RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 CLCN1P35523 988 aa8.73□□□□□ -1.01
BRCC3-209ENST00000620502 R3HDM1Q15032 1099 aaKnown RBP8.73□□□□□ -1.01
BRCC3-209ENST00000620502 MTHFSDQ2M296 383 aaKnown RBP8.73□□□□□ -1.01
BRCC3-209ENST00000620502 ZNF530Q6P9A1 599 aaPredicted RBP8.73□□□□□ -1.01
BRCC3-209ENST00000620502 MPRIPQ6WCQ1 1025 aa8.73□□□□□ -1.01
BRCC3-209ENST00000620502 SULF1Q8IWU6 871 aa8.73□□□□□ -1.01
BRCC3-209ENST00000620502 PIGBQ92521 554 aa8.73□□□□□ -1.01
BRCC3-209ENST00000620502 DCAF5Q96JK2 942 aa8.73□□□□□ -1.01
BRCC3-209ENST00000620502 GPCPD1Q9NPB8 672 aa8.73□□□□□ -1.01
BRCC3-209ENST00000620502 LRRC4BQ9NT99 713 aa8.73□□□□□ -1.01
BRCC3-209ENST00000620502 SCN11AQ9UI33 1791 aa8.73□□□□□ -1.01
BRCC3-209ENST00000620502 VIRMAQ69YN4 1812 aaKnown RBP8.73□□□□□ -1.01
BRCC3-209ENST00000620502 PAPPAQ13219 1627 aa8.72□□□□□ -1.01
BRCC3-209ENST00000620502 KDM6AO15550 1401 aaPredicted RBP8.72□□□□□ -1.01
BRCC3-209ENST00000620502 CFHP08603 1231 aa8.72□□□□□ -1.01
BRCC3-209ENST00000620502 AKAP4Q5JQC9 854 aa8.72□□□□□ -1.01
BRCC3-209ENST00000620502 NBPF14Q5TI25 921 aa8.72□□□□□ -1.01
BRCC3-209ENST00000620502 PHACTR3Q96KR7 559 aa8.72□□□□□ -1.01
BRCC3-209ENST00000620502 PRR14Q9BWN1 585 aa8.72□□□□□ -1.01
BRCC3-209ENST00000620502 RSPH6AQ9H0K4 717 aa8.72□□□□□ -1.01
BRCC3-209ENST00000620502 PRKRIP1Q9H875 184 aaPredicted RBP8.72□□□□□ -1.01
BRCC3-209ENST00000620502 NUDCQ9Y266 331 aa8.72□□□□□ -1.01
BRCC3-209ENST00000620502 MYBBP1AQ9BQG0 1328 aaKnown RBP8.72□□□□□ -1.01
BRCC3-209ENST00000620502 ADAMTS7Q9UKP4 1686 aa8.72□□□□□ -1.01
BRCC3-209ENST00000620502 ERVV-2B6SEH9 535 aa8.71□□□□□ -1.02
BRCC3-209ENST00000620502 ITGBL1O95965 494 aaPredicted RBP8.71□□□□□ -1.02
BRCC3-209ENST00000620502 HSP90AB1P08238 724 aaKnown RBP8.71□□□□□ -1.02
BRCC3-209ENST00000620502 U2AF1L5P0DN76 240 aaPredicted RBP8.71□□□□□ -1.02
BRCC3-209ENST00000620502 PRKAR2BP31323 418 aa8.71□□□□□ -1.02
BRCC3-209ENST00000620502 KCNQ4P56696 695 aa8.71□□□□□ -1.02
BRCC3-209ENST00000620502 U2AF1Q01081 240 aaKnown RBP eCLIP8.71□□□□□ -1.02
BRCC3-209ENST00000620502 C1orf141Q5JVX7 400 aa8.71□□□□□ -1.02
BRCC3-209ENST00000620502 SLC27A3Q5K4L6 730 aa8.71□□□□□ -1.02
BRCC3-209ENST00000620502 LGR6Q9HBX8 967 aa8.71□□□□□ -1.02
BRCC3-209ENST00000620502 FAM217BQ9NTX9 383 aaPredicted RBP8.71□□□□□ -1.02
BRCC3-209ENST00000620502 ACTN4O43707 911 aaKnown RBP8.7□□□□□ -1.02
BRCC3-209ENST00000620502 CD46P15529 392 aa8.7□□□□□ -1.02
BRCC3-209ENST00000620502 RDH13Q8NBN7 331 aa8.7□□□□□ -1.02
BRCC3-209ENST00000620502 ATG3Q9NT62 314 aa8.7□□□□□ -1.02
BRCC3-209ENST00000620502 TMOD3Q9NYL9 352 aa8.7□□□□□ -1.02
BRCC3-209ENST00000620502 PLA2G2EQ9NZK7 142 aa8.7□□□□□ -1.02
BRCC3-209ENST00000620502 ASAP1Q9ULH1 1129 aa8.7□□□□□ -1.02
BRCC3-209ENST00000620502 TAF1LQ8IZX4 1826 aa8.7□□□□□ -1.02
BRCC3-209ENST00000620502 PALLDQ8WX93 1383 aa8.7□□□□□ -1.02
BRCC3-209ENST00000620502 RNMTO43148 476 aaKnown RBP8.69□□□□□ -1.02
BRCC3-209ENST00000620502 GCGRP47871 477 aa8.69□□□□□ -1.02
BRCC3-209ENST00000620502 CABP4P57796 275 aa8.69□□□□□ -1.02
BRCC3-209ENST00000620502 SLC15A2Q16348 729 aa8.69□□□□□ -1.02
BRCC3-209ENST00000620502 KMT5BQ4FZB7 885 aa8.69□□□□□ -1.02
BRCC3-209ENST00000620502 TJAP1Q5JTD0 557 aa8.69□□□□□ -1.02
BRCC3-209ENST00000620502 PARP9Q8IXQ6 854 aa8.69□□□□□ -1.02
BRCC3-209ENST00000620502 NFATC2IPQ8NCF5 419 aa8.69□□□□□ -1.02
BRCC3-209ENST00000620502 SMARCC1Q92922 1105 aaPredicted RBP8.69□□□□□ -1.02
BRCC3-209ENST00000620502 PLEKHF1Q96S99 279 aa8.69□□□□□ -1.02
BRCC3-209ENST00000620502 CCNL1Q9UK58 526 aaPredicted RBP8.69□□□□□ -1.02
BRCC3-209ENST00000620502 C5P01031 1676 aa8.69□□□□□ -1.02
BRCC3-209ENST00000620502 CASZ1Q86V15 1759 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 PDE4DQ08499 809 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 TTLL12Q14166 644 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-209ENST00000620502 ZNF827Q17R98 1081 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 TPRNQ4KMQ1 711 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 IFFO2Q5TF58 517 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 IL17REQ8NFR9 667 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 PDGFDQ9GZP0 370 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-209ENST00000620502 SLC52A2Q9HAB3 445 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 STK32BQ9NY57 414 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 MRC1P22897 1456 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 ZNF831Q5JPB2 1677 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 QSER1Q2KHR3 1735 aa8.68□□□□□ -1.02
BRCC3-209ENST00000620502 SIPA1L3O60292 1781 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-209ENST00000620502 GNAT3A8MTJ3 354 aa8.67□□□□□ -1.02
BRCC3-209ENST00000620502 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
BRCC3-209ENST00000620502 SLC4A9Q96Q91 983 aa8.67□□□□□ -1.02
BRCC3-209ENST00000620502 TUBGCP6Q96RT7 1819 aa8.67□□□□□ -1.02
BRCC3-209ENST00000620502 MAP3K5Q99683 1374 aa8.67□□□□□ -1.02
BRCC3-209ENST00000620502 MTRQ99707 1265 aa8.67□□□□□ -1.02
BRCC3-209ENST00000620502 DLG5Q8TDM6 1919 aa8.66□□□□□ -1.02
BRCC3-209ENST00000620502 LRP5O75197 1615 aa8.66□□□□□ -1.02
BRCC3-209ENST00000620502 CEMIPQ8WUJ3 1361 aa8.66□□□□□ -1.02
BRCC3-209ENST00000620502 LOC102724428A0A0B4J2F2 783 aa8.66□□□□□ -1.02
BRCC3-209ENST00000620502 SSTR3P32745 418 aaPredicted RBP8.66□□□□□ -1.02
BRCC3-209ENST00000620502 SIK1P57059 783 aa8.66□□□□□ -1.02
BRCC3-209ENST00000620502 ITPK1Q13572 414 aa8.66□□□□□ -1.02
BRCC3-209ENST00000620502 CCDC184Q52MB2 194 aa8.66□□□□□ -1.02
BRCC3-209ENST00000620502 PCDHB3Q9Y5E6 796 aa8.66□□□□□ -1.02
BRCC3-209ENST00000620502 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
BRCC3-209ENST00000620502 PNPLA7Q6ZV29 1317 aa8.65□□□□□ -1.02
BRCC3-209ENST00000620502 ATP6V1AP38606 617 aa8.65□□□□□ -1.02
BRCC3-209ENST00000620502 COL5A3P25940 1745 aaPredicted RBP8.65□□□□□ -1.03
BRCC3-209ENST00000620502 UBR2Q8IWV8 1755 aa8.64□□□□□ -1.03
BRCC3-209ENST00000620502 TJP1Q07157 1748 aa8.64□□□□□ -1.03
BRCC3-209ENST00000620502 HTATSF1O43719 755 aaKnown RBP8.64□□□□□ -1.03
BRCC3-209ENST00000620502 KCNC4Q03721 635 aa8.64□□□□□ -1.03
BRCC3-209ENST00000620502 SLC39A6Q13433 755 aa8.64□□□□□ -1.03
BRCC3-209ENST00000620502 BLOC1S3Q6QNY0 202 aa8.64□□□□□ -1.03
BRCC3-209ENST00000620502 LINC00116Q8NCU8 138 aa8.64□□□□□ -1.03
BRCC3-209ENST00000620502 PNNQ9H307 717 aaKnown RBP8.64□□□□□ -1.03
BRCC3-209ENST00000620502 IL21Q9HBE4 155 aa8.64□□□□□ -1.03
BRCC3-209ENST00000620502 ADAMTS8Q9UP79 889 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms