□ -1.01
BRCA1-230ENST00000634433 CLASRPQ8N2M8 674 aaKnown RBP8.72□□□□□ -1.01
BRCA1-230ENST00000634433 MYD88Q99836 296 aa8.72□□□□□ -1.01
BRCA1-230ENST00000634433 CIZ1Q9ULV3 898 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-230ENST00000634433 TRIM6-TRIM34B2RNG4 842 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 EPB41L2O43491 1005 aaKnown RBP8.71□□□□□ -1.02
BRCA1-230ENST00000634433 IGKV5-2P06315 115 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 MKRN4PQ13434 485 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-230ENST00000634433 NFKBIBQ15653 356 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 LRP10Q7Z4F1 713 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 TMOD3Q9NYL9 352 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 RIPOR2Q9Y4F9 1068 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 TTC41PQ6P2S7 1318 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 MARCH6O60337 910 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 MCCP23508 829 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 VPS72Q15906 364 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 SUCLG2Q96I99 432 aa8.71□□□□□ -1.02
BRCA1-230ENST00000634433 CDCA7Q9BWT1 371 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-230ENST00000634433 COL15A1P39059 1388 aa8.7□□□□□ -1.02
BRCA1-230ENST00000634433 USP42Q9H9J4 1324 aaKnown RBP8.7□□□□□ -1.02
BRCA1-230ENST00000634433 POTEDQ86YR6 584 aa8.7□□□□□ -1.02
BRCA1-230ENST00000634433 RILPL2Q969X0 211 aa8.7□□□□□ -1.02
BRCA1-230ENST00000634433 IL1RAPL2Q9NP60 686 aa8.7□□□□□ -1.02
BRCA1-230ENST00000634433 NRAPQ86VF7 1730 aa8.7□□□□□ -1.02
BRCA1-230ENST00000634433 C5P01031 1676 aa8.7□□□□□ -1.02
BRCA1-230ENST00000634433 COL14A1Q05707 1796 aaKnown RBP8.7□□□□□ -1.02
BRCA1-230ENST00000634433 TNS1Q9HBL0 1735 aaKnown RBP8.7□□□□□ -1.02
BRCA1-230ENST00000634433 GLRX3O76003 335 aaKnown RBP8.7□□□□□ -1.02
BRCA1-230ENST00000634433 FOSBP53539 338 aa8.7□□□□□ -1.02
BRCA1-230ENST00000634433 CNTROBQ8N137 903 aa8.7□□□□□ -1.02
BRCA1-230ENST00000634433 BICC1Q9H694 974 aaKnown RBP8.7□□□□□ -1.02
BRCA1-230ENST00000634433 CHMP5Q9NZZ3 219 aa8.7□□□□□ -1.02
BRCA1-230ENST00000634433 EXOC5O00471 708 aa8.69□□□□□ -1.02
BRCA1-230ENST00000634433 IFIT2P09913 472 aaKnown RBP8.69□□□□□ -1.02
BRCA1-230ENST00000634433 KIF2CQ99661 725 aa8.69□□□□□ -1.02
BRCA1-230ENST00000634433 SLKQ9H2G2 1235 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-230ENST00000634433 ANTXR1Q9H6X2 564 aa8.69□□□□□ -1.02
BRCA1-230ENST00000634433 RREB1Q92766 1687 aa8.69□□□□□ -1.02
BRCA1-230ENST00000634433 CHMLP26374 656 aa8.69□□□□□ -1.02
BRCA1-230ENST00000634433 NUTM1Q86Y26 1132 aa8.69□□□□□ -1.02
BRCA1-230ENST00000634433 ESYT1Q9BSJ8 1104 aa8.69□□□□□ -1.02
BRCA1-230ENST00000634433 KIAA1522Q9P206 1035 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-230ENST00000634433 TNS2Q63HR2 1409 aa8.68□□□□□ -1.02
BRCA1-230ENST00000634433 LAMB4A4D0S4 1761 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms