RNA–Protein interactions for RNA: ENST00000606498.5

TM2D1-212, Transcript of TM2 domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TM2D1, Length 969 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-212ENST00000606498 PARP10Q53GL7 1025 aa22.4■■□□□ 1.18
TM2D1-212ENST00000606498 SLC51AQ86UW1 340 aa22.4■■□□□ 1.18
TM2D1-212ENST00000606498 C7orf43Q8WVR3 580 aa22.4■■□□□ 1.18
TM2D1-212ENST00000606498 ELL2O00472 640 aaPredicted RBP22.39■■□□□ 1.17
TM2D1-212ENST00000606498 KIF3CO14782 793 aa22.39■■□□□ 1.17
TM2D1-212ENST00000606498 LMNB1P20700 586 aa22.39■■□□□ 1.17
TM2D1-212ENST00000606498 GTF2E1P29083 439 aaPredicted RBP22.39■■□□□ 1.17
TM2D1-212ENST00000606498 OLFM4Q6UX06 510 aa22.39■■□□□ 1.17
TM2D1-212ENST00000606498 NLRP10Q86W26 655 aa22.39■■□□□ 1.17
TM2D1-212ENST00000606498 TSPYL6Q8N831 410 aa22.39■■□□□ 1.17
TM2D1-212ENST00000606498 LTBP3Q9NS15 1303 aa22.38■■□□□ 1.17
TM2D1-212ENST00000606498 WDR90Q96KV7 1748 aa22.38■■□□□ 1.17
TM2D1-212ENST00000606498 NMRK2Q9NPI5 230 aa22.38■■□□□ 1.17
TM2D1-212ENST00000606498 ZC3H4Q9UPT8 1303 aaKnown RBP22.37■■□□□ 1.17
TM2D1-212ENST00000606498 PLBD2Q8NHP8 589 aa22.37■■□□□ 1.17
TM2D1-212ENST00000606498 MYH3P11055 1940 aa22.37■■□□□ 1.17
TM2D1-212ENST00000606498 COL4A5P29400 1685 aa22.36■■□□□ 1.17
TM2D1-212ENST00000606498 IL16Q14005 1332 aa22.36■■□□□ 1.17
TM2D1-212ENST00000606498 TCIRG1Q13488 830 aa22.36■■□□□ 1.17
TM2D1-212ENST00000606498 NCBP3Q53F19 620 aaKnown RBP22.36■■□□□ 1.17
TM2D1-212ENST00000606498 HYPKQ9NX55 129 aa22.36■■□□□ 1.17
TM2D1-212ENST00000606498 RNF123Q5XPI4 1314 aa22.35■■□□□ 1.17
TM2D1-212ENST00000606498 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
TM2D1-212ENST00000606498 HSP90AB3PQ58FF7 597 aa22.35■■□□□ 1.17
TM2D1-212ENST00000606498 PPP1R42Q7Z4L9 355 aa22.35■■□□□ 1.17
TM2D1-212ENST00000606498 SYNE4Q8N205 404 aa22.35■■□□□ 1.17
TM2D1-212ENST00000606498 ZNF428Q96B54 188 aa22.35■■□□□ 1.17
TM2D1-212ENST00000606498 UTP14AQ9BVJ6 771 aaKnown RBP22.35■■□□□ 1.17
TM2D1-212ENST00000606498 TAOK3Q9H2K8 898 aa22.35■■□□□ 1.17
TM2D1-212ENST00000606498 PHAXQ9H814 394 aaKnown RBP22.35■■□□□ 1.17
TM2D1-212ENST00000606498 FAM9BQ8IZU0 186 aa22.34■■□□□ 1.17
TM2D1-212ENST00000606498 CCDC93Q567U6 631 aa22.33■■□□□ 1.17
TM2D1-212ENST00000606498 ISCA1Q9BUE6 129 aa22.33■■□□□ 1.17
TM2D1-212ENST00000606498 SALL2Q9Y467 1007 aaPredicted RBP22.33■■□□□ 1.17
TM2D1-212ENST00000606498 LTBP1Q14766 1721 aa22.33■■□□□ 1.17
TM2D1-212ENST00000606498 SPEF2Q9C093 1822 aa22.32■■□□□ 1.16
TM2D1-212ENST00000606498 HOXA10P31260 410 aaPredicted RBP22.32■■□□□ 1.16
TM2D1-212ENST00000606498 SOGA3Q5TF21 947 aa22.32■■□□□ 1.16
TM2D1-212ENST00000606498 ANKRD13DQ6ZTN6 518 aa22.32■■□□□ 1.16
TM2D1-212ENST00000606498 DUOX1Q9NRD9 1551 aa22.32■■□□□ 1.16
TM2D1-212ENST00000606498 SLC10A5Q5PT55 438 aa22.31■■□□□ 1.16
TM2D1-212ENST00000606498 RPGRQ92834 1020 aaKnown RBP22.31■■□□□ 1.16
TM2D1-212ENST00000606498 ATP5J2-PTCD1G3V325 749 aa22.3■■□□□ 1.16
TM2D1-212ENST00000606498 HCLS1P14317 486 aaPredicted RBP22.3■■□□□ 1.16
TM2D1-212ENST00000606498 SPINK5Q9NQ38 1064 aaPredicted RBP22.3■■□□□ 1.16
TM2D1-212ENST00000606498 KDM2BQ8NHM5 1336 aa22.3■■□□□ 1.16
TM2D1-212ENST00000606498 SH3TC1Q8TE82 1336 aa22.3■■□□□ 1.16
TM2D1-212ENST00000606498 TRMT112Q9UI30 125 aaKnown RBP22.29■■□□□ 1.16
TM2D1-212ENST00000606498 ABCC4O15439 1325 aa22.29■■□□□ 1.16
TM2D1-212ENST00000606498 TCERG1O14776 1098 aaKnown RBP22.28■■□□□ 1.16
TM2D1-212ENST00000606498 ALDH1B1P30837 517 aa22.28■■□□□ 1.16
TM2D1-212ENST00000606498 GOLGA2Q08379 1002 aa22.28■■□□□ 1.16
TM2D1-212ENST00000606498 TWISTNBQ3B726 338 aaPredicted RBP22.28■■□□□ 1.16
TM2D1-212ENST00000606498 CCDC30Q5VVM6 783 aa22.28■■□□□ 1.16
TM2D1-212ENST00000606498 CRAMP1Q96RY5 1269 aa22.28■■□□□ 1.16
TM2D1-212ENST00000606498 SCN4AP35499 1836 aa22.27■■□□□ 1.16
TM2D1-212ENST00000606498 FKBP4Q02790 459 aaKnown RBP eCLIP22.27■■□□□ 1.16
TM2D1-212ENST00000606498 WDR63Q8IWG1 891 aa22.27■■□□□ 1.16
TM2D1-212ENST00000606498 ZNF521Q96K83 1311 aa22.27■■□□□ 1.16
TM2D1-212ENST00000606498 PPEF1O14829 653 aaPredicted RBP22.26■■□□□ 1.15
TM2D1-212ENST00000606498 NLRP3Q96P20 1036 aa22.26■■□□□ 1.15
TM2D1-212ENST00000606498 ZNF277Q9NRM2 450 aaPredicted RBP22.26■■□□□ 1.15
TM2D1-212ENST00000606498 GLTPD2A6NH11 291 aa22.25■■□□□ 1.15
TM2D1-212ENST00000606498 RIC3Q7Z5B4 369 aa22.25■■□□□ 1.15
TM2D1-212ENST00000606498 FAM89AQ96GI7 184 aa22.25■■□□□ 1.15
TM2D1-212ENST00000606498 RBM17Q96I25 401 aaKnown RBP22.25■■□□□ 1.15
TM2D1-212ENST00000606498 TRIM28Q13263 835 aaKnown RBP22.24■■□□□ 1.15
TM2D1-212ENST00000606498 G2E3Q7L622 706 aa22.24■■□□□ 1.15
TM2D1-212ENST00000606498 MYD88Q99836 296 aa22.24■■□□□ 1.15
TM2D1-212ENST00000606498 RTKN2Q8IZC4 609 aa22.23■■□□□ 1.15
TM2D1-212ENST00000606498 RRAGCQ9HB90 399 aa22.23■■□□□ 1.15
TM2D1-212ENST00000606498 ZNF541Q9H0D2 1346 aa22.23■■□□□ 1.15
TM2D1-212ENST00000606498 ADAMTSL1Q8N6G6 1762 aa22.22■■□□□ 1.15
TM2D1-212ENST00000606498 EXOSC9Q06265 439 aaKnown RBP22.22■■□□□ 1.15
TM2D1-212ENST00000606498 RTL5Q5HYW3 569 aaPredicted RBP22.22■■□□□ 1.15
TM2D1-212ENST00000606498 PSMD1Q99460 953 aa22.22■■□□□ 1.15
TM2D1-212ENST00000606498 TOMM70O94826 608 aa22.21■■□□□ 1.15
TM2D1-212ENST00000606498 METTL22Q9BUU2 404 aaPredicted RBP22.21■■□□□ 1.15
TM2D1-212ENST00000606498 STK31Q9BXU1 1019 aa22.21■■□□□ 1.15
TM2D1-212ENST00000606498 MAP3K2Q9Y2U5 619 aa22.21■■□□□ 1.15
TM2D1-212ENST00000606498 POTECB2RU33 542 aa22.2■■□□□ 1.14
TM2D1-212ENST00000606498 IARSP41252 1262 aaKnown RBP22.2■■□□□ 1.14
TM2D1-212ENST00000606498 A0A1B0GUL6 1792 aa22.2■■□□□ 1.14
TM2D1-212ENST00000606498 PI4KAP2A4QPH2 592 aa22.19■■□□□ 1.14
TM2D1-212ENST00000606498 DDX58O95786 925 aaKnown RBP22.19■■□□□ 1.14
TM2D1-212ENST00000606498 CC2D2BQ6DHV5 1058 aa22.19■■□□□ 1.14
TM2D1-212ENST00000606498 PI4KAP1Q8N8J0 262 aa22.19■■□□□ 1.14
TM2D1-212ENST00000606498 ATP6V0A2Q9Y487 856 aa22.19■■□□□ 1.14
TM2D1-212ENST00000606498 VAMP4O75379 141 aa22.18■■□□□ 1.14
TM2D1-212ENST00000606498 IGKV5-2P06315 115 aa22.18■■□□□ 1.14
TM2D1-212ENST00000606498 GRAPQ13588 217 aa22.18■■□□□ 1.14
TM2D1-212ENST00000606498 KSR2Q6VAB6 950 aa22.18■■□□□ 1.14
TM2D1-212ENST00000606498 GRAPLQ8TC17 118 aaPredicted RBP22.18■■□□□ 1.14
TM2D1-212ENST00000606498 CHMP4AQ9BY43 222 aa22.18■■□□□ 1.14
TM2D1-212ENST00000606498 IRS4O14654 1257 aaPredicted RBP22.17■■□□□ 1.14
TM2D1-212ENST00000606498 DDNO94850 711 aaPredicted RBP22.17■■□□□ 1.14
TM2D1-212ENST00000606498 SLC4A2P04920 1241 aa22.17■■□□□ 1.14
TM2D1-212ENST00000606498 HSPA6P17066 643 aa22.17■■□□□ 1.14
TM2D1-212ENST00000606498 FLIIQ13045 1269 aa22.17■■□□□ 1.14
TM2D1-212ENST00000606498 SF3B3Q15393 1217 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms