RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 TREML1Q86YW5 311 aa8.55□□□□□ -1.04
HMGB1P51-201ENST00000605166 RHBDD1Q8TEB9 315 aa8.55□□□□□ -1.04
HMGB1P51-201ENST00000605166 IRF7Q92985 503 aa8.55□□□□□ -1.04
HMGB1P51-201ENST00000605166 RNF34Q969K3 372 aa8.55□□□□□ -1.04
HMGB1P51-201ENST00000605166 FRMD6Q96NE9 622 aa8.55□□□□□ -1.04
HMGB1P51-201ENST00000605166 CSRNP1Q96S65 589 aa8.55□□□□□ -1.04
HMGB1P51-201ENST00000605166 FAM13BQ9NYF5 915 aa8.55□□□□□ -1.04
HMGB1P51-201ENST00000605166 PARP3Q9Y6F1 533 aa8.55□□□□□ -1.04
HMGB1P51-201ENST00000605166 SPINT1O43278 529 aa8.54□□□□□ -1.04
HMGB1P51-201ENST00000605166 RPLP1P05386 114 aaKnown RBP8.54□□□□□ -1.04
HMGB1P51-201ENST00000605166 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.54□□□□□ -1.04
HMGB1P51-201ENST00000605166 ZNF76P36508 570 aa8.53□□□□□ -1.04
HMGB1P51-201ENST00000605166 HIF1AQ16665 826 aa8.53□□□□□ -1.04
HMGB1P51-201ENST00000605166 LCE2AQ5TA79 106 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P51-201ENST00000605166 TMEM214Q6NUQ4 689 aaKnown RBP8.53□□□□□ -1.04
HMGB1P51-201ENST00000605166 NUDT16Q96DE0 195 aaKnown RBP8.53□□□□□ -1.04
HMGB1P51-201ENST00000605166 CFHR5Q9BXR6 569 aa8.53□□□□□ -1.04
HMGB1P51-201ENST00000605166 TGIF2Q9GZN2 237 aa8.53□□□□□ -1.04
HMGB1P51-201ENST00000605166 DNAJC25Q9H1X3 360 aa8.53□□□□□ -1.04
HMGB1P51-201ENST00000605166 RELBQ01201 579 aa8.52□□□□□ -1.05
HMGB1P51-201ENST00000605166 TTC16Q8NEE8 873 aa8.52□□□□□ -1.05
HMGB1P51-201ENST00000605166 GPR152Q8TDT2 470 aa8.52□□□□□ -1.05
HMGB1P51-201ENST00000605166 AGBL1Q96MI9 1066 aa8.52□□□□□ -1.05
HMGB1P51-201ENST00000605166 H3BM21 787 aa8.51□□□□□ -1.05
HMGB1P51-201ENST00000605166 EIF1AYO14602 144 aaKnown RBP8.51□□□□□ -1.05
HMGB1P51-201ENST00000605166 GPC1P35052 558 aa8.51□□□□□ -1.05
HMGB1P51-201ENST00000605166 TXLNAP40222 546 aa8.51□□□□□ -1.05
HMGB1P51-201ENST00000605166 INSM1Q01101 510 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P51-201ENST00000605166 ORC1Q13415 861 aa8.51□□□□□ -1.05
HMGB1P51-201ENST00000605166 GNASQ5JWF2 1037 aa8.51□□□□□ -1.05
HMGB1P51-201ENST00000605166 CRELD1Q96HD1 420 aa8.51□□□□□ -1.05
HMGB1P51-201ENST00000605166 AK5Q9Y6K8 562 aa8.51□□□□□ -1.05
HMGB1P51-201ENST00000605166 TGFBR3LH3BV60 316 aa8.5□□□□□ -1.05
HMGB1P51-201ENST00000605166 TINF2Q9BSI4 451 aa8.5□□□□□ -1.05
HMGB1P51-201ENST00000605166 GGNBP2Q9H3C7 697 aa8.5□□□□□ -1.05
HMGB1P51-201ENST00000605166 PPP1R1BQ9UD71 204 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P51-201ENST00000605166 SPG7Q9UQ90 795 aa8.5□□□□□ -1.05
HMGB1P51-201ENST00000605166 BCS1LQ9Y276 419 aa8.5□□□□□ -1.05
HMGB1P51-201ENST00000605166 SOBPA7XYQ1 873 aa8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 WIPF1O43516 503 aa8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 MICAL2O94851 1124 aa8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 C8orf34Q49A92 452 aa8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 SLC43A3Q8NBI5 491 aa8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 RHPN1Q8TCX5 695 aa8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 GRIP2Q9C0E4 1043 aa8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 CCSER2Q9H7U1 834 aa8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 ZNF395Q9H8N7 513 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 POLMQ9NP87 494 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 ZDHHC3Q9NYG2 299 aa8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 DNMT3LQ9UJW3 386 aa8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 GPC6Q9Y625 555 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P51-201ENST00000605166 FIGNL2A6NMB9 653 aa8.48□□□□□ -1.05
HMGB1P51-201ENST00000605166 CPNE3O75131 537 aaKnown RBP8.48□□□□□ -1.05
HMGB1P51-201ENST00000605166 PLA2G4AP47712 749 aa8.48□□□□□ -1.05
HMGB1P51-201ENST00000605166 NBPF1Q3BBV0 1214 aa8.48□□□□□ -1.05
HMGB1P51-201ENST00000605166 IER5Q5VY09 327 aa8.48□□□□□ -1.05
HMGB1P51-201ENST00000605166 HMGB1P09429 215 aaKnown RBP8.47□□□□□ -1.05
HMGB1P51-201ENST00000605166 CTSHP09668 335 aa8.47□□□□□ -1.05
HMGB1P51-201ENST00000605166 C4orf17Q53FE4 359 aa8.47□□□□□ -1.05
HMGB1P51-201ENST00000605166 SLC27A3Q5K4L6 730 aa8.47□□□□□ -1.05
HMGB1P51-201ENST00000605166 FAM177A1Q8N128 213 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P51-201ENST00000605166 C7orf43Q8WVR3 580 aa8.47□□□□□ -1.05
HMGB1P51-201ENST00000605166 INSM2Q96T92 566 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P51-201ENST00000605166 A6NHS1 94 aa8.46□□□□□ -1.06
HMGB1P51-201ENST00000605166 EIF4BP23588 611 aaKnown RBP8.46□□□□□ -1.06
HMGB1P51-201ENST00000605166 VEGFBP49765 207 aa8.46□□□□□ -1.06
HMGB1P51-201ENST00000605166 RNF144AP50876 292 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P51-201ENST00000605166 PUS7Q96PZ0 661 aaKnown RBP8.46□□□□□ -1.06
HMGB1P51-201ENST00000605166 TANGO6Q9C0B7 1094 aa8.46□□□□□ -1.06
HMGB1P51-201ENST00000605166 CAPN10Q9HC96 672 aa8.46□□□□□ -1.06
HMGB1P51-201ENST00000605166 NLRP2Q9NX02 1062 aa8.46□□□□□ -1.06
HMGB1P51-201ENST00000605166 DMGDHQ9UI17 866 aaKnown RBP8.46□□□□□ -1.06
HMGB1P51-201ENST00000605166 OPLAHO14841 1288 aa8.45□□□□□ -1.06
HMGB1P51-201ENST00000605166 GIPC1O14908 333 aa8.45□□□□□ -1.06
HMGB1P51-201ENST00000605166 CTSOP43234 321 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P51-201ENST00000605166 GNL2Q13823 731 aaKnown RBP8.45□□□□□ -1.06
HMGB1P51-201ENST00000605166 XKR5Q6UX68 686 aa8.45□□□□□ -1.06
HMGB1P51-201ENST00000605166 SUSD3Q96L08 255 aa8.45□□□□□ -1.06
HMGB1P51-201ENST00000605166 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P51-201ENST00000605166 SPATA31C2B4DYI2 1134 aa8.44□□□□□ -1.06
HMGB1P51-201ENST00000605166 PPFIA3O75145 1194 aa8.44□□□□□ -1.06
HMGB1P51-201ENST00000605166 TATP17735 454 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P51-201ENST00000605166 IDH3AP50213 366 aa8.44□□□□□ -1.06
HMGB1P51-201ENST00000605166 PTSQ03393 145 aa8.44□□□□□ -1.06
HMGB1P51-201ENST00000605166 NBPF10Q6P3W6 841 aaKnown RBP8.44□□□□□ -1.06
HMGB1P51-201ENST00000605166 AIDAQ96BJ3 306 aa8.44□□□□□ -1.06
HMGB1P51-201ENST00000605166 ACBD3Q9H3P7 528 aa8.44□□□□□ -1.06
HMGB1P51-201ENST00000605166 ANKIB1Q9P2G1 1089 aa8.44□□□□□ -1.06
HMGB1P51-201ENST00000605166 FNDC3AQ9Y2H6 1198 aaKnown RBP8.44□□□□□ -1.06
HMGB1P51-201ENST00000605166 TNFRSF21O75509 655 aa8.43□□□□□ -1.06
HMGB1P51-201ENST00000605166 CANXP27824 592 aaKnown RBP8.43□□□□□ -1.06
HMGB1P51-201ENST00000605166 ARSDP51689 593 aa8.43□□□□□ -1.06
HMGB1P51-201ENST00000605166 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.43□□□□□ -1.06
HMGB1P51-201ENST00000605166 PDE12Q6L8Q7 609 aaKnown RBP8.43□□□□□ -1.06
HMGB1P51-201ENST00000605166 SNX29Q8TEQ0 813 aa8.43□□□□□ -1.06
HMGB1P51-201ENST00000605166 C12orf49Q9H741 205 aa8.43□□□□□ -1.06
HMGB1P51-201ENST00000605166 PRKAG2Q9UGJ0 569 aa8.43□□□□□ -1.06
HMGB1P51-201ENST00000605166 FAM181BA6NEQ2 426 aa8.42□□□□□ -1.06
HMGB1P51-201ENST00000605166 VSIG8P0DPA2 414 aa8.42□□□□□ -1.06
HMGB1P51-201ENST00000605166 HSP90B1P14625 803 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms