RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 RIOK3O14730 519 aaKnown RBP18.77■□□□□ 0.6
NPHP4-211ENST00000622020 NECTIN1Q15223 517 aa18.77■□□□□ 0.6
NPHP4-211ENST00000622020 HSP90AB4PQ58FF6 505 aa18.77■□□□□ 0.6
NPHP4-211ENST00000622020 ZNF530Q6P9A1 599 aaPredicted RBP18.77■□□□□ 0.6
NPHP4-211ENST00000622020 LARP1Q6PKG0 1096 aaKnown RBP18.77■□□□□ 0.6
NPHP4-211ENST00000622020 NUP62CLQ9H1M0 184 aa18.77■□□□□ 0.6
NPHP4-211ENST00000622020 DIP2BQ9P265 1576 aa18.77■□□□□ 0.59
NPHP4-211ENST00000622020 KRT85P78386 507 aa18.76■□□□□ 0.59
NPHP4-211ENST00000622020 KIAA1524Q8TCG1 905 aa18.76■□□□□ 0.59
NPHP4-211ENST00000622020 XRN1Q8IZH2 1706 aaKnown RBP18.76■□□□□ 0.59
NPHP4-211ENST00000622020 IGSF3O75054 1194 aa18.76■□□□□ 0.59
NPHP4-211ENST00000622020 ANO6Q4KMQ2 910 aa18.76■□□□□ 0.59
NPHP4-211ENST00000622020 CCDC186Q7Z3E2 898 aa18.76■□□□□ 0.59
NPHP4-211ENST00000622020 PRIMPOLQ96LW4 560 aa18.76■□□□□ 0.59
NPHP4-211ENST00000622020 CCDC94Q9BW85 323 aaPredicted RBP18.76■□□□□ 0.59
NPHP4-211ENST00000622020 A0A0U1RQG5 324 aaPredicted RBP18.76■□□□□ 0.59
NPHP4-211ENST00000622020 HMGN5P82970 282 aaKnown RBP18.76■□□□□ 0.59
NPHP4-211ENST00000622020 MAP3K11Q16584 847 aa18.76■□□□□ 0.59
NPHP4-211ENST00000622020 C16orf45Q96MC5 204 aaPredicted RBP18.76■□□□□ 0.59
NPHP4-211ENST00000622020 LRRC2Q9BYS8 371 aa18.76■□□□□ 0.59
NPHP4-211ENST00000622020 TNMDQ9H2S6 317 aa18.76■□□□□ 0.59
NPHP4-211ENST00000622020 ADCY9O60503 1353 aa18.76■□□□□ 0.59
NPHP4-211ENST00000622020 A0A087WWV3 80 aa18.75■□□□□ 0.59
NPHP4-211ENST00000622020 TYRO3Q06418 890 aa18.75■□□□□ 0.59
NPHP4-211ENST00000622020 FBXW7Q969H0 707 aa18.75■□□□□ 0.59
NPHP4-211ENST00000622020 GPATCH3Q96I76 525 aa18.75■□□□□ 0.59
NPHP4-211ENST00000622020 SLC27A2O14975 620 aa18.75■□□□□ 0.59
NPHP4-211ENST00000622020 PIP4K2AP48426 406 aaPredicted RBP18.75■□□□□ 0.59
NPHP4-211ENST00000622020 ATP2B3Q16720 1220 aa18.75■□□□□ 0.59
NPHP4-211ENST00000622020 SPATA32Q96LK8 384 aa18.75■□□□□ 0.59
NPHP4-211ENST00000622020 TRIM5Q9C035 493 aa18.75■□□□□ 0.59
NPHP4-211ENST00000622020 TTC41PQ6P2S7 1318 aa18.75■□□□□ 0.59
NPHP4-211ENST00000622020 TUBGCP6Q96RT7 1819 aa18.75■□□□□ 0.59
NPHP4-211ENST00000622020 JAK2O60674 1132 aa18.74■□□□□ 0.59
NPHP4-211ENST00000622020 SASH1O94885 1247 aa18.74■□□□□ 0.59
NPHP4-211ENST00000622020 BLOC1S2Q6QNY1 142 aa18.74■□□□□ 0.59
NPHP4-211ENST00000622020 MTERF4Q7Z6M4 381 aaKnown RBP18.74■□□□□ 0.59
NPHP4-211ENST00000622020 ZNF589Q86UQ0 364 aaPredicted RBP18.74■□□□□ 0.59
NPHP4-211ENST00000622020 BICC1Q9H694 974 aaKnown RBP18.74■□□□□ 0.59
NPHP4-211ENST00000622020 MRVI1Q9Y6F6 885 aa18.74■□□□□ 0.59
NPHP4-211ENST00000622020 G3BP1Q13283 466 aaKnown RBP eCLIP18.74■□□□□ 0.59
NPHP4-211ENST00000622020 BICD2Q8TD16 824 aa18.74■□□□□ 0.59
NPHP4-211ENST00000622020 EVI5LQ96CN4 794 aa18.74■□□□□ 0.59
NPHP4-211ENST00000622020 SUCLG2Q96I99 432 aa18.74■□□□□ 0.59
NPHP4-211ENST00000622020 ZSCAN31Q96LW9 406 aaPredicted RBP18.74■□□□□ 0.59
NPHP4-211ENST00000622020 SH2B1Q9NRF2 756 aaPredicted RBP18.74■□□□□ 0.59
NPHP4-211ENST00000622020 KCNA6P17658 529 aa18.74■□□□□ 0.59
NPHP4-211ENST00000622020 CHAF1AQ13111 956 aaPredicted RBP18.73■□□□□ 0.59
NPHP4-211ENST00000622020 MYL6BP14649 208 aa18.73■□□□□ 0.59
NPHP4-211ENST00000622020 NR1I2O75469 434 aa18.72■□□□□ 0.59
NPHP4-211ENST00000622020 FAM200AQ8TCP9 573 aa18.72■□□□□ 0.59
NPHP4-211ENST00000622020 DNAJC25Q9H1X3 360 aa18.72■□□□□ 0.59
NPHP4-211ENST00000622020 SPTLC3Q9NUV7 552 aa18.72■□□□□ 0.59
NPHP4-211ENST00000622020 EPB41L2O43491 1005 aaKnown RBP18.72■□□□□ 0.59
NPHP4-211ENST00000622020 CBX8Q9HC52 389 aa18.72■□□□□ 0.59
NPHP4-211ENST00000622020 DBF4Q9UBU7 674 aaPredicted RBP18.72■□□□□ 0.59
NPHP4-211ENST00000622020 FAM208AQ9UK61 1670 aaKnown RBP18.71■□□□□ 0.59
NPHP4-211ENST00000622020 NAA30Q147X3 362 aaPredicted RBP18.71■□□□□ 0.59
NPHP4-211ENST00000622020 CCDC129Q6ZRS4 1044 aa18.71■□□□□ 0.59
NPHP4-211ENST00000622020 ZNF592Q92610 1267 aa18.71■□□□□ 0.59
NPHP4-211ENST00000622020 HSP90B1P14625 803 aaKnown RBP18.71■□□□□ 0.59
NPHP4-211ENST00000622020 U2AF2P26368 475 aaKnown RBP eCLIP18.71■□□□□ 0.59
NPHP4-211ENST00000622020 MAP4K1Q92918 833 aa18.71■□□□□ 0.59
NPHP4-211ENST00000622020 NAP1L2Q9ULW6 460 aaPredicted RBP18.71■□□□□ 0.59
NPHP4-211ENST00000622020 TAOK2Q9UL54 1235 aa18.71■□□□□ 0.59
NPHP4-211ENST00000622020 GOLGA6L6A8MZA4 724 aa18.7■□□□□ 0.58
NPHP4-211ENST00000622020 RGPD8O14715 1765 aaPredicted RBP18.7■□□□□ 0.58
NPHP4-211ENST00000622020 ERCC4Q92889 916 aaPredicted RBP18.7■□□□□ 0.58
NPHP4-211ENST00000622020 KIF13AQ9H1H9 1805 aa18.7■□□□□ 0.58
NPHP4-211ENST00000622020 SLC39A6Q13433 755 aa18.7■□□□□ 0.58
NPHP4-211ENST00000622020 KAZALD1Q96I82 304 aa18.7■□□□□ 0.58
NPHP4-211ENST00000622020 SEC62Q99442 399 aaKnown RBP18.7■□□□□ 0.58
NPHP4-211ENST00000622020 FTOQ9C0B1 505 aaKnown RBP eCLIP18.7■□□□□ 0.58
NPHP4-211ENST00000622020 PDCL2Q8N4E4 241 aa18.69■□□□□ 0.58
NPHP4-211ENST00000622020 AGLP35573 1532 aa18.69■□□□□ 0.58
NPHP4-211ENST00000622020 TOB2Q14106 344 aaPredicted RBP18.69■□□□□ 0.58
NPHP4-211ENST00000622020 SLFNL1Q499Z3 407 aa18.69■□□□□ 0.58
NPHP4-211ENST00000622020 FGD1P98174 961 aa18.68■□□□□ 0.58
NPHP4-211ENST00000622020 KSR2Q6VAB6 950 aa18.68■□□□□ 0.58
NPHP4-211ENST00000622020 DNAJC2Q99543 621 aaKnown RBP18.68■□□□□ 0.58
NPHP4-211ENST00000622020 TM6SF1Q9BZW5 370 aa18.68■□□□□ 0.58
NPHP4-211ENST00000622020 PSMA5P28066 241 aa18.68■□□□□ 0.58
NPHP4-211ENST00000622020 LEO1Q8WVC0 666 aaPredicted RBP18.68■□□□□ 0.58
NPHP4-211ENST00000622020 GRM8O00222 908 aa18.68■□□□□ 0.58
NPHP4-211ENST00000622020 ARID5BQ14865 1188 aa18.68■□□□□ 0.58
NPHP4-211ENST00000622020 ZNF165P49910 485 aa18.67■□□□□ 0.58
NPHP4-211ENST00000622020 C1orf141Q5JVX7 400 aa18.67■□□□□ 0.58
NPHP4-211ENST00000622020 RIC3Q7Z5B4 369 aa18.67■□□□□ 0.58
NPHP4-211ENST00000622020 PGBD1Q96JS3 809 aa18.67■□□□□ 0.58
NPHP4-211ENST00000622020 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
NPHP4-211ENST00000622020 H3BQV1 296 aa18.67■□□□□ 0.58
NPHP4-211ENST00000622020 RPS6KB1P23443 525 aa18.67■□□□□ 0.58
NPHP4-211ENST00000622020 IFFO2Q5TF58 517 aa18.67■□□□□ 0.58
NPHP4-211ENST00000622020 NALCNQ8IZF0 1738 aa18.67■□□□□ 0.58
NPHP4-211ENST00000622020 FMN2Q9NZ56 1722 aa18.67■□□□□ 0.58
NPHP4-211ENST00000622020 GIGYF1O75420 1035 aaPredicted RBP18.66■□□□□ 0.58
NPHP4-211ENST00000622020 SMAP1Q8IYB5 467 aaPredicted RBP18.66■□□□□ 0.58
NPHP4-211ENST00000622020 BRF1Q92994 677 aa18.66■□□□□ 0.58
NPHP4-211ENST00000622020 RNF20Q5VTR2 975 aa18.66■□□□□ 0.58
NPHP4-211ENST00000622020 ERC1Q8IUD2 1116 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms