RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 IFT57Q9NWB7 429 aa27.38■■□□□ 1.97
PMPCA-212ENST00000622209 CCDC88AQ3V6T2 1871 aa27.38■■□□□ 1.97
PMPCA-212ENST00000622209 ERBB4Q15303 1308 aa27.38■■□□□ 1.97
PMPCA-212ENST00000622209 GNAI1P63096 354 aa27.37■■□□□ 1.97
PMPCA-212ENST00000622209 PROSER3Q2NL68 480 aa27.37■■□□□ 1.97
PMPCA-212ENST00000622209 GIGYF2Q6Y7W6 1299 aaKnown RBP27.37■■□□□ 1.97
PMPCA-212ENST00000622209 NECTIN2Q92692 538 aa27.37■■□□□ 1.97
PMPCA-212ENST00000622209 LAMB4A4D0S4 1761 aa27.37■■□□□ 1.97
PMPCA-212ENST00000622209 WDR90Q96KV7 1748 aa27.36■■□□□ 1.97
PMPCA-212ENST00000622209 SYNE4Q8N205 404 aa27.36■■□□□ 1.97
PMPCA-212ENST00000622209 RPGRQ92834 1020 aaKnown RBP27.36■■□□□ 1.97
PMPCA-212ENST00000622209 POTEIP0CG38 1075 aa27.35■■□□□ 1.97
PMPCA-212ENST00000622209 POTEJP0CG39 1038 aa27.35■■□□□ 1.97
PMPCA-212ENST00000622209 LRP10Q7Z4F1 713 aa27.35■■□□□ 1.97
PMPCA-212ENST00000622209 NTSR2O95665 410 aa27.33■■□□□ 1.97
PMPCA-212ENST00000622209 CHADLQ6NUI6 762 aa27.33■■□□□ 1.97
PMPCA-212ENST00000622209 JMYQ8N9B5 988 aa27.33■■□□□ 1.97
PMPCA-212ENST00000622209 MBIPQ9NS73 344 aa27.33■■□□□ 1.97
PMPCA-212ENST00000622209 ZNF541Q9H0D2 1346 aa27.33■■□□□ 1.97
PMPCA-212ENST00000622209 TCERG1O14776 1098 aaKnown RBP27.32■■□□□ 1.96
PMPCA-212ENST00000622209 IARSP41252 1262 aaKnown RBP27.32■■□□□ 1.96
PMPCA-212ENST00000622209 C3orf67Q6ZVT6 689 aa27.32■■□□□ 1.96
PMPCA-212ENST00000622209 PPP1R42Q7Z4L9 355 aa27.32■■□□□ 1.96
PMPCA-212ENST00000622209 IL16Q14005 1332 aa27.32■■□□□ 1.96
PMPCA-212ENST00000622209 CACNA1SQ13698 1873 aa27.32■■□□□ 1.96
PMPCA-212ENST00000622209 HOXA10P31260 410 aaPredicted RBP27.31■■□□□ 1.96
PMPCA-212ENST00000622209 AIMP1Q12904 312 aaKnown RBP27.31■■□□□ 1.96
PMPCA-212ENST00000622209 KRT24Q2M2I5 525 aa27.31■■□□□ 1.96
PMPCA-212ENST00000622209 PARP10Q53GL7 1025 aa27.31■■□□□ 1.96
PMPCA-212ENST00000622209 RBM17Q96I25 401 aaKnown RBP27.31■■□□□ 1.96
PMPCA-212ENST00000622209 IQCA1LA6NCM1 817 aa27.3■■□□□ 1.96
PMPCA-212ENST00000622209 COPS6Q7L5N1 327 aa27.3■■□□□ 1.96
PMPCA-212ENST00000622209 WDR63Q8IWG1 891 aa27.3■■□□□ 1.96
PMPCA-212ENST00000622209 L3MBTL3Q96JM7 780 aaPredicted RBP27.3■■□□□ 1.96
PMPCA-212ENST00000622209 SALL2Q9Y467 1007 aaPredicted RBP27.3■■□□□ 1.96
PMPCA-212ENST00000622209 IBTKQ9P2D0 1353 aaPredicted RBP27.3■■□□□ 1.96
PMPCA-212ENST00000622209 ARFGEF2Q9Y6D5 1785 aa27.3■■□□□ 1.96
PMPCA-212ENST00000622209 SLC51AQ86UW1 340 aa27.29■■□□□ 1.96
PMPCA-212ENST00000622209 XAGE3Q8WTP9 111 aa27.29■■□□□ 1.96
PMPCA-212ENST00000622209 UTP14AQ9BVJ6 771 aaKnown RBP27.29■■□□□ 1.96
PMPCA-212ENST00000622209 TAF1DQ9H5J8 278 aaPredicted RBP27.29■■□□□ 1.96
PMPCA-212ENST00000622209 CC2D2BQ6DHV5 1058 aa27.28■■□□□ 1.96
PMPCA-212ENST00000622209 CRAMP1Q96RY5 1269 aa27.28■■□□□ 1.96
PMPCA-212ENST00000622209 PSMD1Q99460 953 aa27.28■■□□□ 1.96
PMPCA-212ENST00000622209 DICER1Q9UPY3 1922 aaKnown RBP27.28■■□□□ 1.96
PMPCA-212ENST00000622209 HOXB7P09629 217 aa27.27■■□□□ 1.96
PMPCA-212ENST00000622209 NLRP3Q96P20 1036 aa27.27■■□□□ 1.96
PMPCA-212ENST00000622209 FZD9O00144 591 aa27.26■■□□□ 1.95
PMPCA-212ENST00000622209 PPEF1O14829 653 aaPredicted RBP27.26■■□□□ 1.95
PMPCA-212ENST00000622209 JDP2Q8WYK2 163 aa27.26■■□□□ 1.95
PMPCA-212ENST00000622209 RIC1Q4ADV7 1423 aa27.25■■□□□ 1.95
PMPCA-212ENST00000622209 NUP98P52948 1817 aa27.25■■□□□ 1.95
PMPCA-212ENST00000622209 EAPPQ56P03 285 aaPredicted RBP27.25■■□□□ 1.95
PMPCA-212ENST00000622209 HACL1Q9UJ83 578 aa27.25■■□□□ 1.95
PMPCA-212ENST00000622209 SLC10A5Q5PT55 438 aa27.24■■□□□ 1.95
PMPCA-212ENST00000622209 LDHDQ86WU2 507 aa27.24■■□□□ 1.95
PMPCA-212ENST00000622209 DDX21Q9NR30 783 aaKnown RBP eCLIP27.24■■□□□ 1.95
PMPCA-212ENST00000622209 DUSP27Q5VZP5 1158 aa27.23■■□□□ 1.95
PMPCA-212ENST00000622209 NLRP10Q86W26 655 aa27.23■■□□□ 1.95
PMPCA-212ENST00000622209 ZNF428Q96B54 188 aa27.23■■□□□ 1.95
PMPCA-212ENST00000622209 CLEC11AQ9Y240 323 aa27.23■■□□□ 1.95
PMPCA-212ENST00000622209 SNED1Q8TER0 1413 aa27.23■■□□□ 1.95
PMPCA-212ENST00000622209 HCLS1P14317 486 aaPredicted RBP27.22■■□□□ 1.95
PMPCA-212ENST00000622209 HSP90AB3PQ58FF7 597 aa27.22■■□□□ 1.95
PMPCA-212ENST00000622209 CHPF2Q9P2E5 772 aa27.22■■□□□ 1.95
PMPCA-212ENST00000622209 GJA3Q9Y6H8 435 aa27.22■■□□□ 1.95
PMPCA-212ENST00000622209 PCNTO95613 3336 aa27.22■■□□□ 1.95
PMPCA-212ENST00000622209 RNF123Q5XPI4 1314 aa27.21■■□□□ 1.95
PMPCA-212ENST00000622209 EPHX2P34913 555 aa27.21■■□□□ 1.95
PMPCA-212ENST00000622209 TCIRG1Q13488 830 aa27.21■■□□□ 1.95
PMPCA-212ENST00000622209 GRIPAP1Q4V328 841 aa27.21■■□□□ 1.95
PMPCA-212ENST00000622209 GPC2Q8N158 579 aa27.21■■□□□ 1.95
PMPCA-212ENST00000622209 LARGE2Q8N3Y3 721 aa27.21■■□□□ 1.95
PMPCA-212ENST00000622209 EIF6P56537 245 aaKnown RBP27.2■■□□□ 1.94
PMPCA-212ENST00000622209 HDGFL1Q5TGJ6 251 aa27.2■■□□□ 1.94
PMPCA-212ENST00000622209 TMX4Q9H1E5 349 aaPredicted RBP27.2■■□□□ 1.94
PMPCA-212ENST00000622209 CREBZFQ9NS37 354 aa27.2■■□□□ 1.94
PMPCA-212ENST00000622209 TRMT112Q9UI30 125 aaKnown RBP27.2■■□□□ 1.94
PMPCA-212ENST00000622209 TSR2Q969E8 191 aaKnown RBP27.19■■□□□ 1.94
PMPCA-212ENST00000622209 CHMP4AQ9BY43 222 aa27.19■■□□□ 1.94
PMPCA-212ENST00000622209 MKRN1Q9UHC7 482 aaKnown RBP27.19■■□□□ 1.94
PMPCA-212ENST00000622209 ZNF521Q96K83 1311 aa27.18■■□□□ 1.94
PMPCA-212ENST00000622209 C8orf58Q8NAV2 365 aa27.18■■□□□ 1.94
PMPCA-212ENST00000622209 ATP6V0A2Q9Y487 856 aa27.18■■□□□ 1.94
PMPCA-212ENST00000622209 ABCC4O15439 1325 aa27.17■■□□□ 1.94
PMPCA-212ENST00000622209 COL13A1Q5TAT6 717 aaPredicted RBP27.17■■□□□ 1.94
PMPCA-212ENST00000622209 PNMA8AQ86V59 439 aaPredicted RBP27.16■■□□□ 1.94
PMPCA-212ENST00000622209 PASKQ96RG2 1323 aa27.16■■□□□ 1.94
PMPCA-212ENST00000622209 ELL2O00472 640 aaPredicted RBP27.15■■□□□ 1.94
PMPCA-212ENST00000622209 PPIP5K2O43314 1243 aa27.15■■□□□ 1.94
PMPCA-212ENST00000622209 ITGBL1O95965 494 aaPredicted RBP27.15■■□□□ 1.94
PMPCA-212ENST00000622209 MYH16Q9H6N6 1097 aa27.15■■□□□ 1.94
PMPCA-212ENST00000622209 SH3TC1Q8TE82 1336 aa27.15■■□□□ 1.94
PMPCA-212ENST00000622209 FANCIQ9NVI1 1328 aa27.15■■□□□ 1.94
PMPCA-212ENST00000622209 COL4A5P29400 1685 aa27.14■■□□□ 1.94
PMPCA-212ENST00000622209 BBOX1O75936 387 aa27.14■■□□□ 1.94
PMPCA-212ENST00000622209 HSPA1AP0DMV8 641 aaKnown RBP27.14■■□□□ 1.94
PMPCA-212ENST00000622209 HSPA1BP0DMV9 641 aaKnown RBP27.14■■□□□ 1.94
PMPCA-212ENST00000622209 GOLGA2Q08379 1002 aa27.14■■□□□ 1.94
PMPCA-212ENST00000622209 AOC3Q16853 763 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms