RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 PKD1L3Q7Z443 1732 aa20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 AFDNP55196 1824 aaKnown RBP20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 TCHHQ07283 1943 aa20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 TMEM63CQ9P1W3 806 aa20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 MRC1P22897 1456 aa20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 NEXNQ0ZGT2 675 aa20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 PRPF40BQ6NWY9 871 aaKnown RBP20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 ANKRD13DQ6ZTN6 518 aa20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 GPATCH3Q96I76 525 aa20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 DCAF5Q96JK2 942 aa20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 HDAC5Q9UQL6 1122 aa20.29■□□□□ 0.84
SEMA3B-213ENST00000618865 RPAP1Q9BWH6 1393 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 LARGE1O95461 756 aa20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 SNRPA1P09661 255 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 COL9A3Q14050 684 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 TTC5Q8N0Z6 440 aa20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 ERBB4Q15303 1308 aa20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 GLI3P10071 1580 aa20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 CASTP20810 708 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 HSPA2P54652 639 aa20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 BBXQ8WY36 941 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 EVI5LQ96CN4 794 aa20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 BOLA2Q9H3K6 86 aa20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 SPATA31A3Q5VYP0 1347 aa20.28■□□□□ 0.84
SEMA3B-213ENST00000618865 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.84
SEMA3B-213ENST00000618865 PTCD1O75127 700 aaKnown RBP20.27■□□□□ 0.84
SEMA3B-213ENST00000618865 DCCP43146 1447 aa20.27■□□□□ 0.84
SEMA3B-213ENST00000618865 NASPP49321 788 aaPredicted RBP20.27■□□□□ 0.84
SEMA3B-213ENST00000618865 GDPD2Q9HCC8 539 aa20.27■□□□□ 0.84
SEMA3B-213ENST00000618865 ARFGEF2Q9Y6D5 1785 aa20.27■□□□□ 0.84
SEMA3B-213ENST00000618865 NMIQ13287 307 aaPredicted RBP20.26■□□□□ 0.83
SEMA3B-213ENST00000618865 PRIM1P49642 420 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-213ENST00000618865 CADPS2Q86UW7 1296 aa20.26■□□□□ 0.83
SEMA3B-213ENST00000618865 RUFY2Q8WXA3 655 aa20.26■□□□□ 0.83
SEMA3B-213ENST00000618865 EDC3Q96F86 508 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-213ENST00000618865 RBSNQ9H1K0 784 aa20.26■□□□□ 0.83
SEMA3B-213ENST00000618865 CABP4P57796 275 aa20.25■□□□□ 0.83
SEMA3B-213ENST00000618865 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
SEMA3B-213ENST00000618865 ABCC6O95255 1503 aa20.25■□□□□ 0.83
SEMA3B-213ENST00000618865 UBE3BQ7Z3V4 1068 aa20.25■□□□□ 0.83
SEMA3B-213ENST00000618865 JAKMIP1Q96N16 626 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-213ENST00000618865 XIRP1Q702N8 1843 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-213ENST00000618865 A0A0D9SFI3 127 aa20.24■□□□□ 0.83
SEMA3B-213ENST00000618865 CCDC171Q6TFL3 1326 aa20.24■□□□□ 0.83
SEMA3B-213ENST00000618865 RFX5P48382 616 aaPredicted RBP20.24■□□□□ 0.83
SEMA3B-213ENST00000618865 LIMCH1Q9UPQ0 1083 aa20.24■□□□□ 0.83
SEMA3B-213ENST00000618865 NECTIN1Q15223 517 aa20.23■□□□□ 0.83
SEMA3B-213ENST00000618865 NDUFB9Q9Y6M9 179 aa20.23■□□□□ 0.83
SEMA3B-213ENST00000618865 GADD45BO75293 160 aaPredicted RBP20.23■□□□□ 0.83
SEMA3B-213ENST00000618865 RBM8AQ9Y5S9 174 aaKnown RBP20.23■□□□□ 0.83
SEMA3B-213ENST00000618865 SYCE3A1L190 88 aa20.23■□□□□ 0.83
SEMA3B-213ENST00000618865 TAF6LQ9Y6J9 622 aa20.23■□□□□ 0.83
SEMA3B-213ENST00000618865 PTPN12Q05209 780 aaKnown RBP20.22■□□□□ 0.83
SEMA3B-213ENST00000618865 KCNB2Q92953 911 aa20.22■□□□□ 0.83
SEMA3B-213ENST00000618865 NBPF26B4DH59 902 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 CHGBP05060 677 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 NBPF14Q5TI25 921 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 NBPF10Q6P3W6 841 aaKnown RBP20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 NBPF15Q8N660 670 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 FSD1Q9BTV5 496 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 CPDO75976 1380 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 ST3GAL1Q11201 340 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 TFCP2Q12800 502 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 ZSWIM6Q9HCJ5 1215 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 PDRG1Q9NUG6 133 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 DBNLQ9UJU6 430 aaKnown RBP20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 LAMB4A4D0S4 1761 aa20.21■□□□□ 0.83
SEMA3B-213ENST00000618865 WDR33Q9C0J8 1336 aaKnown RBP20.2■□□□□ 0.83
SEMA3B-213ENST00000618865 CREB3L3Q68CJ9 461 aa20.2■□□□□ 0.82
SEMA3B-213ENST00000618865 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
SEMA3B-213ENST00000618865 A0A087WZG4 1122 aa20.2■□□□□ 0.82
SEMA3B-213ENST00000618865 ZNF589Q86UQ0 364 aaPredicted RBP20.2■□□□□ 0.82
SEMA3B-213ENST00000618865 CCDC83Q8IWF9 413 aa20.2■□□□□ 0.82
SEMA3B-213ENST00000618865 COPRSQ9NQ92 184 aa20.2■□□□□ 0.82
SEMA3B-213ENST00000618865 CASP7P55210 303 aa20.2■□□□□ 0.82
SEMA3B-213ENST00000618865 USP48Q86UV5 1035 aa20.2■□□□□ 0.82
SEMA3B-213ENST00000618865 MAP4K1Q92918 833 aa20.2■□□□□ 0.82
SEMA3B-213ENST00000618865 SYT1P21579 422 aa20.19■□□□□ 0.82
SEMA3B-213ENST00000618865 HSP90AA2PQ14568 343 aaPredicted RBP20.19■□□□□ 0.82
SEMA3B-213ENST00000618865 PPP1R9BQ96SB3 815 aa20.19■□□□□ 0.82
SEMA3B-213ENST00000618865 ESPNB1AK53 854 aa20.18■□□□□ 0.82
SEMA3B-213ENST00000618865 RABL6Q3YEC7 729 aaPredicted RBP20.18■□□□□ 0.82
SEMA3B-213ENST00000618865 VPS53Q5VIR6 699 aa20.18■□□□□ 0.82
SEMA3B-213ENST00000618865 TTLL7Q6ZT98 887 aa20.18■□□□□ 0.82
SEMA3B-213ENST00000618865 PARP4Q9UKK3 1724 aaKnown RBP20.18■□□□□ 0.82
SEMA3B-213ENST00000618865 SLC27A2O14975 620 aa20.18■□□□□ 0.82
SEMA3B-213ENST00000618865 TNNI3KQ59H18 835 aa20.18■□□□□ 0.82
SEMA3B-213ENST00000618865 TCEANC2Q96MN5 208 aa20.18■□□□□ 0.82
SEMA3B-213ENST00000618865 CYP46A1Q9Y6A2 500 aa20.18■□□□□ 0.82
SEMA3B-213ENST00000618865 FPGT-TNNI3KV9GXZ4 949 aa20.18■□□□□ 0.82
SEMA3B-213ENST00000618865 CLCN1P35523 988 aa20.17■□□□□ 0.82
SEMA3B-213ENST00000618865 KCNJ4P48050 445 aa20.17■□□□□ 0.82
SEMA3B-213ENST00000618865 CCDC173Q0VFZ6 552 aa20.17■□□□□ 0.82
SEMA3B-213ENST00000618865 NECAB1Q8N987 351 aa20.17■□□□□ 0.82
SEMA3B-213ENST00000618865 TRIM44Q96DX7 344 aaPredicted RBP20.17■□□□□ 0.82
SEMA3B-213ENST00000618865 CNPY2Q9Y2B0 182 aa20.17■□□□□ 0.82
SEMA3B-213ENST00000618865 MED23Q9ULK4 1368 aa20.17■□□□□ 0.82
SEMA3B-213ENST00000618865 MBD3O95983 291 aa20.17■□□□□ 0.82
SEMA3B-213ENST00000618865 ME3Q16798 604 aa20.17■□□□□ 0.82
SEMA3B-213ENST00000618865 LRSAM1Q6UWE0 723 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms