RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 ARHGEF10O15013 1369 aa10.77□□□□□ -0.69
GGA3-222ENST00000621217 SETQ01105 290 aaPredicted RBP10.77□□□□□ -0.69
GGA3-222ENST00000621217 TTLL7Q6ZT98 887 aa10.77□□□□□ -0.69
GGA3-222ENST00000621217 RAB11FIP4Q86YS3 637 aa10.77□□□□□ -0.69
GGA3-222ENST00000621217 TSPY26PQ9H489 355 aa10.77□□□□□ -0.69
GGA3-222ENST00000621217 MBD3O95983 291 aa10.76□□□□□ -0.69
GGA3-222ENST00000621217 TIMM10P62072 90 aa10.76□□□□□ -0.69
GGA3-222ENST00000621217 GUCY1B3Q02153 619 aa10.76□□□□□ -0.69
GGA3-222ENST00000621217 NCBP3Q53F19 620 aaKnown RBP10.76□□□□□ -0.69
GGA3-222ENST00000621217 EDC3Q96F86 508 aaKnown RBP10.76□□□□□ -0.69
GGA3-222ENST00000621217 TMX4Q9H1E5 349 aaPredicted RBP10.76□□□□□ -0.69
GGA3-222ENST00000621217 ZSCAN23Q3MJ62 389 aa10.76□□□□□ -0.69
GGA3-222ENST00000621217 ASAP1Q9ULH1 1129 aa10.76□□□□□ -0.69
GGA3-222ENST00000621217 UQCRHLA0A096LP55 91 aa10.76□□□□□ -0.69
GGA3-222ENST00000621217 CPLX1O14810 134 aa10.76□□□□□ -0.69
GGA3-222ENST00000621217 UQCRHP07919 91 aa10.76□□□□□ -0.69
GGA3-222ENST00000621217 IFIT1P09914 478 aaKnown RBP10.76□□□□□ -0.69
GGA3-222ENST00000621217 SLC4A8Q2Y0W8 1093 aa10.75□□□□□ -0.69
GGA3-222ENST00000621217 NFXL1Q6ZNB6 911 aa10.75□□□□□ -0.69
GGA3-222ENST00000621217 RALYLQ86SE5 291 aaKnown RBP10.75□□□□□ -0.69
GGA3-222ENST00000621217 GAS2L3Q86XJ1 694 aa10.75□□□□□ -0.69
GGA3-222ENST00000621217 ZNF219Q9P2Y4 722 aaPredicted RBP10.75□□□□□ -0.69
GGA3-222ENST00000621217 SOS1Q07889 1333 aaPredicted RBP10.75□□□□□ -0.69
GGA3-222ENST00000621217 SETBP1Q9Y6X0 1596 aa10.75□□□□□ -0.69
GGA3-222ENST00000621217 TRDNQ13061 729 aa10.75□□□□□ -0.69
GGA3-222ENST00000621217 SUCLG2Q96I99 432 aa10.75□□□□□ -0.69
GGA3-222ENST00000621217 HAND2P61296 217 aa10.75□□□□□ -0.69
GGA3-222ENST00000621217 CNPY2Q9Y2B0 182 aa10.75□□□□□ -0.69
GGA3-222ENST00000621217 DEPDC5O75140 1603 aa10.74□□□□□ -0.69
GGA3-222ENST00000621217 CPSF1Q10570 1443 aaKnown RBP10.74□□□□□ -0.69
GGA3-222ENST00000621217 PNPLA6Q8IY17 1366 aa10.74□□□□□ -0.69
GGA3-222ENST00000621217 ATP2B1P20020 1258 aa10.74□□□□□ -0.69
GGA3-222ENST00000621217 PSMA5P28066 241 aa10.74□□□□□ -0.69
GGA3-222ENST00000621217 KLHL40Q2TBA0 621 aa10.74□□□□□ -0.69
GGA3-222ENST00000621217 GJB2P29033 226 aa10.74□□□□□ -0.69
GGA3-222ENST00000621217 SAMD1Q6SPF0 538 aaPredicted RBP10.74□□□□□ -0.69
GGA3-222ENST00000621217 ZSCAN30Q86W11 494 aa10.74□□□□□ -0.69
GGA3-222ENST00000621217 FAM173BQ6P4H8 233 aa10.74□□□□□ -0.69
GGA3-222ENST00000621217 LIMCH1Q9UPQ0 1083 aa10.74□□□□□ -0.69
GGA3-222ENST00000621217 MYO5BQ9ULV0 1848 aa10.74□□□□□ -0.69
GGA3-222ENST00000621217 CYP27B1O15528 508 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 HCLS1P14317 486 aaPredicted RBP10.73□□□□□ -0.69
GGA3-222ENST00000621217 AK2P54819 239 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 CCT2P78371 535 aaKnown RBP10.73□□□□□ -0.69
GGA3-222ENST00000621217 NOM1Q5C9Z4 860 aaKnown RBP10.73□□□□□ -0.69
GGA3-222ENST00000621217 IQSEC2Q5JU85 1478 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 NRXN1Q9ULB1 1477 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 TMEM131LA2VDJ0 1609 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 PCDH11XQ9BZA7 1347 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 PCDH11YQ9BZA8 1340 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 TFCP2Q12800 502 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 FAM227BQ96M60 508 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 RICTORQ6R327 1708 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 MYOM1P52179 1685 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 CREBRFQ8IUR6 639 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 ZNF592Q92610 1267 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 JAG2Q9Y219 1238 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 BECN2A8MW95 431 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 CLCN1P35523 988 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
GGA3-222ENST00000621217 CKAP2LQ8IYA6 745 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 ZNF830Q96NB3 372 aaPredicted RBP10.73□□□□□ -0.69
GGA3-222ENST00000621217 USP25Q9UHP3 1055 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 MYO3AQ8NEV4 1616 aa10.73□□□□□ -0.69
GGA3-222ENST00000621217 AGLP35573 1532 aa10.72□□□□□ -0.69
GGA3-222ENST00000621217 CDK12Q9NYV4 1490 aaPredicted RBP10.72□□□□□ -0.69
GGA3-222ENST00000621217 NMIQ13287 307 aaPredicted RBP10.72□□□□□ -0.69
GGA3-222ENST00000621217 RBM8AQ9Y5S9 174 aaKnown RBP10.72□□□□□ -0.69
GGA3-222ENST00000621217 ADGRL3Q9HAR2 1447 aa10.72□□□□□ -0.69
GGA3-222ENST00000621217 ZPR1O75312 459 aa10.72□□□□□ -0.69
GGA3-222ENST00000621217 CHST3Q7LGC8 479 aa10.72□□□□□ -0.69
GGA3-222ENST00000621217 USP48Q86UV5 1035 aa10.72□□□□□ -0.69
GGA3-222ENST00000621217 CCDC82Q8N4S0 544 aa10.72□□□□□ -0.69
GGA3-222ENST00000621217 LRP2BPQ9P2M1 347 aa10.72□□□□□ -0.69
GGA3-222ENST00000621217 NIP7Q9Y221 180 aaKnown RBP eCLIP10.72□□□□□ -0.69
GGA3-222ENST00000621217 STX6O43752 255 aa10.72□□□□□ -0.69
GGA3-222ENST00000621217 GOLGA6L19H0YKK7 550 aa10.71□□□□□ -0.69
GGA3-222ENST00000621217 LRRFIP1Q32MZ4 808 aaKnown RBP10.71□□□□□ -0.69
GGA3-222ENST00000621217 GIMAP6Q6P9H5 292 aa10.71□□□□□ -0.69
GGA3-222ENST00000621217 CCDC129Q6ZRS4 1044 aa10.71□□□□□ -0.69
GGA3-222ENST00000621217 PIBF1Q8WXW3 757 aa10.71□□□□□ -0.69
GGA3-222ENST00000621217 ALDH1L1O75891 902 aa10.71□□□□□ -0.69
GGA3-222ENST00000621217 RAI14Q9P0K7 980 aa10.71□□□□□ -0.69
GGA3-222ENST00000621217 PPLO60437 1756 aa10.71□□□□□ -0.7
GGA3-222ENST00000621217 TPM4P67936 248 aa10.71□□□□□ -0.7
GGA3-222ENST00000621217 ZC3H13Q5T200 1668 aaKnown RBP10.7□□□□□ -0.7
GGA3-222ENST00000621217 IGHMBP2P38935 993 aaKnown RBP10.7□□□□□ -0.7
GGA3-222ENST00000621217 DNM1Q05193 864 aaKnown RBP10.7□□□□□ -0.7
GGA3-222ENST00000621217 SIGLEC1Q9BZZ2 1709 aa10.7□□□□□ -0.7
GGA3-222ENST00000621217 ANKRD18BA2A2Z9 1011 aa10.7□□□□□ -0.7
GGA3-222ENST00000621217 BRPF1P55201 1214 aaPredicted RBP10.7□□□□□ -0.7
GGA3-222ENST00000621217 GCKRQ14397 625 aa10.7□□□□□ -0.7
GGA3-222ENST00000621217 SASS6Q6UVJ0 657 aa10.7□□□□□ -0.7
GGA3-222ENST00000621217 BBXQ8WY36 941 aaPredicted RBP10.7□□□□□ -0.7
GGA3-222ENST00000621217 EVI5LQ96CN4 794 aa10.7□□□□□ -0.7
GGA3-222ENST00000621217 DBNDD2Q9BQY9 259 aa10.7□□□□□ -0.7
GGA3-222ENST00000621217 HIP1O00291 1037 aa10.7□□□□□ -0.7
GGA3-222ENST00000621217 GADD45BO75293 160 aaPredicted RBP10.7□□□□□ -0.7
GGA3-222ENST00000621217 KRT85P78386 507 aa10.7□□□□□ -0.7
GGA3-222ENST00000621217 SPATA32Q96LK8 384 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms