RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ISCA1Q9BUE6 129 aa6.71□□□□□ -1.34
SHMT1-211ENST00000618902 KIAA1551Q9HCM1 1747 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 NRXN2Q9P2S2 1712 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 PI4KAP2A4QPH2 592 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 FAM177BA6PVY3 158 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 F6X3S4 739 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 IGKV5-2P06315 115 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 ALDH1B1P30837 517 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 TRIM28Q13263 835 aaKnown RBP6.7□□□□□ -1.34
SHMT1-211ENST00000618902 TCIRG1Q13488 830 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 SUSD4Q5VX71 490 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 STYK1Q6J9G0 422 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 PRR5LQ6MZQ0 368 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 C3orf67Q6ZVT6 689 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 NLRP10Q86W26 655 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 TTLL6Q8N841 843 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 PI4KAP1Q8N8J0 262 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 PLBD2Q8NHP8 589 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 VPS33BQ9H267 617 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 TNNQ9UQP3 1299 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 NIP7Q9Y221 180 aaKnown RBP eCLIP6.7□□□□□ -1.34
SHMT1-211ENST00000618902 MAP3K2Q9Y2U5 619 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 PXDNLA1KZ92 1463 aa6.7□□□□□ -1.34
SHMT1-211ENST00000618902 ABCC12Q96J65 1359 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 CACNA1FO60840 1977 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 ANKRD31Q8N7Z5 1873 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 NPHP1O15259 732 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 BCAR3O75815 825 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 NTSR2O95665 410 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 CT47B1P0C2W7 299 aaPredicted RBP6.69□□□□□ -1.34
SHMT1-211ENST00000618902 KCNA3P22001 575 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 KSR2Q6VAB6 950 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 TMC4Q7Z404 712 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 SLC51AQ86UW1 340 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 NBPF5PQ86XG9 351 aaPredicted RBP6.69□□□□□ -1.34
SHMT1-211ENST00000618902 NUTM1Q86Y26 1132 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 KLHL34Q8N239 644 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 JARID2Q92833 1246 aaPredicted RBP6.69□□□□□ -1.34
SHMT1-211ENST00000618902 MASTLQ96GX5 879 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 MYD88Q99836 296 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 METTL22Q9BUU2 404 aaPredicted RBP6.69□□□□□ -1.34
SHMT1-211ENST00000618902 STK31Q9BXU1 1019 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 TSHZ2Q9NRE2 1034 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 LTBP3Q9NS15 1303 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 ARFGEF2Q9Y6D5 1785 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 ARFGEF1Q9Y6D6 1849 aa6.69□□□□□ -1.34
SHMT1-211ENST00000618902 DDX58O95786 925 aaKnown RBP6.68□□□□□ -1.34
SHMT1-211ENST00000618902 SRGNP10124 158 aa6.68□□□□□ -1.34
SHMT1-211ENST00000618902 NPR1P16066 1061 aa6.68□□□□□ -1.34
SHMT1-211ENST00000618902 DPEP1P16444 411 aa6.68□□□□□ -1.34
SHMT1-211ENST00000618902 GTF2E1P29083 439 aaPredicted RBP6.68□□□□□ -1.34
SHMT1-211ENST00000618902 CHRNA5P30532 468 aa6.68□□□□□ -1.34
SHMT1-211ENST00000618902 BRPF1P55201 1214 aaPredicted RBP6.68□□□□□ -1.34
SHMT1-211ENST00000618902 CWF19L2Q2TBE0 894 aaKnown RBP6.68□□□□□ -1.34
SHMT1-211ENST00000618902 ALDH1L2Q3SY69 923 aa6.68□□□□□ -1.34
SHMT1-211ENST00000618902 CRY2Q49AN0 593 aa6.68□□□□□ -1.34
SHMT1-211ENST00000618902 ERFEQ4G0M1 354 aa6.68□□□□□ -1.34
SHMT1-211ENST00000618902 RIC3Q7Z5B4 369 aa6.68□□□□□ -1.34
SHMT1-211ENST00000618902 TMX4Q9H1E5 349 aaPredicted RBP6.68□□□□□ -1.34
SHMT1-211ENST00000618902 SMC4Q9NTJ3 1288 aa6.68□□□□□ -1.34
SHMT1-211ENST00000618902 PPP4R2Q9NY27 417 aa6.68□□□□□ -1.34
SHMT1-211ENST00000618902 ANKRD36CQ5JPF3 1778 aa6.67□□□□□ -1.34
SHMT1-211ENST00000618902 BRCA1P38398 1863 aaKnown RBP6.67□□□□□ -1.34
SHMT1-211ENST00000618902 A0A0G2JLW4 131 aa6.67□□□□□ -1.34
SHMT1-211ENST00000618902 NEURL1BA8MQ27 555 aa6.67□□□□□ -1.34
SHMT1-211ENST00000618902 YBX3P16989 372 aaKnown RBP eCLIP6.67□□□□□ -1.34
SHMT1-211ENST00000618902 HOXA10P31260 410 aaPredicted RBP6.67□□□□□ -1.34
SHMT1-211ENST00000618902 CASP7P55210 303 aa6.67□□□□□ -1.34
SHMT1-211ENST00000618902 FKBP5Q13451 457 aaPredicted RBP6.67□□□□□ -1.34
SHMT1-211ENST00000618902 SLC10A5Q5PT55 438 aa6.67□□□□□ -1.34
SHMT1-211ENST00000618902 BEND3Q5T5X7 828 aa6.67□□□□□ -1.34
SHMT1-211ENST00000618902 RTKN2Q8IZC4 609 aa6.67□□□□□ -1.34
SHMT1-211ENST00000618902 ZNF784Q8NCA9 323 aaPredicted RBP6.67□□□□□ -1.34
SHMT1-211ENST00000618902 DNAAF4Q8WXU2 420 aa6.67□□□□□ -1.34
SHMT1-211ENST00000618902 WWC3Q9ULE0 1092 aa6.67□□□□□ -1.34
SHMT1-211ENST00000618902 NOB1Q9ULX3 412 aaKnown RBP6.67□□□□□ -1.34
SHMT1-211ENST00000618902 BCS1LQ9Y276 419 aa6.67□□□□□ -1.34
SHMT1-211ENST00000618902 TNRC6CQ9HCJ0 1690 aaKnown RBP6.67□□□□□ -1.34
SHMT1-211ENST00000618902 COL4A1P02462 1669 aa6.66□□□□□ -1.34
SHMT1-211ENST00000618902 RLBP1P12271 317 aa6.66□□□□□ -1.34
SHMT1-211ENST00000618902 HCLS1P14317 486 aaPredicted RBP6.66□□□□□ -1.34
SHMT1-211ENST00000618902 LMNB1P20700 586 aa6.66□□□□□ -1.34
SHMT1-211ENST00000618902 RTL5Q5HYW3 569 aaPredicted RBP6.66□□□□□ -1.34
SHMT1-211ENST00000618902 C2CD5Q86YS7 1000 aa6.66□□□□□ -1.34
SHMT1-211ENST00000618902 FAM89AQ96GI7 184 aa6.66□□□□□ -1.34
SHMT1-211ENST00000618902 NLRP3Q96P20 1036 aa6.66□□□□□ -1.34
SHMT1-211ENST00000618902 CRAMP1Q96RY5 1269 aa6.66□□□□□ -1.34
SHMT1-211ENST00000618902 UTP14AQ9BVJ6 771 aaKnown RBP6.66□□□□□ -1.34
SHMT1-211ENST00000618902 COL11A2P13942 1736 aaPredicted RBP6.66□□□□□ -1.34
SHMT1-211ENST00000618902 KDM2BQ8NHM5 1336 aa6.66□□□□□ -1.34
SHMT1-211ENST00000618902 N4BP2Q86UW6 1770 aaPredicted RBP6.66□□□□□ -1.34
SHMT1-211ENST00000618902 DLEC1Q9Y238 1755 aa6.65□□□□□ -1.34
SHMT1-211ENST00000618902 BBOX1O75936 387 aa6.65□□□□□ -1.34
SHMT1-211ENST00000618902 TRIM27P14373 513 aa6.65□□□□□ -1.34
SHMT1-211ENST00000618902 HOXD11P31277 338 aaPredicted RBP6.65□□□□□ -1.34
SHMT1-211ENST00000618902 GCKRQ14397 625 aa6.65□□□□□ -1.34
SHMT1-211ENST00000618902 DPY19L2Q6NUT2 758 aa6.65□□□□□ -1.34
SHMT1-211ENST00000618902 CCDC191Q8NCU4 936 aa6.65□□□□□ -1.34
SHMT1-211ENST00000618902 LINS1Q8NG48 757 aa6.65□□□□□ -1.34
SHMT1-211ENST00000618902 RBM17Q96I25 401 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms